CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = I560I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2560I560II740IsynatCatT15678152980.9757622483-2485
ORF1ab/nsp2560I560II740IsynatCatA156783800.02423782483-2485

Details of the mutation I560I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2560I560IatCatT1529815678All0.002926
ORF1ab/nsp2560I560IatCatA38015678All0.000073
ORF1ab/nsp2560I560IatCatT29212936AY.40.004546
ORF1ab/nsp2560I560IatCatA152936AY.40.000023
ORF1ab/nsp2560I560IatCatT18291842B.1.1.70.001637
ORF1ab/nsp2560I560IatCatA131842B.1.1.70.000012
ORF1ab/nsp2560I560IatCatT10061006B.1.214.20.603118
ORF1ab/nsp2560I560IatCatT868868B.1.360.126641
ORF1ab/nsp2560I560IatCatT840840AY.1100.094659
ORF1ab/nsp2560I560IatCatT741742B.1.617.20.00279
ORF1ab/nsp2560I560IatCatA1742B.1.617.20.000004
ORF1ab/nsp2560I560IatCatT685685AY.39.10.027135
ORF1ab/nsp2560I560IatCatT497499AY.440.003025
ORF1ab/nsp2560I560IatCatA2499AY.440.000012
ORF1ab/nsp2560I560IatCatT467476AY.250.002809
ORF1ab/nsp2560I560IatCatA9476AY.250.000054
ORF1ab/nsp2560I560IatCatA296449AY.430.001311
ORF1ab/nsp2560I560IatCatT153449AY.430.000678
ORF1ab/nsp2560I560IatCatT375378B.1.20.003302
ORF1ab/nsp2560I560IatCatA3378B.1.20.000026
ORF1ab/nsp2560I560IatCatT283284AY.1030.001757
ORF1ab/nsp2560I560IatCatA1284AY.1030.000006
ORF1ab/nsp2560I560IatCatT270270B.1.2430.018788
ORF1ab/nsp2560I560IatCatT243244B.1.4290.005718
ORF1ab/nsp2560I560IatCatA1244B.1.4290.000024
ORF1ab/nsp2560I560IatCatT230231P.10.003623
ORF1ab/nsp2560I560IatCatA1231P.10.000016
ORF1ab/nsp2560I560IatCatT229229C.1.20.974468
ORF1ab/nsp2560I560IatCatT211213AY.30.002099
ORF1ab/nsp2560I560IatCatA2213AY.30.00002
ORF1ab/nsp2560I560IatCatT184185B.1.1770.002423
ORF1ab/nsp2560I560IatCatA1185B.1.1770.000013
ORF1ab/nsp2560I560IatCatT177177B.1.2580.011779
ORF1ab/nsp2560I560IatCatT166166AY.60.006827
ORF1ab/nsp2560I560IatCatT158159B.1.10.002866
ORF1ab/nsp2560I560IatCatA1159B.1.10.000018
ORF1ab/nsp2560I560IatCatT125128B.10.001145
ORF1ab/nsp2560I560IatCatA3128B.10.000027
ORF1ab/nsp2560I560IatCatT122122B.1.4270.006161
ORF1ab/nsp2560I560IatCatT119119B.1.1.5190.004726
ORF1ab/nsp2560I560IatCatT8787B.1.2210.00618
ORF1ab/nsp2560I560IatCatT8484B.1.4560.27451
ORF1ab/nsp2560I560IatCatT7070B.1.5610.027789
ORF1ab/nsp2560I560IatCatT6666B.1.3510.001962
ORF1ab/nsp2560I560IatCatT6565C.350.05031
ORF1ab/nsp2560I560IatCatT6364B.1.5260.001481
ORF1ab/nsp2560I560IatCatA164B.1.5260.000024
ORF1ab/nsp2560I560IatCatT6262R.10.005581
ORF1ab/nsp2560I560IatCatT5959AY.360.008745
ORF1ab/nsp2560I560IatCatT5050AY.4.20.001084
ORF1ab/nsp2560I560IatCatT4646AY.1020.00122
ORF1ab/nsp2560I560IatCatT4545AY.420.00181
ORF1ab/nsp2560I560IatCatT4242Q.70.046667
