CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = I281I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2281I281II461IsynatCatT221222040.9963831646-1648
ORF1ab/nsp2281I281II461IsynatCatA221280.003616641646-1648

Details of the mutation I281I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2281I281IatCatT22042212All0.000422
ORF1ab/nsp2281I281IatCatA82212All0.000002
ORF1ab/nsp2281I281IatCatT11731174B.1.10.021279
ORF1ab/nsp2281I281IatCatA11174B.1.10.000018
ORF1ab/nsp2281I281IatCatT199200B.1.1.70.000178
ORF1ab/nsp2281I281IatCatA1200B.1.1.70.000001
ORF1ab/nsp2281I281IatCatT6262AY.40.000096
ORF1ab/nsp2281I281IatCatT6262B.1.1.2770.047041
ORF1ab/nsp2281I281IatCatT5757B.1.1.3380.982759
ORF1ab/nsp2281I281IatCatT5555B.1.1.3360.916667
ORF1ab/nsp2281I281IatCatT5454B.1.1.5220.931034
ORF1ab/nsp2281I281IatCatT5151AY.250.000307
ORF1ab/nsp2281I281IatCatT3838AY.450.004624
ORF1ab/nsp2281I281IatCatT3030AY.430.000133
ORF1ab/nsp2281I281IatCatT3030AY.440.000183
ORF1ab/nsp2281I281IatCatT2121B.1.617.20.000079
ORF1ab/nsp2281I281IatCatT2020B.1.20.000176
ORF1ab/nsp2281I281IatCatT1919B.1.1770.00025
ORF1ab/nsp2281I281IatCatT1818B.1.1.5190.000715
ORF1ab/nsp2281I281IatCatT1717B.1.1.3190.298246
ORF1ab/nsp2281I281IatCatT1616B.1.2580.001065
ORF1ab/nsp2281I281IatCatT1515B.10.000137
ORF1ab/nsp2281I281IatCatT1515B.1.1.10.0049
ORF1ab/nsp2281I281IatCatT1313P.10.000205
ORF1ab/nsp2281I281IatCatT1212AY.30.000119
ORF1ab/nsp2281I281IatCatT1212AY.850.005126
ORF1ab/nsp2281I281IatCatT1212B.1.6090.005753
ORF1ab/nsp2281I281IatCatT1010B.1.5260.000235
ORF1ab/nsp2281I281IatCatT99B.1.1.2690.012179
ORF1ab/nsp2281I281IatCatT99B.1.1.4090.025496
ORF1ab/nsp2281I281IatCatT88B.1.1.1170.07767
ORF1ab/nsp2281I281IatCatT88B.1.1.2240.114286
ORF1ab/nsp2281I281IatCatT77B.1.1.4470.25
ORF1ab/nsp2281I281IatCatT67B.1.2210.000426
ORF1ab/nsp2281I281IatCatA17B.1.2210.000071
ORF1ab/nsp2281I281IatCatT77B.1.351.20.002118
ORF1ab/nsp2281I281IatCatT55AY.980.000395
ORF1ab/nsp2281I281IatCatT55B.1.1.100.005574
ORF1ab/nsp2281I281IatCatT55B.1.1.1940.024752
ORF1ab/nsp2281I281IatCatT55C.370.00058
ORF1ab/nsp2281I281IatCatT44AY.200.000155
ORF1ab/nsp2281I281IatCatT44AY.260.000113
ORF1ab/nsp2281I281IatCatT44B.1.1.3170.001647
ORF1ab/nsp2281I281IatCatT44B.1.177.430.005908
ORF1ab/nsp2281I281IatCatT44B.1.351.30.003506
ORF1ab/nsp2281I281IatCatT44B.1.4290.000094
ORF1ab/nsp2281I281IatCatT33AY.4.40.001227
ORF1ab/nsp2281I281IatCatT33AY.460.000312
ORF1ab/nsp2281I281IatCatT22AY.1020.000053
ORF1ab/nsp2281I281IatCatT22AY.1030.000012
ORF1ab/nsp2281I281IatCatT22AY.1140.000462
ORF1ab/nsp2281I281IatCatT22AY.1160.000574
ORF1ab/nsp2281I281IatCatT22AY.140.000176
ORF1ab/nsp2281I281IatCatT22AY.270.000129
ORF1ab/nsp2281I281IatCatT22AY.290.000032
ORF1ab/nsp2281I281IatCatT22AY.390.000049
ORF1ab/nsp2281I281IatCatA12AY.39.10.00004
