CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = K489N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2489K489NK669NnonsynaaGaaT847566330.7826552270-2272
ORF1ab/nsp2489K489NK669NnonsynaaGaaC847518420.2173452270-2272

Details of the mutation K489N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2489K489NaaGaaT66338475All0.001269
ORF1ab/nsp2489K489NaaGaaC18428475All0.000352
ORF1ab/nsp2489K489NaaGaaT27492750AY.410.808054
ORF1ab/nsp2489K489NaaGaaC12750AY.410.000294
ORF1ab/nsp2489K489NaaGaaC16381638AY.10.648199
ORF1ab/nsp2489K489NaaGaaT9721013B.1.617.20.00366
ORF1ab/nsp2489K489NaaGaaC411013B.1.617.20.000154
ORF1ab/nsp2489K489NaaGaaT583592B.1.1.70.000522
ORF1ab/nsp2489K489NaaGaaC9592B.1.1.70.000008
ORF1ab/nsp2489K489NaaGaaT538538AY.1110.098535
ORF1ab/nsp2489K489NaaGaaT377379AY.430.00167
ORF1ab/nsp2489K489NaaGaaC2379AY.430.000009
ORF1ab/nsp2489K489NaaGaaT200205AY.250.001203
ORF1ab/nsp2489K489NaaGaaC5205AY.250.00003
ORF1ab/nsp2489K489NaaGaaT171173AY.1020.004534
ORF1ab/nsp2489K489NaaGaaC2173AY.1020.000053
ORF1ab/nsp2489K489NaaGaaT119120AY.440.000724
ORF1ab/nsp2489K489NaaGaaC1120AY.440.000006
ORF1ab/nsp2489K489NaaGaaT98100AY.40.000153
ORF1ab/nsp2489K489NaaGaaC2100AY.40.000003
ORF1ab/nsp2489K489NaaGaaT9092AY.1030.000559
ORF1ab/nsp2489K489NaaGaaC292AY.1030.000012
ORF1ab/nsp2489K489NaaGaaT6868B.1.1770.000895
ORF1ab/nsp2489K489NaaGaaT5656B.1.1.1760.024605
ORF1ab/nsp2489K489NaaGaaT5252B.1.2580.00346
ORF1ab/nsp2489K489NaaGaaC3439AY.1170.002874
ORF1ab/nsp2489K489NaaGaaT539AY.1170.000423
ORF1ab/nsp2489K489NaaGaaC3737AY.690.006907
ORF1ab/nsp2489K489NaaGaaT2432AY.390.000593
ORF1ab/nsp2489K489NaaGaaC832AY.390.000198
ORF1ab/nsp2489K489NaaGaaT2425AY.840.010499
ORF1ab/nsp2489K489NaaGaaC125AY.840.000437
ORF1ab/nsp2489K489NaaGaaT2525P.10.000394
ORF1ab/nsp2489K489NaaGaaT2323B.1.20.000203
ORF1ab/nsp2489K489NaaGaaT2021B.10.000183
ORF1ab/nsp2489K489NaaGaaC121B.10.000009
ORF1ab/nsp2489K489NaaGaaT1418AY.460.001457
ORF1ab/nsp2489K489NaaGaaC418AY.460.000416
ORF1ab/nsp2489K489NaaGaaC1016AY.330.000668
ORF1ab/nsp2489K489NaaGaaT616AY.330.000401
ORF1ab/nsp2489K489NaaGaaT1616P.1.140.000765
ORF1ab/nsp2489K489NaaGaaT1313AY.60.000535
ORF1ab/nsp2489K489NaaGaaT1313B.1.1.5190.000516
ORF1ab/nsp2489K489NaaGaaT1313B.1.2410.010552
ORF1ab/nsp2489K489NaaGaaT1212AY.200.000466
ORF1ab/nsp2489K489NaaGaaT1011AY.50.000206
ORF1ab/nsp2489K489NaaGaaC111AY.50.000021
ORF1ab/nsp2489K489NaaGaaT1111Q.10.00139
ORF1ab/nsp2489K489NaaGaaT810AY.920.002298
ORF1ab/nsp2489K489NaaGaaC210AY.920.000575
ORF1ab/nsp2489K489NaaGaaT1010AY.98.10.000484
ORF1ab/nsp2489K489NaaGaaT1010B.1.258.120.07874
ORF1ab/nsp2489K489NaaGaaT99AY.340.000873
ORF1ab/nsp2489K489NaaGaaT99AY.830.015517
ORF1ab/nsp2489K489NaaGaaT99AY.880.007958
ORF1ab/nsp2489K489NaaGaaT89D.20.0006