ORF1ab/nsp2560I560IatCatT4040AY.1190.001412
ORF1ab/nsp2560I560IatCatT4040B.1.621.10.020233
ORF1ab/nsp2560I560IatCatT3939AY.710.018527
ORF1ab/nsp2560I560IatCatT3536AY.260.000991
ORF1ab/nsp2560I560IatCatA136AY.260.000028
ORF1ab/nsp2560I560IatCatT3636AY.610.003772
ORF1ab/nsp2560I560IatCatT3434AY.50.000702
ORF1ab/nsp2560I560IatCatT3030B.1.1.2140.001664
ORF1ab/nsp2560I560IatCatT3030B.1.1600.000936
ORF1ab/nsp2560I560IatCatT3030C.36.3.10.081522
ORF1ab/nsp2560I560IatCatT2929AY.140.002552
ORF1ab/nsp2560I560IatCatT2829AY.390.000692
ORF1ab/nsp2560I560IatCatA129AY.390.000025
ORF1ab/nsp2560I560IatCatT2828AY.4.50.00301
ORF1ab/nsp2560I560IatCatT2727B.1.36.80.027
ORF1ab/nsp2560I560IatCatT2525AY.99.20.002304
ORF1ab/nsp2560I560IatCatT2324AY.750.001289
ORF1ab/nsp2560I560IatCatA124AY.750.000056
ORF1ab/nsp2560I560IatCatT2424B.1.5750.007282
ORF1ab/nsp2560I560IatCatT2424P.1.150.005576
ORF1ab/nsp2560I560IatCatT2223AY.450.002677
ORF1ab/nsp2560I560IatCatA123AY.450.000122
ORF1ab/nsp2560I560IatCatT2121AY.200.000816
ORF1ab/nsp2560I560IatCatT2121AY.640.0125
ORF1ab/nsp2560I560IatCatT2121B.1.1.2160.0187
ORF1ab/nsp2560I560IatCatT2121B.1.36.290.010864
ORF1ab/nsp2560I560IatCatT2121B.1.5960.00183
ORF1ab/nsp2560I560IatCatT2020B.1.2410.016234
ORF1ab/nsp2560I560IatCatT2020B.1.617.10.002579
ORF1ab/nsp2560I560IatCatT2020P.1.140.000956
ORF1ab/nsp2560I560IatCatT1818AY.470.00056
ORF1ab/nsp2560I560IatCatT1818B.1.1.10.00588
ORF1ab/nsp2560I560IatCatT1717AY.950.012938
ORF1ab/nsp2560I560IatCatT1617P.20.002986
ORF1ab/nsp2560I560IatCatA117P.20.000187
ORF1ab/nsp2560I560IatCatT1515AY.290.000237
ORF1ab/nsp2560I560IatCatT1515AY.740.001735
ORF1ab/nsp2560I560IatCatT1515B.1.160.90.107914
ORF1ab/nsp2560I560IatCatT1314AY.1000.000598
ORF1ab/nsp2560I560IatCatA114AY.1000.000046
ORF1ab/nsp2560I560IatCatT1414AY.730.009315
ORF1ab/nsp2560I560IatCatT1414B.1.1.280.004357
ORF1ab/nsp2560I560IatCatT1314B.1.438.10.001394
ORF1ab/nsp2560I560IatCatA114B.1.438.10.000107
ORF1ab/nsp2560I560IatCatT1013AY.330.000668
ORF1ab/nsp2560I560IatCatA313AY.330.0002
ORF1ab/nsp2560I560IatCatT1212AY.1110.002198
ORF1ab/nsp2560I560IatCatT1212AY.320.00639
ORF1ab/nsp2560I560IatCatT1212AY.46.40.001974
ORF1ab/nsp2560I560IatCatT1212B.1.258.170.001248
ORF1ab/nsp2560I560IatCatT1212B.1.6210.001062
ORF1ab/nsp2560I560IatCatT1212C.370.001393
ORF1ab/nsp2560I560IatCatT1111AK.20.5
ORF1ab/nsp2560I560IatCatT1111AY.230.000767
ORF1ab/nsp2560I560IatCatT811AY.540.000763
ORF1ab/nsp2560I560IatCatA311AY.540.000286
ORF1ab/nsp2560I560IatCatT1111AY.980.000869
ORF1ab/nsp2560I560IatCatT1111B.1.5950.002871
ORF1ab/nsp2560I560IatCatA610AY.1200.000223
ORF1ab/nsp2560I560IatCatT410AY.1200.000149
ORF1ab/nsp2560I560IatCatT1010B.1.1.3170.004117
