CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 194 | H194Y | H374Y | nonsyn | Cac | Tac | 7441 | 7429 | 0.998387 | 1385-1387 |
ORF1ab/nsp2 | 194 | H194Y | H374Y | nonsyn | CaC | TaT | 7441 | 12 | 0.00161269 | 1385-1387 |
Details of the mutation H194Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 7429 | 7441 | All | 0.001421 |
ORF1ab/nsp2 | 194 | H194Y | CaC | TaT | 12 | 7441 | All | 0.000002 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1664 | 1670 | AY.4 | 0.00259 |
ORF1ab/nsp2 | 194 | H194Y | CaC | TaT | 6 | 1670 | AY.4 | 0.000009 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1351 | 1351 | B.1.1.7 | 0.001209 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1111 | 1111 | B.1.509 | 0.961905 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 228 | 228 | AY.20 | 0.008861 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 218 | 218 | B.1.177.51 | 0.995434 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 196 | 197 | B.1.617.2 | 0.000738 |
ORF1ab/nsp2 | 194 | H194Y | CaC | TaT | 1 | 197 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 195 | 195 | B.1 | 0.001786 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 150 | 154 | B.1.2 | 0.001321 |
ORF1ab/nsp2 | 194 | H194Y | CaC | TaT | 4 | 154 | B.1.2 | 0.000035 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 105 | 105 | AY.103 | 0.000652 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 97 | 97 | AY.44 | 0.00059 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 92 | 92 | AY.29 | 0.001451 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 74 | 75 | P.1 | 0.001166 |
ORF1ab/nsp2 | 194 | H194Y | CaC | TaT | 1 | 75 | P.1 | 0.000016 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 71 | 71 | W.4 | 0.095946 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 63 | 63 | AY.25 | 0.000379 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 63 | 63 | B.1.569 | 0.913043 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 61 | 61 | B.1.177 | 0.000803 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 58 | 58 | AY.35 | 0.013517 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 58 | 58 | AY.99.2 | 0.005345 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 52 | 52 | AY.43 | 0.00023 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 52 | 52 | B.1.1 | 0.000943 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 47 | 47 | AY.46.2 | 0.02986 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 47 | 47 | B.1.427 | 0.002373 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 45 | 45 | A.2.5 | 0.022455 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 44 | 44 | AY.34 | 0.004266 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 43 | 43 | B.1.526 | 0.001011 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 42 | 42 | B.1.637 | 0.003069 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 39 | 39 | AY.3 | 0.000388 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 36 | 36 | Q.1 | 0.004548 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 35 | 35 | AY.98.1 | 0.001695 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 31 | 31 | AY.4.2 | 0.000672 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 29 | 29 | B.1.234 | 0.003826 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 28 | 28 | B.1.1.37 | 0.0054 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 27 | 27 | AY.6 | 0.00111 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 27 | 27 | AY.82 | 0.036635 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 25 | 25 | B.1.177.20 | 0.037936 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 23 | 23 | B.1.258.17 | 0.002391 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 22 | 22 | AY.69 | 0.004107 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 22 | 22 | AY.9.1 | 0.001842 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 22 | 22 | B.1.36 | 0.00321 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 21 | 21 | B.1.221 | 0.001492 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 20 | 20 | B.1.351 | 0.000595 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 19 | 19 | AY.75 | 0.001064 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 19 | 19 | B.1.621 | 0.001682 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 18 | 18 | AY.47 | 0.00056 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 18 | 18 | B.1.351.2 | 0.005446 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 17 | 17 | B.1.160 | 0.00053 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 16 | 16 | AY.54 | 0.001526 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 16 | 16 | B.1.619 | 0.013937 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 15 | 15 | B.1.429 | 0.000353 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 14 | 14 | AY.102 | 0.000371 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 14 | 14 | AY.42 | 0.000563 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 14 | 14 | B.1.1.519 | 0.000556 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 14 | 14 | B.1.596 | 0.00122 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 14 | 14 | C.37 | 0.001625 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 12 | 12 | B.1.1.70 | 0.004093 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 12 | 12 | B.1.177.77 | 0.008715 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 11 | 11 | AY.39 | 0.000272 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 11 | 11 | AY.98 | 0.000869 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 10 | 10 | AY.5 | 0.000206 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 10 | 10 | AY.9.2 | 0.000367 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 10 | 10 | B.1.1.222 | 0.00204 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 10 | 10 | B.1.574 | 0.021505 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 10 | 10 | C.16 | 0.010604 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 10 | 10 | P.1.14 | 0.000478 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 9 | 9 | AM.2 | 1 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 9 | 9 | AY.100 | 0.000414 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 9 | 9 | B.1.177.7 | 0.001484 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 9 | 9 | B.1.243 | 0.000626 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 8 | 8 | AY.1 | 0.003166 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 8 | 8 | AY.45 | 0.000973 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 8 | 8 | B.1.1.186 | 0.027491 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 8 | 8 | B.1.1.356 | 0.068376 