CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 208 | H208Y | H388Y | nonsyn | Cat | Tat | 8310 | 8305 | 0.999398 | 1427-1429 |
ORF1ab/nsp2 | 208 | H208Y | H388Y | nonsyn | CaT | TaC | 8310 | 5 | 0.000601685 | 1427-1429 |
Details of the mutation H208Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 8305 | 8310 | All | 0.001588 |
ORF1ab/nsp2 | 208 | H208Y | CaT | TaC | 5 | 8310 | All | 0.000001 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3645 | 3645 | P.1.10 | 0.982215 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 511 | 511 | B.1.1.7 | 0.000457 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 452 | 452 | B.1.565 | 0.366288 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 288 | 288 | AY.4 | 0.000448 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 240 | 240 | B.1.617.2 | 0.000904 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 234 | 234 | AY.43 | 0.001037 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 176 | 176 | B.1.2 | 0.00155 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 173 | 174 | AY.103 | 0.001074 |
ORF1ab/nsp2 | 208 | H208Y | CaT | TaC | 1 | 174 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 147 | 147 | B.1.177 | 0.001936 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 141 | 141 | AY.25 | 0.000848 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 115 | 115 | AY.20 | 0.004469 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 102 | 102 | AY.3 | 0.001015 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 97 | 97 | R.1 | 0.008731 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 93 | 93 | B.1.427 | 0.004696 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 91 | 91 | B.1.1.222 | 0.018564 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 90 | 90 | P.1 | 0.001418 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 89 | 89 | B.1.1.254 | 1 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 85 | 85 | B.1 | 0.000779 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 82 | 82 | P.1.10.1 | 0.666667 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 61 | 61 | B.1.1.329 | 0.234615 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 57 | 57 | AY.44 | 0.000347 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 51 | 51 | B.1.369 | 0.014546 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 51 | 51 | Q.1 | 0.006443 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 49 | 49 | AY.14 | 0.004313 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 43 | 43 | B.1.429 | 0.001012 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 37 | 37 | B.1.526 | 0.00087 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 34 | 34 | AY.7 | 0.006664 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 34 | 34 | B.1.1.507 | 0.295652 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 33 | 33 | AY.54 | 0.003146 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 33 | 33 | B.1.160 | 0.001029 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 30 | 30 | AY.102 | 0.000795 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 30 | 30 | B.1.428.2 | 1 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 28 | 28 | AY.118 | 0.001754 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 28 | 28 | AY.26 | 0.000793 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 24 | 24 | AY.39 | 0.000593 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 24 | 24 | P.1.10.2 | 1 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 22 | 22 | B.1.1.70 | 0.007503 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 21 | 21 | AY.99.2 | 0.001935 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 21 | 21 | B.1.221 | 0.001492 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 19 | 19 | B.1.243 | 0.001322 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 18 | 18 | B.1.391 | 0.020293 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 16 | 16 | B.1.36 | 0.002334 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 15 | 15 | B.1.1.274 | 0.075758 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 15 | 15 | B.1.1.519 | 0.000596 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 15 | 15 | B.1.177.21 | 0.001147 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 15 | 15 | B.1.637 | 0.001096 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 14 | 14 | AY.119 | 0.000494 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 14 | 14 | AY.16 | 0.005315 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 14 | 14 | B.1.561 | 0.005558 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 13 | 13 | P.1.14 | 0.000621 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 12 | 12 | AY.4.2 | 0.00026 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 11 | 11 | AY.120 | 0.000409 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 11 | 11 | AY.121 | 0.001488 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 11 | 11 | AY.29 | 0.000174 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 11 | 11 | B.1.1.284 | 0.001181 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 11 | 11 | B.1.351 | 0.000327 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 11 | 11 | B.1.351.2 | 0.003328 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 11 | 11 | B.1.525 | 0.001245 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 9 | 9 | AY.105 | 0.005788 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 9 | 9 | AY.5 | 0.000186 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 9 | 9 | B.1.1 | 0.000163 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 9 | 9 | B.1.621 | 0.000797 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 8 | 8 | AY.33 | 0.000534 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 8 | 8 | AY.45 | 0.000973 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 8 | 8 | B.1.110 | 0.036199 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 8 | 8 | B.1.258 | 0.000532 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 8 | 8 | B.1.609 | 0.003835 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 7 | 7 | AY.12 | 0.002212 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 7 | 7 | AY.4.5 | 0.000752 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 7 | 7 | AY.75 | 0.000392 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 7 | 7 | AY.77 | 0.007892 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 7 | 7 | AY.98.1 | 0.000339 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 7 | 7 | B.1.575 | 0.002124 |
