CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = F529S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2529F529SF709SnonsyntTttCt17140.8235292390-2392
ORF1ab/nsp2529F529SF709SnonsynTTtAGt1710.05882352390-2392
ORF1ab/nsp2529F529SF709SnonsyntTTtCG1710.05882352390-2392
ORF1ab/nsp2529F529SF709SnonsyntTTtCC1710.05882352390-2392

Details of the mutation F529S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2529F529StTttCt1417All0.000003
ORF1ab/nsp2529F529STTtAGt117All0
ORF1ab/nsp2529F529StTTtCG117All0
ORF1ab/nsp2529F529StTTtCC117All0
ORF1ab/nsp2529F529StTttCt23B.1.1.70.000002
ORF1ab/nsp2529F529STTtAGt13B.1.1.70.000001
ORF1ab/nsp2529F529StTttCt22AY.250.000012
ORF1ab/nsp2529F529StTttCt22B.1.10.000036
ORF1ab/nsp2529F529StTttCt11AY.520.000814
ORF1ab/nsp2529F529StTTtCC11B.1.1.2790.001121
ORF1ab/nsp2529F529StTttCt11B.1.1600.000031
ORF1ab/nsp2529F529StTttCt11B.1.160.140.002119
ORF1ab/nsp2529F529StTttCt11B.1.160.260.002421
ORF1ab/nsp2529F529StTTtCG11B.1.20.000009
ORF1ab/nsp2529F529StTttCt11B.1.214.20.0006
ORF1ab/nsp2529F529StTttCt11B.1.5960.000087
ORF1ab/nsp2529F529StTttCt11B.1.617.20.000004
ORF1ab/nsp2529F529StTttCt11D.20.000075