CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = K557T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2557K557TK737TnonsynaAaaCa30270.92474-2476
ORF1ab/nsp2557K557TK737TnonsynaAAaCT3020.06666672474-2476
ORF1ab/nsp2557K557TK737TnonsynaAAaCC3010.03333332474-2476

Details of the mutation K557T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2557K557TaAaaCa2730All0.000005
ORF1ab/nsp2557K557TaAAaCT230All0
ORF1ab/nsp2557K557TaAAaCC130All0
ORF1ab/nsp2557K557TaAaaCa1818B.1.617.20.000068
ORF1ab/nsp2557K557TaAaaCa240.111111
ORF1ab/nsp2557K557TaAAaCT240.111111
ORF1ab/nsp2557K557TaAaaCa22AY.40.000003
ORF1ab/nsp2557K557TaAaaCa12AY.98.10.000048
ORF1ab/nsp2557K557TaAAaCC12AY.98.10.000048
ORF1ab/nsp2557K557TaAaaCa11AY.1020.000027
ORF1ab/nsp2557K557TaAaaCa11AY.200.000039
ORF1ab/nsp2557K557TaAaaCa11B.1.10.000018
ORF1ab/nsp2557K557TaAaaCa11B.1.1.70.000001