ORF1ab/nsp2489K489NaaGaaC19D.20.000075
ORF1ab/nsp2489K489NaaGaaT99R.10.00081
ORF1ab/nsp2489K489NaaGaaC48AY.1180.000251
ORF1ab/nsp2489K489NaaGaaT48AY.1180.000251
ORF1ab/nsp2489K489NaaGaaT88B.1.617.30.023881
ORF1ab/nsp2489K489NaaGaaT77AY.1000.000322
ORF1ab/nsp2489K489NaaGaaT77AY.30.00007
ORF1ab/nsp2489K489NaaGaaT77AY.5.40.001937
ORF1ab/nsp2489K489NaaGaaT77Q.80.001154
ORF1ab/nsp2489K489NaaGaaT66AY.1190.000212
ORF1ab/nsp2489K489NaaGaaT56AY.230.000349
ORF1ab/nsp2489K489NaaGaaC16AY.230.00007
ORF1ab/nsp2489K489NaaGaaT66AY.290.000095
ORF1ab/nsp2489K489NaaGaaT46AY.450.000487
ORF1ab/nsp2489K489NaaGaaC26AY.450.000243
ORF1ab/nsp2489K489NaaGaaT66B.1.360.000875
ORF1ab/nsp2489K489NaaGaaT55A.2.50.002495
ORF1ab/nsp2489K489NaaGaaT55AY.380.002496
ORF1ab/nsp2489K489NaaGaaT55AY.46.10.005133
ORF1ab/nsp2489K489NaaGaaC45AY.620.001743
ORF1ab/nsp2489K489NaaGaaT15AY.620.000436
ORF1ab/nsp2489K489NaaGaaT35AY.750.000168
ORF1ab/nsp2489K489NaaGaaC25AY.750.000112
ORF1ab/nsp2489K489NaaGaaT55B.1.10.000091
ORF1ab/nsp2489K489NaaGaaT55B.1.3510.000149
ORF1ab/nsp2489K489NaaGaaT35B.1.5260.000071
ORF1ab/nsp2489K489NaaGaaC25B.1.5260.000047
ORF1ab/nsp2489K489NaaGaaT34AY.1130.000427
ORF1ab/nsp2489K489NaaGaaC14AY.1130.000142
ORF1ab/nsp2489K489NaaGaaT44AY.1160.001147
ORF1ab/nsp2489K489NaaGaaT34AY.120.000948
ORF1ab/nsp2489K489NaaGaaC14AY.120.000316
ORF1ab/nsp2489K489NaaGaaT34AY.1200.000112
ORF1ab/nsp2489K489NaaGaaC14AY.1200.000037
ORF1ab/nsp2489K489NaaGaaT24AY.260.000057
ORF1ab/nsp2489K489NaaGaaC24AY.260.000057
ORF1ab/nsp2489K489NaaGaaT34AY.34.10.00153
ORF1ab/nsp2489K489NaaGaaC14AY.34.10.00051
ORF1ab/nsp2489K489NaaGaaT44AY.360.000593
ORF1ab/nsp2489K489NaaGaaT34AY.5.30.001012
ORF1ab/nsp2489K489NaaGaaC14AY.5.30.000337
ORF1ab/nsp2489K489NaaGaaT34AY.540.000286
ORF1ab/nsp2489K489NaaGaaC14AY.540.000095
ORF1ab/nsp2489K489NaaGaaT34AY.670.001393
ORF1ab/nsp2489K489NaaGaaC14AY.670.000464
ORF1ab/nsp2489K489NaaGaaT44AY.740.000463
ORF1ab/nsp2489K489NaaGaaT44AY.770.00451
ORF1ab/nsp2489K489NaaGaaT44AY.890.019608
ORF1ab/nsp2489K489NaaGaaT44AY.99.20.000369
ORF1ab/nsp2489K489NaaGaaT44B.1.5960.000349
ORF1ab/nsp2489K489NaaGaaT33AY.1210.000406
ORF1ab/nsp2489K489NaaGaaT33AY.610.000314
ORF1ab/nsp2489K489NaaGaaT33B.1.1.2140.000166
ORF1ab/nsp2489K489NaaGaaT33B.1.1.2840.000322
ORF1ab/nsp2489K489NaaGaaT33B.1.1.3110.001074
ORF1ab/nsp2489K489NaaGaaT33B.1.36.180.001261
ORF1ab/nsp2489K489NaaGaaT33B.1.3670.002377
ORF1ab/nsp2489K489NaaGaaT33B.1.4090.002344
ORF1ab/nsp2489K489NaaGaaT33B.1.5700.008824
ORF1ab/nsp2489K489NaaGaaT33C.20.048387
ORF1ab/nsp2489K489NaaGaaT33P.1.170.000485
ORF1ab/nsp2489K489NaaGaaT33P.1.70.000958
ORF1ab/nsp2489K489NaaGaaT22AY.1080.002205
ORF1ab/nsp2489K489NaaGaaT22AY.120.20.002571
ORF1ab/nsp2489K489NaaGaaT12AY.130.000161
ORF1ab/nsp2489K489NaaGaaC12AY.130.000161
