CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = F505Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2505F505YF685YnonsyntTttAt14110.7857142318-2320
ORF1ab/nsp2505F505YF685YnonsyntTTtAC1430.2142862318-2320

Details of the mutation F505Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2505F505YtTttAt1114All0.000002
ORF1ab/nsp2505F505YtTTtAC314All0.000001
ORF1ab/nsp2505F505YtTttAt23B.1.1.70.000002
ORF1ab/nsp2505F505YtTTtAC13B.1.1.70.000001
ORF1ab/nsp2505F505YtTTtAC12AY.1130.000142
ORF1ab/nsp2505F505YtTttAt12AY.1130.000142
ORF1ab/nsp2505F505YtTttAt22B.1.20.000018
ORF1ab/nsp2505F505YtTttAt11AY.1200.000037
ORF1ab/nsp2505F505YtTttAt11AY.40.000002
ORF1ab/nsp2505F505YtTTtAC11AY.46.60.000072
ORF1ab/nsp2505F505YtTttAt11AY.580.000907
ORF1ab/nsp2505F505YtTttAt11B.1.1600.000031
ORF1ab/nsp2505F505YtTttAt11B.1.160.140.002119
ORF1ab/nsp2505F505YtTttAt11B.1.2340.000132