CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = I251T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2251I251TI431TnonsynaTaaCa1061020.9622641556-1558
ORF1ab/nsp2251I251TI431TnonsynaTAaCG10620.01886791556-1558
ORF1ab/nsp2251I251TI431TnonsynaTAaCC10610.009433961556-1558
ORF1ab/nsp2251I251TI431TnonsynaTAaCT10610.009433961556-1558

Details of the mutation I251T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2251I251TaTaaCa102106All0.00002
ORF1ab/nsp2251I251TaTAaCG2106All0
ORF1ab/nsp2251I251TaTAaCT1106All0
ORF1ab/nsp2251I251TaTAaCC1106All0
ORF1ab/nsp2251I251TaTaaCa3738B.1.1.70.000033
ORF1ab/nsp2251I251TaTAaCG138B.1.1.70.000001
ORF1ab/nsp2251I251TaTaaCa1818AY.1030.000112
ORF1ab/nsp2251I251TaTaaCa78P.10.00011
ORF1ab/nsp2251I251TaTAaCG18P.10.000016
ORF1ab/nsp2251I251TaTaaCa66B.1.617.20.000023
ORF1ab/nsp2251I251TaTaaCa340.166667
ORF1ab/nsp2251I251TaTAaCT140.055556
ORF1ab/nsp2251I251TaTaaCa44B.1.1.3110.001433
ORF1ab/nsp2251I251TaTaaCa33B.1.4290.000071
ORF1ab/nsp2251I251TaTaaCa22AY.250.000012
ORF1ab/nsp2251I251TaTaaCa22AY.30.00002
ORF1ab/nsp2251I251TaTaaCa22AY.40.000003
ORF1ab/nsp2251I251TaTaaCa22B.1.20.000018
ORF1ab/nsp2251I251TaTAaCC12P.20.000187
ORF1ab/nsp2251I251TaTaaCa12P.20.000187
ORF1ab/nsp2251I251TaTaaCa11A.90.045455
ORF1ab/nsp2251I251TaTaaCa11AY.20.000356
ORF1ab/nsp2251I251TaTaaCa11AY.200.000039
ORF1ab/nsp2251I251TaTaaCa11AY.260.000028
ORF1ab/nsp2251I251TaTaaCa11AY.290.000016
ORF1ab/nsp2251I251TaTaaCa11AY.4.20.000022
ORF1ab/nsp2251I251TaTaaCa11AY.4.50.000107
ORF1ab/nsp2251I251TaTaaCa11AY.420.00004
ORF1ab/nsp2251I251TaTaaCa11AY.60.000041
ORF1ab/nsp2251I251TaTaaCa11AY.99.20.000092
ORF1ab/nsp2251I251TaTaaCa11B0.000128
ORF1ab/nsp2251I251TaTaaCa11B.10.000009
ORF1ab/nsp2251I251TaTaaCa11B.1.10.000018
ORF1ab/nsp2251I251TaTaaCa11B.1.1600.000031
ORF1ab/nsp2251I251TaTaaCa11B.1.3770.004566