ORF1ab/nsp2281I281IatCatT12AY.39.10.00004
ORF1ab/nsp2281I281IatCatT22AY.470.000062
ORF1ab/nsp2281I281IatCatT22AY.9.20.000073
ORF1ab/nsp2281I281IatCatT22B0.000256
ORF1ab/nsp2281I281IatCatT22B.1.1.1980.002937
ORF1ab/nsp2281I281IatCatT22B.1.1.2540.022472
ORF1ab/nsp2281I281IatCatT22B.1.1.2980.001724
ORF1ab/nsp2281I281IatCatT22B.1.1.3850.008929
ORF1ab/nsp2281I281IatCatT22B.1.1.4160.00181
ORF1ab/nsp2281I281IatCatT22B.1.1.4190.014815
ORF1ab/nsp2281I281IatCatT22B.1.1.4300.083333
ORF1ab/nsp2281I281IatCatT22B.1.1.80.007168
ORF1ab/nsp2281I281IatCatT22B.1.1600.000062
ORF1ab/nsp2281I281IatCatT22B.1.177.810.000379
ORF1ab/nsp2281I281IatCatA12D.20.000075
ORF1ab/nsp2281I281IatCatT12D.20.000075
ORF1ab/nsp2281I281IatCatT11AU.20.002421
ORF1ab/nsp2281I281IatCatT11AY.1080.001103
ORF1ab/nsp2281I281IatCatT11AY.330.000067
ORF1ab/nsp2281I281IatCatT11AY.360.000148
ORF1ab/nsp2281I281IatCatT11AY.420.00004
ORF1ab/nsp2281I281IatCatT11AY.50.000021
ORF1ab/nsp2281I281IatCatT11AY.930.000273
ORF1ab/nsp2281I281IatCatT11AY.98.10.000048
ORF1ab/nsp2281I281IatCatA11AY.990.001049
ORF1ab/nsp2281I281IatCatT11B.1.1.1220.045455
ORF1ab/nsp2281I281IatCatT11B.1.1.1370.0125
ORF1ab/nsp2281I281IatCatT11B.1.1.1450.037037
ORF1ab/nsp2281I281IatCatT11B.1.1.1480.008772
ORF1ab/nsp2281I281IatCatT11B.1.1.1580.012195
ORF1ab/nsp2281I281IatCatT11B.1.1.2070.001182
ORF1ab/nsp2281I281IatCatT11B.1.1.2990.012195
ORF1ab/nsp2281I281IatCatT11B.1.1.3880.045455
ORF1ab/nsp2281I281IatCatT11B.1.1.3970.002252
ORF1ab/nsp2281I281IatCatT11B.1.1.3980.003226
ORF1ab/nsp2281I281IatCatT11B.1.1.4070.041667
ORF1ab/nsp2281I281IatCatT11B.1.1.4100.037037
ORF1ab/nsp2281I281IatCatT11B.1.1.4220.045455
ORF1ab/nsp2281I281IatCatT11B.1.1.4340.000349
ORF1ab/nsp2281I281IatCatT11B.1.1.440.00241
ORF1ab/nsp2281I281IatCatT11B.1.1.4620.008621
ORF1ab/nsp2281I281IatCatT11B.1.1.5230.001563
ORF1ab/nsp2281I281IatCatT11B.1.1.540.003021
ORF1ab/nsp2281I281IatCatT11B.1.1.890.006061
ORF1ab/nsp2281I281IatCatA11B.1.177.730.000566
ORF1ab/nsp2281I281IatCatT11B.1.1790.003759
ORF1ab/nsp2281I281IatCatT11B.1.2350.002519
ORF1ab/nsp2281I281IatCatT11B.1.3200.001245
ORF1ab/nsp2281I281IatCatT11B.1.3380.008621
ORF1ab/nsp2281I281IatCatT11B.1.3620.001541
ORF1ab/nsp2281I281IatCatT11B.1.3960.000706
ORF1ab/nsp2281I281IatCatT11B.1.466.20.000391
ORF1ab/nsp2281I281IatCatT11B.1.4760.1
ORF1ab/nsp2281I281IatCatT11B.1.4970.000315
ORF1ab/nsp2281I281IatCatT11B.1.5610.000397
ORF1ab/nsp2281I281IatCatA11B.1.5670.003333
ORF1ab/nsp2281I281IatCatT11B.1.5960.000087
ORF1ab/nsp2281I281IatCatT11B.1.6200.000946
ORF1ab/nsp2281I281IatCatT11B.1.6370.000073
ORF1ab/nsp2281I281IatCatT11C.160.00106
ORF1ab/nsp2281I281IatCatT11C.360.000911
ORF1ab/nsp2281I281IatCatT11C.50.090909
ORF1ab/nsp2281I281IatCatT11P.1.140.000048
ORF1ab/nsp2281I281IatCatT11P.1.150.000232