ORF1ab/nsp2489K489NaaGaaT22AY.3.10.000171
ORF1ab/nsp2489K489NaaGaaT22AY.420.00008
ORF1ab/nsp2489K489NaaGaaT22AY.46.40.000329
ORF1ab/nsp2489K489NaaGaaC12AY.470.000031
ORF1ab/nsp2489K489NaaGaaT12AY.470.000031
ORF1ab/nsp2489K489NaaGaaT22AY.590.001059
ORF1ab/nsp2489K489NaaGaaT22AY.650.001066
ORF1ab/nsp2489K489NaaGaaC12AY.730.000665
ORF1ab/nsp2489K489NaaGaaT12AY.730.000665
ORF1ab/nsp2489K489NaaGaaT22AY.9.20.000073
ORF1ab/nsp2489K489NaaGaaT22AZ.20.001642
ORF1ab/nsp2489K489NaaGaaT22B.1.1.2220.000408
ORF1ab/nsp2489K489NaaGaaT22B.1.1.3750.02381
ORF1ab/nsp2489K489NaaGaaT22B.1.1.390.001019
ORF1ab/nsp2489K489NaaGaaT22B.1.2400.000431
ORF1ab/nsp2489K489NaaGaaT22B.1.3690.00057
ORF1ab/nsp2489K489NaaGaaT22B.1.5650.001621
ORF1ab/nsp2489K489NaaGaaT22B.1.5750.000607
ORF1ab/nsp2489K489NaaGaaT22B.1.6210.000177
ORF1ab/nsp2489K489NaaGaaT22B.1.6370.000146
ORF1ab/nsp2489K489NaaGaaT22C.370.000232
ORF1ab/nsp2489K489NaaGaaT22P.20.000373
ORF1ab/nsp2489K489NaaGaaT110.055556
ORF1ab/nsp2489K489NaaGaaT11AD.20.000219
ORF1ab/nsp2489K489NaaGaaC11AY.1050.000643
ORF1ab/nsp2489K489NaaGaaC11AY.160.00038
ORF1ab/nsp2489K489NaaGaaT11AY.16.10.00047
ORF1ab/nsp2489K489NaaGaaC11AY.190.00114
ORF1ab/nsp2489K489NaaGaaC11AY.220.002092
ORF1ab/nsp2489K489NaaGaaT11AY.240.000431
ORF1ab/nsp2489K489NaaGaaT11AY.4.20.000022
ORF1ab/nsp2489K489NaaGaaC11AY.4.50.000107
ORF1ab/nsp2489K489NaaGaaT11AY.46.20.000635
ORF1ab/nsp2489K489NaaGaaC11AY.510.000909
ORF1ab/nsp2489K489NaaGaaC11AY.560.001605
ORF1ab/nsp2489K489NaaGaaT11AY.600.000938
ORF1ab/nsp2489K489NaaGaaT11AY.680.000274
ORF1ab/nsp2489K489NaaGaaT11AY.700.000209
ORF1ab/nsp2489K489NaaGaaT11AY.75.10.00018
ORF1ab/nsp2489K489NaaGaaC11AY.780.001541
ORF1ab/nsp2489K489NaaGaaC11AY.820.001357
ORF1ab/nsp2489K489NaaGaaC11AY.850.000427
ORF1ab/nsp2489K489NaaGaaC11AY.870.000833
ORF1ab/nsp2489K489NaaGaaT11AY.950.000761
ORF1ab/nsp2489K489NaaGaaC11AY.980.000079
ORF1ab/nsp2489K489NaaGaaT11B0.000128
ORF1ab/nsp2489K489NaaGaaT11B.1.1.2550.00303
ORF1ab/nsp2489K489NaaGaaT11B.1.1.3040.002809
ORF1ab/nsp2489K489NaaGaaT11B.1.1.3520.03125
ORF1ab/nsp2489K489NaaGaaT11B.1.110.30.000718
ORF1ab/nsp2489K489NaaGaaT11B.1.1600.000031
ORF1ab/nsp2489K489NaaGaaT11B.1.177.330.001645
ORF1ab/nsp2489K489NaaGaaT11B.1.177.570.000281
ORF1ab/nsp2489K489NaaGaaT11B.1.177.810.000189
ORF1ab/nsp2489K489NaaGaaC11B.1.2210.000071
ORF1ab/nsp2489K489NaaGaaT11B.1.2320.000537
ORF1ab/nsp2489K489NaaGaaT11B.1.2340.000132
ORF1ab/nsp2489K489NaaGaaT11B.1.36.290.000517
ORF1ab/nsp2489K489NaaGaaT11B.1.4280.00102
ORF1ab/nsp2489K489NaaGaaT11B.1.4970.000315
ORF1ab/nsp2489K489NaaGaaT11B.1.5230.002451
ORF1ab/nsp2489K489NaaGaaT11B.1.6090.000479
ORF1ab/nsp2489K489NaaGaaT11B.1.6250.002353
ORF1ab/nsp2489K489NaaGaaT11C.360.000911
ORF1ab/nsp2489K489NaaGaaT11C.60.037037