CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = F499Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2499F499YF679YnonsyntTttAt980.8888892300-2302
ORF1ab/nsp2499F499YF679YnonsyntTTtAC910.1111112300-2302

Details of the mutation F499Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2499F499YtTttAt89All0.000002
ORF1ab/nsp2499F499YtTTtAC19All0
ORF1ab/nsp2499F499YtTttAt55AY.40.000008
ORF1ab/nsp2499F499YtTttAt22B.1.20.000018
ORF1ab/nsp2499F499YtTTtAC11AY.440.000006
ORF1ab/nsp2499F499YtTttAt11P.10.000016