CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = F529del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2529F529delF709deldelTTT---747412390-2392

Details of the mutation F529del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2529F529delTTT---7474All0.000014
ORF1ab/nsp2529F529delTTT---1616B.1.1.70.000014
ORF1ab/nsp2529F529delTTT---660.333333
ORF1ab/nsp2529F529delTTT---66B.10.000055
ORF1ab/nsp2529F529delTTT---33B.1.1.330.001263
ORF1ab/nsp2529F529delTTT---33B.1.617.20.000011
ORF1ab/nsp2529F529delTTT---22AY.430.000009
ORF1ab/nsp2529F529delTTT---22AY.990.002099
ORF1ab/nsp2529F529delTTT---22B.1.10.000036
ORF1ab/nsp2529F529delTTT---22B.1.1.3480.001592
ORF1ab/nsp2529F529delTTT---22B.1.4240.016129
ORF1ab/nsp2529F529delTTT---22B.1.4290.000047
ORF1ab/nsp2529F529delTTT---22B.1.617.10.000258
ORF1ab/nsp2529F529delTTT---22N.60.014184
ORF1ab/nsp2529F529delTTT---11AY.1080.001103
ORF1ab/nsp2529F529delTTT---11AY.1130.000142
ORF1ab/nsp2529F529delTTT---11AY.1170.000085
ORF1ab/nsp2529F529delTTT---11AY.260.000028
ORF1ab/nsp2529F529delTTT---11AY.29.10.000221
ORF1ab/nsp2529F529delTTT---11AY.40.000002
ORF1ab/nsp2529F529delTTT---11AY.440.000006
ORF1ab/nsp2529F529delTTT---11AY.46.60.000072
ORF1ab/nsp2529F529delTTT---11AY.620.000436
ORF1ab/nsp2529F529delTTT---11AY.750.000056
ORF1ab/nsp2529F529delTTT---11AY.840.000437
ORF1ab/nsp2529F529delTTT---11AY.98.10.000048
ORF1ab/nsp2529F529delTTT---11B.1.1.1130.006993
ORF1ab/nsp2529F529delTTT---11B.1.1.1390.022727
ORF1ab/nsp2529F529delTTT---11B.1.1.4160.000905
ORF1ab/nsp2529F529delTTT---11B.1.1.4480.002033
ORF1ab/nsp2529F529delTTT---11B.1.1790.003759
ORF1ab/nsp2529F529delTTT---11B.1.2580.000067
ORF1ab/nsp2529F529delTTT---11B.1.416.10.001563
ORF1ab/nsp2529F529delTTT---11B.1.5610.000397
ORF1ab/nsp2529F529delTTT---11B.1.6210.000089
ORF1ab/nsp2529F529delTTT---11B.570.015152
ORF1ab/nsp2529F529delTTT---11P.10.000016
ORF1ab/nsp2529F529delTTT---11P.20.000187