CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = G339G

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2339G339GG519GsynggTggC2291730.7554591820-1822
ORF1ab/nsp2339G339GG519GsynggTggA229430.1877731820-1822
ORF1ab/nsp2339G339GG519GsynggTggG229130.05676861820-1822

Details of the mutation G339G within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2339G339GggTggC173229All0.000033
ORF1ab/nsp2339G339GggTggA43229All0.000008
ORF1ab/nsp2339G339GggTggG13229All0.000002
ORF1ab/nsp2339G339GggTggC106111B.1.1.70.000095
ORF1ab/nsp2339G339GggTggG3111B.1.1.70.000003
ORF1ab/nsp2339G339GggTggA2111B.1.1.70.000002
ORF1ab/nsp2339G339GggTggA3434B.1.617.10.004385
ORF1ab/nsp2339G339GggTggC1515B.1.1.4320.018987
ORF1ab/nsp2339G339GggTggC1010AY.470.000311
ORF1ab/nsp2339G339GggTggC99AY.4.50.000967
ORF1ab/nsp2339G339GggTggC57AY.40.000008
ORF1ab/nsp2339G339GggTggG17AY.40.000002
ORF1ab/nsp2339G339GggTggA17AY.40.000002
ORF1ab/nsp2339G339GggTggA44B.1.5260.000094
ORF1ab/nsp2339G339GggTggG24B.1.617.20.000008
ORF1ab/nsp2339G339GggTggC24B.1.617.20.000008
ORF1ab/nsp2339G339GggTggC33AY.7.10.000338
ORF1ab/nsp2339G339GggTggC23B.10.000018
ORF1ab/nsp2339G339GggTggG13B.10.000009
ORF1ab/nsp2339G339GggTggC23B.1.20.000018
ORF1ab/nsp2339G339GggTggG13B.1.20.000009
ORF1ab/nsp2339G339GggTggC23B.1.4290.000047
ORF1ab/nsp2339G339GggTggA13B.1.4290.000024
ORF1ab/nsp2339G339GggTggC12AY.440.000006
ORF1ab/nsp2339G339GggTggG12AY.440.000006
ORF1ab/nsp2339G339GggTggC22B.1.1770.000026
ORF1ab/nsp2339G339GggTggG12P.1.10.000318
ORF1ab/nsp2339G339GggTggC12P.1.10.000318
ORF1ab/nsp2339G339GggTggC11AY.250.000006
ORF1ab/nsp2339G339GggTggC11AY.290.000016
ORF1ab/nsp2339G339GggTggA11AY.30.00001
ORF1ab/nsp2339G339GggTggC11AY.380.000499
ORF1ab/nsp2339G339GggTggG11AY.460.000104
ORF1ab/nsp2339G339GggTggC11AY.750.000056
ORF1ab/nsp2339G339GggTggC11B.1.10.000018
ORF1ab/nsp2339G339GggTggC11B.1.1.1700.001247
ORF1ab/nsp2339G339GggTggC11B.1.1.1980.001468
ORF1ab/nsp2339G339GggTggC11B.1.1.2650.003155
ORF1ab/nsp2339G339GggTggG11B.1.177.150.000631
ORF1ab/nsp2339G339GggTggC11B.1.3510.00003
ORF1ab/nsp2339G339GggTggC11B.1.36.80.001
ORF1ab/nsp2339G339GggTggC11B.1.3670.000792
ORF1ab/nsp2339G339GggTggC11B.1.6340.003425
ORF1ab/nsp2339G339GggTggG11Q.10.000126
ORF1ab/nsp2339G339GggTggC11R.10.00009