CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = F499T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2499F499TF679TnonsynTTTACC320.6666672300-2302
ORF1ab/nsp2499F499TF679TnonsynTTTACG310.3333332300-2302

Details of the mutation F499T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2499F499TTTTACC23All0
ORF1ab/nsp2499F499TTTTACG13All0
ORF1ab/nsp2499F499TTTTACG11B.10.000009
ORF1ab/nsp2499F499TTTTACC11B.1.1.70.000001
ORF1ab/nsp2499F499TTTTACC11B.1.617.20.000004