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 8 | 8 | B.1.311 | 0.002197 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 8 | 8 | P.2 | 0.001493 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 7 | 7 | AY.26 | 0.000198 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 7 | 7 | AY.61 | 0.000733 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 7 | 7 | AY.85 | 0.00299 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 6 | 6 | AY.107 | 0.002796 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 6 | 6 | AY.121 | 0.000812 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 6 | 6 | AY.14 | 0.000528 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 6 | 6 | AY.23.1 | 0.002504 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 6 | 6 | B.1.1.25 | 0.003411 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 6 | 6 | B.1.552 | 0.090909 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 6 | 6 | B.1.580 | 0.02439 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 6 | 6 | B.1.596.1 | 0.056075 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 6 | 6 | B.1.599 | 0.021898 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | AY.16.1 | 0.00235 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | AY.3.1 | 0.000426 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | AY.33 | 0.000334 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | AY.46 | 0.00052 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | AY.72 | 0.006803 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | AY.9 | 0.000338 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | B.1.1.214 | 0.000277 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | B.1.1.294 | 0.006329 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | B.1.258 | 0.000333 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 5 | 5 | Q.7 | 0.005556 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | AY.113 | 0.00057 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | AY.5.3 | 0.00135 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | B | 0.000511 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | B.1.1.255 | 0.012121 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | B.1.1.432 | 0.005063 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | B.1.575 | 0.001214 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | B.1.628 | 0.001409 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | M.3 | 0.307692 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | A.1 | 0.000846 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | AY.101 | 0.001471 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | AY.46.6 | 0.000217 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | AY.48 | 0.001395 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | AY.55 | 0.002752 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.1.284 | 0.000322 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.177.44 | 0.001557 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.177.57 | 0.000843 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.36.29 | 0.001552 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.398 | 0.008929 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.400 | 0.001287 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.438.1 | 0.000322 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.462 | 0.021739 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 3 | 3 | P.1.16 | 0.001122 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.64 | 0.00119 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.7.1 | 0.000225 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | AY.96 | 0.004149 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.1.111 | 0.029412 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.160.26 | 0.004843 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.177.35 | 0.001382 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.199 | 0.008264 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.36.31 | 0.003503 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.367 | 0.001585 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.389 | 0.002004 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.525 | 0.000226 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | B.6.6 | 0.001778 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 2 | 2 | P.1.10 | 0.000539 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | A.21 | 0.00277 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AT.1 | 0.005128 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.4.1 | 0.000737 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.83 | 0.001724 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | AZ.4 | 0.003356 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.109 | 0.04 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.12 | 0.007463 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.221 | 0.010101 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.225 | 0.007194 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.344 | 0.010753 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.367 | 0.055556 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.368 | 0.003086 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.413 | 0.006897 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.442 | 0.018519 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.453 | 0.008475 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.521 | 0.005348 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.1.8 | 0.003584 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.108 | 0.005814 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.160.32 | 0.004292 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.169 | 0.014925 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.214.4 | 0.009091 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.395 | 0.007042 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.402 | 0.009804 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.540 | 0.009709 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.1.9.4 | 0.006135 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.5 | 0.038462 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.6.1 | 0.026316 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | B.6.3 | 0.026316 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | N.3 | 0.005814 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | P.4 | 0.003802 |
ORF1ab/nsp2 | 194 | H194Y | Cac | Tac | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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