CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = G285D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2285G285DG465DnonsyngGtgAt1351340.9925931658-1660
ORF1ab/nsp2285G285DG465DnonsyngGTgAC13510.007407411658-1660

Details of the mutation G285D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2285G285DgGtgAt134135All0.000026
ORF1ab/nsp2285G285DgGTgAC1135All0
ORF1ab/nsp2285G285DgGtgAt2828AY.40.000044
ORF1ab/nsp2285G285DgGtgAt2424B.1.1.70.000021
ORF1ab/nsp2285G285DgGtgAt2222AY.30.000219
ORF1ab/nsp2285G285DgGtgAt1313AY.1030.000081
ORF1ab/nsp2285G285DgGtgAt77P.10.00011
ORF1ab/nsp2285G285DgGtgAt55B.1.9.20.5
ORF1ab/nsp2285G285DgGtgAt44AY.20.001425
ORF1ab/nsp2285G285DgGtgAt33AY.440.000018
ORF1ab/nsp2285G285DgGtgAt33AY.7.20.001678
ORF1ab/nsp2285G285DgGtgAt33AY.950.002283
ORF1ab/nsp2285G285DgGtgAt23B.1.617.20.000008
ORF1ab/nsp2285G285DgGTgAC13B.1.617.20.000004
ORF1ab/nsp2285G285DgGtgAt22AY.390.000049
ORF1ab/nsp2285G285DgGtgAt11AY.1180.000063
ORF1ab/nsp2285G285DgGtgAt11AY.1190.000035
ORF1ab/nsp2285G285DgGtgAt11AY.1210.000135
ORF1ab/nsp2285G285DgGtgAt11AY.250.000006
ORF1ab/nsp2285G285DgGtgAt11AY.290.000016
ORF1ab/nsp2285G285DgGtgAt11AY.3.10.000085
ORF1ab/nsp2285G285DgGtgAt11AY.330.000067
ORF1ab/nsp2285G285DgGtgAt11AY.420.00004
ORF1ab/nsp2285G285DgGtgAt11AY.430.000004
ORF1ab/nsp2285G285DgGtgAt11AY.450.000122
ORF1ab/nsp2285G285DgGtgAt11AY.680.000274
ORF1ab/nsp2285G285DgGtgAt11AY.99.20.000092
ORF1ab/nsp2285G285DgGtgAt11B.10.000009
ORF1ab/nsp2285G285DgGtgAt11B.1.10.000018
ORF1ab/nsp2285G285DgGtgAt11B.1.1.3480.000796
ORF1ab/nsp2285G285DgGtgAt11B.1.1.5190.00004
ORF1ab/nsp2285G285DgGtgAt11B.1.20.000009
ORF1ab/nsp2285G285DgGtgAt11B.1.5950.000261

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.