CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = K45R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp245K45RK225RnonsynaAgaGg5465450.998168938-940
ORF1ab/nsp245K45RK225RnonsynaAGaGA54610.0018315938-940

Details of the mutation K45R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp245K45RaAgaGg545546All0.000104
ORF1ab/nsp245K45RaAGaGA1546All0
ORF1ab/nsp245K45RaAgaGg190190B.1.1.70.00017
ORF1ab/nsp245K45RaAgaGg5252AY.40.000081
ORF1ab/nsp245K45RaAgaGg3737B.1.20.000326
ORF1ab/nsp245K45RaAgaGg2525AY.1030.000155
ORF1ab/nsp245K45RaAgaGg2121B.1.5960.00183
ORF1ab/nsp245K45RaAgaGg1717B.10.000156
ORF1ab/nsp245K45RaAgaGg1616AY.4.20.000347
ORF1ab/nsp245K45RaAgaGg1616AY.430.000071
ORF1ab/nsp245K45RaAgaGg1616B.1.3510.000476
ORF1ab/nsp245K45RaAgaGg1616B.1.617.20.00006
ORF1ab/nsp245K45RaAgaGg1010B.1.5260.000235
ORF1ab/nsp245K45RaAgaGg99A.23.10.006338
ORF1ab/nsp245K45RaAgaGg99B.1.1.1410.018109
ORF1ab/nsp245K45RaAgaGg77AY.200.000272
ORF1ab/nsp245K45RaAgaGg77B.1.2210.000497
ORF1ab/nsp245K45RaAgaGg66P.10.000095
ORF1ab/nsp245K45RaAgaGg55AY.250.00003
ORF1ab/nsp245K45RaAgaGg55B.1.1.2200.009294
ORF1ab/nsp245K45RaAgaGg33AY.330.0002
ORF1ab/nsp245K45RaAgaGg33AY.50.000062
ORF1ab/nsp245K45RaAgaGg33AY.99.20.000276
ORF1ab/nsp245K45RaAgaGg33B.1.1.2160.002671
ORF1ab/nsp245K45RaAgaGg33B.1.3240.004815
ORF1ab/nsp245K45RaAgaGg33C.370.000348
ORF1ab/nsp245K45RaAgaGg120.055556
ORF1ab/nsp245K45RaAGaGA120.055556
ORF1ab/nsp245K45RaAgaGg22A0.000774
ORF1ab/nsp245K45RaAgaGg22AY.1020.000053
ORF1ab/nsp245K45RaAgaGg22AY.130.000322
ORF1ab/nsp245K45RaAgaGg22AY.30.00002
ORF1ab/nsp245K45RaAgaGg22AY.350.000466
ORF1ab/nsp245K45RaAgaGg22AY.4.50.000215
ORF1ab/nsp245K45RaAgaGg22B.1.1.3500.08
ORF1ab/nsp245K45RaAgaGg22B.1.1770.000026
ORF1ab/nsp245K45RaAgaGg22B.1.360.000292
ORF1ab/nsp245K45RaAgaGg22P.1.70.000639
ORF1ab/nsp245K45RaAgaGg11AY.1010.00049
ORF1ab/nsp245K45RaAgaGg11AY.1060.000335
ORF1ab/nsp245K45RaAgaGg11AY.1170.000085
ORF1ab/nsp245K45RaAgaGg11AY.1190.000035
ORF1ab/nsp245K45RaAgaGg11AY.1200.000037
ORF1ab/nsp245K45RaAgaGg11AY.160.00038
ORF1ab/nsp245K45RaAgaGg11AY.16.10.00047
ORF1ab/nsp245K45RaAgaGg11AY.260.000028
ORF1ab/nsp245K45RaAgaGg11AY.290.000016
ORF1ab/nsp245K45RaAgaGg11AY.3.10.000085
ORF1ab/nsp245K45RaAgaGg11AY.310.018519
ORF1ab/nsp245K45RaAgaGg11AY.360.000148
ORF1ab/nsp245K45RaAgaGg11AY.390.000025
ORF1ab/nsp245K45RaAgaGg11AY.470.000031
ORF1ab/nsp245K45RaAgaGg11AY.520.000814
ORF1ab/nsp245K45RaAgaGg11AY.540.000095
ORF1ab/nsp245K45RaAgaGg11AY.720.001361
ORF1ab/nsp245K45RaAgaGg11AY.740.000116
ORF1ab/nsp245K45RaAgaGg11AY.750.000056
ORF1ab/nsp245K45RaAgaGg11AY.9.10.000084
ORF1ab/nsp245K45RaAgaGg11AY.990.001049
ORF1ab/nsp245K45RaAgaGg11B0.000128
ORF1ab/nsp245K45RaAgaGg11B.1.10.000018
ORF1ab/nsp245K45RaAgaGg11B.1.1.3060.000438
ORF1ab/nsp245K45RaAgaGg11B.1.1.5190.00004
ORF1ab/nsp245K45RaAgaGg11B.1.110.30.000718
ORF1ab/nsp245K45RaAgaGg11B.1.1600.000031
ORF1ab/nsp245K45RaAgaGg11B.1.177.160.000664
ORF1ab/nsp245K45RaAgaGg11B.1.177.40.000211
ORF1ab/nsp245K45RaAgaGg11B.1.177.750.001041
ORF1ab/nsp245K45RaAgaGg11B.1.2340.000132
ORF1ab/nsp245K45RaAgaGg11B.1.2370.004975
ORF1ab/nsp245K45RaAgaGg11B.1.2580.000067
ORF1ab/nsp245K45RaAgaGg11B.1.3130.006579
ORF1ab/nsp245K45RaAgaGg11B.1.36.180.00042
ORF1ab/nsp245K45RaAgaGg11B.1.4270.00005
ORF1ab/nsp245K45RaAgaGg11B.1.4290.000024
ORF1ab/nsp245K45RaAgaGg11B.1.5580.004566
ORF1ab/nsp245K45RaAgaGg11B.1.5820.000491
ORF1ab/nsp245K45RaAgaGg11B.1.6250.002353
ORF1ab/nsp245K45RaAgaGg11B.6.60.000889
ORF1ab/nsp245K45RaAgaGg11R.10.00009