CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = K554del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2554K554delK734deldelAAA---747412465-2467

Details of the mutation K554del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2554K554delAAA---7474All0.000014
ORF1ab/nsp2554K554delAAA---1616B.1.1.70.000014
ORF1ab/nsp2554K554delAAA---77B.10.000064
ORF1ab/nsp2554K554delAAA---440.222222
ORF1ab/nsp2554K554delAAA---33AY.40.000005
ORF1ab/nsp2554K554delAAA---33B.1.10.000054
ORF1ab/nsp2554K554delAAA---33B.1.1.330.001263
ORF1ab/nsp2554K554delAAA---33B.1.617.20.000011
ORF1ab/nsp2554K554delAAA---22AY.250.000012
ORF1ab/nsp2554K554delAAA---22AY.430.000009
ORF1ab/nsp2554K554delAAA---22AY.46.60.000144
ORF1ab/nsp2554K554delAAA---22B.1.1.3480.001592
ORF1ab/nsp2554K554delAAA---22B.1.4240.016129
ORF1ab/nsp2554K554delAAA---22B.1.4290.000047
ORF1ab/nsp2554K554delAAA---22N.60.014184
ORF1ab/nsp2554K554delAAA---11AY.1080.001103
ORF1ab/nsp2554K554delAAA---11AY.1130.000142
ORF1ab/nsp2554K554delAAA---11AY.30.00001
ORF1ab/nsp2554K554delAAA---11AY.420.00004
ORF1ab/nsp2554K554delAAA---11AY.840.000437
ORF1ab/nsp2554K554delAAA---11AY.9.20.000037
ORF1ab/nsp2554K554delAAA---11AY.990.001049
ORF1ab/nsp2554K554delAAA---11B.1.1.4160.000905
ORF1ab/nsp2554K554delAAA---11B.1.1.4480.002033
ORF1ab/nsp2554K554delAAA---11B.1.1770.000013
ORF1ab/nsp2554K554delAAA---11B.1.177.540.000606
ORF1ab/nsp2554K554delAAA---11B.1.177.830.001481
ORF1ab/nsp2554K554delAAA---11B.1.1790.003759
ORF1ab/nsp2554K554delAAA---11B.1.36.180.00042
ORF1ab/nsp2554K554delAAA---11B.1.5610.000397
ORF1ab/nsp2554K554delAAA---11B.1.617.30.002985
ORF1ab/nsp2554K554delAAA---11B.1.6210.000089
ORF1ab/nsp2554K554delAAA---11B.340.013699
ORF1ab/nsp2554K554delAAA---11B.570.015152
ORF1ab/nsp2554K554delAAA---11P.10.000016
ORF1ab/nsp2554K554delAAA---11P.20.000187