CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = K554del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2554K554del1K734del1delAaa-aa870.8752465-2467
ORF1ab/nsp2554K554del1K734del1delaaAaa-810.1252465-2467

Details of the mutation K554del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2554K554del1Aaa-aa78All0.000001
ORF1ab/nsp2554K554del1aaAaa-18All0
ORF1ab/nsp2554K554del1Aaa-aa11AY.230.00007
ORF1ab/nsp2554K554del1Aaa-aa11AY.260.000028
ORF1ab/nsp2554K554del1Aaa-aa11B.10.000009
ORF1ab/nsp2554K554del1Aaa-aa11B.1.1.2260.005814
ORF1ab/nsp2554K554del1Aaa-aa11B.1.1.3630.005988
ORF1ab/nsp2554K554del1aaAaa-11B.1.177.570.000281
ORF1ab/nsp2554K554del1Aaa-aa11B.1.5950.000261
ORF1ab/nsp2554K554del1Aaa-aa11B.1.6270.00202