CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = L140S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2140L140SL320SnonsynCTCTCG630.51223-1225
ORF1ab/nsp2140L140SL320SnonsynCTCTCA620.3333331223-1225
ORF1ab/nsp2140L140SL320SnonsynCTcTCc610.1666671223-1225

Details of the mutation L140S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2140L140SCTCTCG36All0.000001
ORF1ab/nsp2140L140SCTCTCA26All0
ORF1ab/nsp2140L140SCTcTCc16All0
ORF1ab/nsp2140L140SCTCTCA240.111111
ORF1ab/nsp2140L140SCTCTCG240.111111
ORF1ab/nsp2140L140SCTcTCc11AY.440.000006
ORF1ab/nsp2140L140SCTCTCG11AY.990.001049