ORF1ab/nsp2560I560IatCatT1010B.1.1.3500.4
ORF1ab/nsp2560I560IatCatT99A.23.10.006338
ORF1ab/nsp2560I560IatCatT99AY.1090.006657
ORF1ab/nsp2560I560IatCatT99AY.4.2.10.001341
ORF1ab/nsp2560I560IatCatT99B.1.36.260.025714
ORF1ab/nsp2560I560IatCatT99C.36.30.005105
ORF1ab/nsp2560I560IatCatT88AY.1170.000676
ORF1ab/nsp2560I560IatCatT88AY.570.005249
ORF1ab/nsp2560I560IatCatT88B.1.1.250.004548
ORF1ab/nsp2560I560IatCatT88B.1.177.810.001515
ORF1ab/nsp2560I560IatCatT88B.1.5650.006483
ORF1ab/nsp2560I560IatCatT88Q.80.001319
ORF1ab/nsp2560I560IatCatT77AY.34.10.00357
ORF1ab/nsp2560I560IatCatT77AY.75.10.001262
ORF1ab/nsp2560I560IatCatT77B.1.36.190.064815
ORF1ab/nsp2560I560IatCatT77B.1.6090.003356
ORF1ab/nsp2560I560IatCatT66AY.1140.001387
ORF1ab/nsp2560I560IatCatT66AY.23.10.002504
ORF1ab/nsp2560I560IatCatT66AY.340.000582
ORF1ab/nsp2560I560IatCatT66AY.880.005305
ORF1ab/nsp2560I560IatCatT66AY.90.000406
ORF1ab/nsp2560I560IatCatT66AY.9.10.000502
ORF1ab/nsp2560I560IatCatT56B.1.1.3060.002192
ORF1ab/nsp2560I560IatCatA16B.1.1.3060.000438
ORF1ab/nsp2560I560IatCatT66B.1.177.210.000459
ORF1ab/nsp2560I560IatCatT66B.1.177.40.001266
ORF1ab/nsp2560I560IatCatT66B.1.2340.000792
ORF1ab/nsp2560I560IatCatT66B.1.2400.001293
ORF1ab/nsp2560I560IatCatT46B.1.5820.001963
ORF1ab/nsp2560I560IatCatA26B.1.5820.000981
ORF1ab/nsp2560I560IatCatT55AY.100.00265
ORF1ab/nsp2560I560IatCatT55AY.1130.000712
ORF1ab/nsp2560I560IatCatT45AY.240.001724
ORF1ab/nsp2560I560IatCatA15AY.240.000431
ORF1ab/nsp2560I560IatCatT55AY.460.00052
ORF1ab/nsp2560I560IatCatT55AY.7.10.000564
ORF1ab/nsp2560I560IatCatT55AY.840.002187
ORF1ab/nsp2560I560IatCatT55AY.9.20.000184
ORF1ab/nsp2560I560IatCatT55AY.900.003422
ORF1ab/nsp2560I560IatCatT55AY.930.001365
ORF1ab/nsp2560I560IatCatT55B.1.1.4860.007886
ORF1ab/nsp2560I560IatCatT55B.1.5230.012255
ORF1ab/nsp2560I560IatCatT55B.1.5250.000566
ORF1ab/nsp2560I560IatCatT55C.10.011962
ORF1ab/nsp2560I560IatCatT55Q.40.002274
ORF1ab/nsp2560I560IatCatT44AY.1010.001962
ORF1ab/nsp2560I560IatCatT44AY.1080.00441
ORF1ab/nsp2560I560IatCatT44AY.1180.000251
ORF1ab/nsp2560I560IatCatT44AY.120.001264
ORF1ab/nsp2560I560IatCatT44AY.270.000259
ORF1ab/nsp2560I560IatCatT44AY.670.001857
ORF1ab/nsp2560I560IatCatT44AY.700.000834
ORF1ab/nsp2560I560IatCatT44AY.98.10.000194
ORF1ab/nsp2560I560IatCatT24B0.000256
ORF1ab/nsp2560I560IatCatA24B0.000256
ORF1ab/nsp2560I560IatCatT44B.1.1.1760.001757
ORF1ab/nsp2560I560IatCatT44B.1.1.2220.000816
ORF1ab/nsp2560I560IatCatT44B.1.1.3180.001207
ORF1ab/nsp2560I560IatCatT44B.1.1640.059701
ORF1ab/nsp2560I560IatCatT44B.1.177.600.000874
ORF1ab/nsp2560I560IatCatT44B.1.177.860.000734
ORF1ab/nsp2560I560IatCatT44B.1.4090.003125
ORF1ab/nsp2560I560IatCatT33A0.001161
