CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = I560del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2560I560delI740deldelATC---888812483-2485

Details of the mutation I560del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2560I560delATC---8888All0.000017
ORF1ab/nsp2560I560delATC---2020B.1.1.70.000018
ORF1ab/nsp2560I560delATC---55AY.40.000008
ORF1ab/nsp2560I560delATC---55B.10.000046
ORF1ab/nsp2560I560delATC---55B.1.617.20.000019
ORF1ab/nsp2560I560delATC---440.222222
ORF1ab/nsp2560I560delATC---33B.1.1.330.001263
ORF1ab/nsp2560I560delATC---22AY.250.000012
ORF1ab/nsp2560I560delATC---22AY.430.000009
ORF1ab/nsp2560I560delATC---22AY.50.000041
ORF1ab/nsp2560I560delATC---22B.1.10.000036
ORF1ab/nsp2560I560delATC---22B.1.1.3480.001592
ORF1ab/nsp2560I560delATC---22B.1.1770.000026
ORF1ab/nsp2560I560delATC---22B.1.4240.016129
ORF1ab/nsp2560I560delATC---22B.1.4290.000047
ORF1ab/nsp2560I560delATC---22N.60.014184
ORF1ab/nsp2560I560delATC---11AY.1080.001103
ORF1ab/nsp2560I560delATC---11AY.1130.000142
ORF1ab/nsp2560I560delATC---11AY.190.00114
ORF1ab/nsp2560I560delATC---11AY.30.00001
ORF1ab/nsp2560I560delATC---11AY.420.00004
ORF1ab/nsp2560I560delATC---11AY.440.000006
ORF1ab/nsp2560I560delATC---11AY.460.000104
ORF1ab/nsp2560I560delATC---11AY.46.60.000072
ORF1ab/nsp2560I560delATC---11AY.60.000041
ORF1ab/nsp2560I560delATC---11AY.840.000437
ORF1ab/nsp2560I560delATC---11AY.9.20.000037
ORF1ab/nsp2560I560delATC---11AY.990.001049
ORF1ab/nsp2560I560delATC---11B.1.1.4160.000905
ORF1ab/nsp2560I560delATC---11B.1.1.4480.002033
ORF1ab/nsp2560I560delATC---11B.1.177.430.001477
ORF1ab/nsp2560I560delATC---11B.1.177.570.000281
ORF1ab/nsp2560I560delATC---11B.1.177.830.001481
ORF1ab/nsp2560I560delATC---11B.1.1790.003759
ORF1ab/nsp2560I560delATC---11B.1.20.000009
ORF1ab/nsp2560I560delATC---11B.1.2210.000071
ORF1ab/nsp2560I560delATC---11B.1.258.30.001675
ORF1ab/nsp2560I560delATC---11B.1.36.180.00042
ORF1ab/nsp2560I560delATC---11B.1.5610.000397
ORF1ab/nsp2560I560delATC---11B.1.617.30.002985
ORF1ab/nsp2560I560delATC---11B.1.6210.000089
ORF1ab/nsp2560I560delATC---11B.570.015152
ORF1ab/nsp2560I560delATC---11P.10.000016
ORF1ab/nsp2560I560delATC---11P.20.000187