ORF1ab/nsp2 | 208 | H208Y | CaT | TaC | 4 | 6 | 0.222222 | |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 6 | 0.111111 | |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 6 | 6 | AY.27 | 0.000388 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 6 | 6 | AY.61 | 0.000629 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 6 | 6 | B.1.1.207 | 0.007092 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 6 | 6 | B.1.177.35 | 0.004147 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 6 | 6 | B.1.378 | 0.041096 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 6 | 6 | B.1.438.1 | 0.000644 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 6 | 6 | B.1.466.2 | 0.002347 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | A.1 | 0.001409 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | A.2.5.2 | 0.007862 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | AY.36 | 0.000741 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | AY.42 | 0.000201 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | AY.47 | 0.000156 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | AY.79 | 0.006053 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | B.1.1.294 | 0.006329 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | B.1.1.317 | 0.002058 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | B.1.320 | 0.006227 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | B.6.6 | 0.004444 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 5 | 5 | P.1.16 | 0.001871 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 4 | 4 | AY.106 | 0.00134 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 4 | 4 | AY.13 | 0.000644 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 4 | 4 | B.1.1.37 | 0.000771 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 4 | 4 | B.1.234 | 0.000528 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 4 | 4 | B.1.389 | 0.004008 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 4 | 4 | B.1.396 | 0.002823 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 4 | 4 | B.1.411 | 0.014815 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | A | 0.001161 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | A.2.5 | 0.001497 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | AU.1 | 0.003797 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | AY.16.1 | 0.00141 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | AY.55 | 0.002752 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B | 0.000383 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.1.219 | 0.015 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.139 | 0.002199 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.160.30 | 0.008929 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.177.86 | 0.00055 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.188 | 0.05 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.210 | 0.006397 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.240 | 0.000647 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.399 | 0.005803 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.470 | 0.004213 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | B.1.620 | 0.002838 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.104 | 0.003968 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.120.1 | 0.000642 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | AY.90 | 0.001369 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.1.263 | 0.003115 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.1.279 | 0.002242 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.1.528 | 0.009615 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.177.46 | 0.001837 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.177.52 | 0.003515 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.177.57 | 0.000562 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.177.77 | 0.001452 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.177.83 | 0.002963 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.199 | 0.008264 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.349 | 0.00143 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.36.8 | 0.002 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.433 | 0.00639 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | B.1.618 | 0.008065 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | C.26 | 0.014706 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | P.1.13 | 0.001797 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 2 | 2 | P.6 | 0.006289 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.22 | 0.002092 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.171 | 0.003676 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.303 | 0.002762 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.378 | 0.007299 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.389 | 0.006061 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.458 | 0.041667 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.47 | 0.005348 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.160.12 | 0.00641 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.177.40 | 0.005155 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.240.1 | 0.025 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.380 | 0.006623 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.425 | 0.002994 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.429.1 | 0.012048 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.546 | 0.003704 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.603 | 0.010638 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.1.88.1 | 0.004808 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | C.36.3.1 | 0.002717 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp2 | 208 | H208Y | Cat | Tat | 1 | 1 | Q.3 | 0.000145 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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