CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = K554R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2554K554RK734RnonsynaAaaGa1671660.9940122465-2467
ORF1ab/nsp2554K554RK734RnonsynAAaCGa16710.005988022465-2467

Details of the mutation K554R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2554K554RaAaaGa166167All0.000032
ORF1ab/nsp2554K554RAAaCGa1167All0
ORF1ab/nsp2554K554RaAaaGa6262B.1.4440.984127
ORF1ab/nsp2554K554RaAaaGa2425B.1.1.70.000021
ORF1ab/nsp2554K554RAAaCGa125B.1.1.70.000001
ORF1ab/nsp2554K554RaAaaGa1717B.10.000156
ORF1ab/nsp2554K554RaAaaGa1111AY.1170.00093
ORF1ab/nsp2554K554RaAaaGa99AY.40.000014
ORF1ab/nsp2554K554RaAaaGa55B.1.177.200.007587
ORF1ab/nsp2554K554RaAaaGa44AY.330.000267
ORF1ab/nsp2554K554RaAaaGa33B.1.10.000054
ORF1ab/nsp2554K554RaAaaGa33B.1.1.3190.052632
ORF1ab/nsp2554K554RaAaaGa33B.1.1190.031579
ORF1ab/nsp2554K554RaAaaGa33B.1.177.450.001144
ORF1ab/nsp2554K554RaAaaGa33B.1.5540.013216
ORF1ab/nsp2554K554RaAaaGa33B.1.617.20.000011
ORF1ab/nsp2554K554RaAaaGa33P.10.000047
ORF1ab/nsp2554K554RaAaaGa22AY.1190.000071
ORF1ab/nsp2554K554RaAaaGa11AY.1020.000027
ORF1ab/nsp2554K554RaAaaGa11AY.1030.000006
ORF1ab/nsp2554K554RaAaaGa11AY.1130.000142
ORF1ab/nsp2554K554RaAaaGa11AY.30.00001
ORF1ab/nsp2554K554RaAaaGa11AY.430.000004
ORF1ab/nsp2554K554RaAaaGa11AY.440.000006
ORF1ab/nsp2554K554RaAaaGa11AY.450.000122
ORF1ab/nsp2554K554RaAaaGa11B.1.1770.000013
ORF1ab/nsp2554K554RaAaaGa11B.1.3510.00003
ORF1ab/nsp2554K554RaAaaGa11B.1.595.40.007299
ORF1ab/nsp2554K554RaAaaGa11B.1.617.10.000129