CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = G339C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2339G339CG519CnonsynGgtTgt36336311820-1822

Details of the mutation G339C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2339G339CGgtTgt363363All0.000069
ORF1ab/nsp2339G339CGgtTgt7676AY.430.000337
ORF1ab/nsp2339G339CGgtTgt4646B.10.000421
ORF1ab/nsp2339G339CGgtTgt4545B.1.1.70.00004
ORF1ab/nsp2339G339CGgtTgt4444B.1.1.390.022426
ORF1ab/nsp2339G339CGgtTgt3232B.1.1770.000421
ORF1ab/nsp2339G339CGgtTgt1313B.1.20.000114
ORF1ab/nsp2339G339CGgtTgt1212AY.40.000019
ORF1ab/nsp2339G339CGgtTgt99AY.4.50.000967
ORF1ab/nsp2339G339CGgtTgt88AY.70.001568
ORF1ab/nsp2339G339CGgtTgt88B.1.617.20.00003
ORF1ab/nsp2339G339CGgtTgt77B.1.1.2210.070707
ORF1ab/nsp2339G339CGgtTgt66AY.440.000037
ORF1ab/nsp2339G339CGgtTgt55AY.1030.000031
ORF1ab/nsp2339G339CGgtTgt44B.1.1.3820.142857
ORF1ab/nsp2339G339CGgtTgt33AY.1190.000106
ORF1ab/nsp2339G339CGgtTgt33AY.4.20.000065
ORF1ab/nsp2339G339CGgtTgt33AY.50.000062
ORF1ab/nsp2339G339CGgtTgt22A.23.10.001408
ORF1ab/nsp2339G339CGgtTgt22AY.1000.000092
ORF1ab/nsp2339G339CGgtTgt22AY.1210.000271
ORF1ab/nsp2339G339CGgtTgt22B.1.10.000036
ORF1ab/nsp2339G339CGgtTgt22B.1.2230.005556
ORF1ab/nsp2339G339CGgtTgt22B.1.4290.000047
ORF1ab/nsp2339G339CGgtTgt22B.1.5260.000047
ORF1ab/nsp2339G339CGgtTgt11AY.130.000161
ORF1ab/nsp2339G339CGgtTgt11AY.200.000039
ORF1ab/nsp2339G339CGgtTgt11AY.250.000006
ORF1ab/nsp2339G339CGgtTgt11AY.30.00001
ORF1ab/nsp2339G339CGgtTgt11AY.330.000067
ORF1ab/nsp2339G339CGgtTgt11AY.340.000097
ORF1ab/nsp2339G339CGgtTgt11AY.390.000025
ORF1ab/nsp2339G339CGgtTgt11AY.400.000964
ORF1ab/nsp2339G339CGgtTgt11AY.950.000761
ORF1ab/nsp2339G339CGgtTgt11AY.98.10.000048
ORF1ab/nsp2339G339CGgtTgt11B0.000128
ORF1ab/nsp2339G339CGgtTgt11B.1.1.100.001115
ORF1ab/nsp2339G339CGgtTgt11B.1.1.2220.000204
ORF1ab/nsp2339G339CGgtTgt11B.1.1.3050.003861
ORF1ab/nsp2339G339CGgtTgt11B.1.1.3060.000438
ORF1ab/nsp2339G339CGgtTgt11B.1.1.3690.000446
ORF1ab/nsp2339G339CGgtTgt11B.1.110.30.000718
ORF1ab/nsp2339G339CGgtTgt11B.1.1600.000031
ORF1ab/nsp2339G339CGgtTgt11B.1.177.810.000189
ORF1ab/nsp2339G339CGgtTgt11B.1.3490.000715
ORF1ab/nsp2339G339CGgtTgt11B.1.36.290.000517
ORF1ab/nsp2339G339CGgtTgt11B.1.4730.019231
ORF1ab/nsp2339G339CGgtTgt11B.1.5090.000866
ORF1ab/nsp2339G339CGgtTgt11B.1.5960.000087
ORF1ab/nsp2339G339CGgtTgt11B.1.6210.000089