ORF1ab/nsp2560I560IatCatT33AD.20.000657
ORF1ab/nsp2560I560IatCatT33AY.1060.001005
ORF1ab/nsp2560I560IatCatT33AY.1070.001398
ORF1ab/nsp2560I560IatCatT33AY.1160.00086
ORF1ab/nsp2560I560IatCatT33AY.130.000483
ORF1ab/nsp2560I560IatCatT33AY.29.10.000662
ORF1ab/nsp2560I560IatCatT33AY.3.10.000256
ORF1ab/nsp2560I560IatCatT33AY.300.001187
ORF1ab/nsp2560I560IatCatT33AY.400.002893
ORF1ab/nsp2560I560IatCatT33AY.410.000882
ORF1ab/nsp2560I560IatCatT33AY.590.001589
ORF1ab/nsp2560I560IatCatT33AY.630.001161
ORF1ab/nsp2560I560IatCatT33B.1.1.100.003344
ORF1ab/nsp2560I560IatCatT33B.1.1.1890.004539
ORF1ab/nsp2560I560IatCatT33B.1.1.2200.005576
ORF1ab/nsp2560I560IatCatT33B.1.1.2840.000322
ORF1ab/nsp2560I560IatCatA33B.1.1.3370.010791
ORF1ab/nsp2560I560IatCatT33B.1.1.3480.002389
ORF1ab/nsp2560I560IatCatT33B.1.1.500.002037
ORF1ab/nsp2560I560IatCatT33B.1.1.540.009063
ORF1ab/nsp2560I560IatCatT33B.1.177.120.000455
ORF1ab/nsp2560I560IatCatT33B.1.177.570.000843
ORF1ab/nsp2560I560IatCatT33B.1.177.70.000495
ORF1ab/nsp2560I560IatCatT33B.1.177.750.003122
ORF1ab/nsp2560I560IatCatT33B.1.3750.002459
ORF1ab/nsp2560I560IatCatT33B.1.466.20.001174
ORF1ab/nsp2560I560IatCatT33B.1.5900.013636
ORF1ab/nsp2560I560IatCatT33C.60.111111
ORF1ab/nsp2560I560IatCatT33D.20.000225
ORF1ab/nsp2560I560IatCatT33P.1.170.000485
ORF1ab/nsp2560I560IatCatT22AE.80.000978
ORF1ab/nsp2560I560IatCatT22AY.10.000791
ORF1ab/nsp2560I560IatCatT22AY.150.004444
ORF1ab/nsp2560I560IatCatT22AY.380.000999
ORF1ab/nsp2560I560IatCatT22AY.46.10.002053
ORF1ab/nsp2560I560IatCatT22AY.46.60.000144
ORF1ab/nsp2560I560IatCatT22AY.5.40.000553
ORF1ab/nsp2560I560IatCatT22AY.530.000575
ORF1ab/nsp2560I560IatCatT22AY.550.001835
ORF1ab/nsp2560I560IatCatT22AY.600.001876
ORF1ab/nsp2560I560IatCatT22AY.690.000373
ORF1ab/nsp2560I560IatCatT22AY.860.00166
ORF1ab/nsp2560I560IatCatT22AY.99.10.003106
ORF1ab/nsp2560I560IatCatT22AZ.20.001642
ORF1ab/nsp2560I560IatCatT22B.1.1.2800.006173
ORF1ab/nsp2560I560IatCatT22B.1.1.3160.00185
ORF1ab/nsp2560I560IatCatT22B.1.1.330.000842
ORF1ab/nsp2560I560IatCatT22B.1.1.3350.025974
ORF1ab/nsp2560I560IatCatT22B.1.1.370.000386
ORF1ab/nsp2560I560IatCatT22B.1.1.3750.02381
ORF1ab/nsp2560I560IatCatT22B.1.1.3980.006452
ORF1ab/nsp2560I560IatCatT22B.1.1.4340.000697
ORF1ab/nsp2560I560IatCatT22B.1.1.700.000682
ORF1ab/nsp2560I560IatCatT22B.1.110.30.001437
ORF1ab/nsp2560I560IatCatT22B.1.177.410.005
ORF1ab/nsp2560I560IatCatT22B.1.177.730.001133
ORF1ab/nsp2560I560IatCatT22B.1.177.790.004684
ORF1ab/nsp2560I560IatCatT22B.1.177.830.002963
ORF1ab/nsp2560I560IatCatT22B.1.177.90.002663
ORF1ab/nsp2560I560IatCatT22B.1.1890.008584
ORF1ab/nsp2560I560IatCatT22B.1.214.30.014286
ORF1ab/nsp2560I560IatCatT22B.1.3050.004301
ORF1ab/nsp2560I560IatCatT22B.1.36.250.004415
