CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = I560T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2560I560TI740TnonsynaTcaCc21721712483-2485

Details of the mutation I560T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2560I560TaTcaCc217217All0.000042
ORF1ab/nsp2560I560TaTcaCc3131B.1.4270.001565
ORF1ab/nsp2560I560TaTcaCc2323AY.40.000036
ORF1ab/nsp2560I560TaTcaCc2222B.1.1.70.00002
ORF1ab/nsp2560I560TaTcaCc1717B.1.2580.001131
ORF1ab/nsp2560I560TaTcaCc1313B.1.20.000114
ORF1ab/nsp2560I560TaTcaCc77AY.46.60.000505
ORF1ab/nsp2560I560TaTcaCc77B.1.617.20.000026
ORF1ab/nsp2560I560TaTcaCc66AY.30.00006
ORF1ab/nsp2560I560TaTcaCc66B.10.000055
ORF1ab/nsp2560I560TaTcaCc66B.1.1.5190.000238
ORF1ab/nsp2560I560TaTcaCc44AY.200.000155
ORF1ab/nsp2560I560TaTcaCc33AY.1030.000019
ORF1ab/nsp2560I560TaTcaCc33AY.430.000013
ORF1ab/nsp2560I560TaTcaCc33B.1.10.000054
ORF1ab/nsp2560I560TaTcaCc33B.1.1.370.000579
ORF1ab/nsp2560I560TaTcaCc33B.1.177.810.000568
ORF1ab/nsp2560I560TaTcaCc33B.1.3510.000089
ORF1ab/nsp2560I560TaTcaCc33B.1.5750.00091
ORF1ab/nsp2560I560TaTcaCc33P.20.00056
ORF1ab/nsp2560I560TaTcaCc22AY.300.000791
ORF1ab/nsp2560I560TaTcaCc22AY.470.000062
ORF1ab/nsp2560I560TaTcaCc22AY.980.000158
ORF1ab/nsp2560I560TaTcaCc22AY.98.10.000097
ORF1ab/nsp2560I560TaTcaCc22AY.99.20.000184
ORF1ab/nsp2560I560TaTcaCc22B.1.160.140.004237
ORF1ab/nsp2560I560TaTcaCc22B.1.1770.000026
ORF1ab/nsp2560I560TaTcaCc22B.1.177.210.000153
ORF1ab/nsp2560I560TaTcaCc22B.1.617.10.000258
ORF1ab/nsp2560I560TaTcaCc22P.10.000032
ORF1ab/nsp2560I560TaTcaCc22P.50.027397
ORF1ab/nsp2560I560TaTcaCc11A.2.50.000499
ORF1ab/nsp2560I560TaTcaCc11AY.10.000396
ORF1ab/nsp2560I560TaTcaCc11AY.1000.000046
ORF1ab/nsp2560I560TaTcaCc11AY.1020.000027
ORF1ab/nsp2560I560TaTcaCc11AY.1090.00074
ORF1ab/nsp2560I560TaTcaCc11AY.1190.000035
ORF1ab/nsp2560I560TaTcaCc11AY.230.00007
ORF1ab/nsp2560I560TaTcaCc11AY.250.000006
ORF1ab/nsp2560I560TaTcaCc11AY.260.000028
ORF1ab/nsp2560I560TaTcaCc11AY.39.10.00004
ORF1ab/nsp2560I560TaTcaCc11AY.440.000006
ORF1ab/nsp2560I560TaTcaCc11AY.5.40.000277
ORF1ab/nsp2560I560TaTcaCc11AY.70.000196
ORF1ab/nsp2560I560TaTcaCc11AY.700.000209
ORF1ab/nsp2560I560TaTcaCc11AY.850.000427
ORF1ab/nsp2560I560TaTcaCc11AZ.30.00152
ORF1ab/nsp2560I560TaTcaCc11B.1.1.2730.006757
ORF1ab/nsp2560I560TaTcaCc11B.1.1.2890.002083
ORF1ab/nsp2560I560TaTcaCc11B.1.1.460.004367
ORF1ab/nsp2560I560TaTcaCc11B.1.1110.001175
ORF1ab/nsp2560I560TaTcaCc11B.1.1600.000031
ORF1ab/nsp2560I560TaTcaCc11B.1.177.440.000519
ORF1ab/nsp2560I560TaTcaCc11B.1.3060.005714
ORF1ab/nsp2560I560TaTcaCc11B.1.360.000146
ORF1ab/nsp2560I560TaTcaCc11B.1.4290.000024
ORF1ab/nsp2560I560TaTcaCc11B.1.438.10.000107
ORF1ab/nsp2560I560TaTcaCc11B.1.5090.000866
ORF1ab/nsp2560I560TaTcaCc11B.1.5640.000426
ORF1ab/nsp2560I560TaTcaCc11B.1.5960.000087