ORF1ab/nsp2560I560IatCatT22B.1.36.310.003503
ORF1ab/nsp2560I560IatCatT22B.1.3960.001411
ORF1ab/nsp2560I560IatCatT22B.1.3980.005952
ORF1ab/nsp2560I560IatCatT22B.1.4040.002604
ORF1ab/nsp2560I560IatCatT22B.1.428.30.025641
ORF1ab/nsp2560I560IatCatT22B.1.5090.001732
ORF1ab/nsp2560I560IatCatT22B.1.5640.000852
ORF1ab/nsp2560I560IatCatT22B.1.6200.001892
ORF1ab/nsp2560I560IatCatT22B.1.6280.000705
ORF1ab/nsp2560I560IatCatT22B.110.010256
ORF1ab/nsp2560I560IatCatT22B.6.60.001778
ORF1ab/nsp2560I560IatCatT22P.1.70.000639
ORF1ab/nsp2560I560IatCatT22Q.30.00029
ORF1ab/nsp2560I560IatCatT11A.10.000282
ORF1ab/nsp2560I560IatCatT11A.190.009434
ORF1ab/nsp2560I560IatCatT11AM.40.003571
ORF1ab/nsp2560I560IatCatT11AT.10.005128
ORF1ab/nsp2560I560IatCatT11AY.1040.001984
ORF1ab/nsp2560I560IatCatT11AY.110.001339
ORF1ab/nsp2560I560IatCatT11AY.116.10.000311
ORF1ab/nsp2560I560IatCatT11AY.120.10.000321
ORF1ab/nsp2560I560IatCatT11AY.120.2.10.000498
ORF1ab/nsp2560I560IatCatT11AY.1210.000135
ORF1ab/nsp2560I560IatCatT11AY.160.00038
ORF1ab/nsp2560I560IatCatT11AY.170.008197
ORF1ab/nsp2560I560IatCatT11AY.350.000233
ORF1ab/nsp2560I560IatCatT11AY.370.000316
ORF1ab/nsp2560I560IatCatT11AY.4.40.000409
ORF1ab/nsp2560I560IatCatT11AY.46.20.000635
ORF1ab/nsp2560I560IatCatT11AY.46.50.000198
ORF1ab/nsp2560I560IatCatT11AY.480.000465
ORF1ab/nsp2560I560IatCatT11AY.5.30.000337
ORF1ab/nsp2560I560IatCatT11AY.520.000814
ORF1ab/nsp2560I560IatCatT11AY.560.001605
ORF1ab/nsp2560I560IatCatT11AY.580.000907
ORF1ab/nsp2560I560IatCatT11AY.620.000436
ORF1ab/nsp2560I560IatCatT11AY.650.000533
ORF1ab/nsp2560I560IatCatT11AY.680.000274
ORF1ab/nsp2560I560IatCatT11AY.7.20.000559
ORF1ab/nsp2560I560IatCatT11AY.720.001361
ORF1ab/nsp2560I560IatCatT11AY.800.001129
ORF1ab/nsp2560I560IatCatT11AY.850.000427
ORF1ab/nsp2560I560IatCatT11AY.870.000833
ORF1ab/nsp2560I560IatCatT11AY.920.000287
ORF1ab/nsp2560I560IatCatT11AY.990.001049
ORF1ab/nsp2560I560IatCatT11B.1.1.1320.014925
ORF1ab/nsp2560I560IatCatT11B.1.1.1710.003676
ORF1ab/nsp2560I560IatCatT11B.1.1.1740.003378
ORF1ab/nsp2560I560IatCatT11B.1.1.1770.019231
ORF1ab/nsp2560I560IatCatT11B.1.1.2310.003096
ORF1ab/nsp2560I560IatCatT11B.1.1.2540.011236
ORF1ab/nsp2560I560IatCatT11B.1.1.2690.001353
ORF1ab/nsp2560I560IatCatT11B.1.1.2770.000759
ORF1ab/nsp2560I560IatCatT11B.1.1.2940.001266
ORF1ab/nsp2560I560IatCatT11B.1.1.3040.002809
ORF1ab/nsp2560I560IatCatT11B.1.1.3110.000358
ORF1ab/nsp2560I560IatCatT11B.1.1.3260.001761
ORF1ab/nsp2560I560IatCatT11B.1.1.3530.020833
ORF1ab/nsp2560I560IatCatT11B.1.1.3720.000689
ORF1ab/nsp2560I560IatCatT11B.1.1.3770.001381
ORF1ab/nsp2560I560IatCatT11B.1.1.3780.007299
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