CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = F437L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2437F437LF617LnonsynttTttA9277970.8597632114-2116
ORF1ab/nsp2437F437LF617LnonsynTttCtt9271150.1240562114-2116
ORF1ab/nsp2437F437LF617LnonsynttTttG927150.01618122114-2116

Details of the mutation F437L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2437F437LttTttA797927All0.000152
ORF1ab/nsp2437F437LTttCtt115927All0.000022
ORF1ab/nsp2437F437LttTttG15927All0.000003
ORF1ab/nsp2437F437LttTttA486486AY.730.323353
ORF1ab/nsp2437F437LttTttA7878AY.1020.002068
ORF1ab/nsp2437F437LttTttA6464AY.900.043806
ORF1ab/nsp2437F437LTttCtt2644B.1.1.70.000023
ORF1ab/nsp2437F437LttTttA1544B.1.1.70.000013
ORF1ab/nsp2437F437LttTttG344B.1.1.70.000003
ORF1ab/nsp2437F437LttTttA3844B.1.617.20.000143
ORF1ab/nsp2437F437LTttCtt444B.1.617.20.000015
ORF1ab/nsp2437F437LttTttG244B.1.617.20.000008
ORF1ab/nsp2437F437LttTttA1121AY.440.000067
ORF1ab/nsp2437F437LTttCtt1021AY.440.000061
ORF1ab/nsp2437F437LttTttA2121B.511
ORF1ab/nsp2437F437LttTttA1317AY.1030.000081
ORF1ab/nsp2437F437LTttCtt317AY.1030.000019
ORF1ab/nsp2437F437LttTttG117AY.1030.000006
ORF1ab/nsp2437F437LTttCtt612AY.430.000027
ORF1ab/nsp2437F437LttTttA612AY.430.000027
ORF1ab/nsp2437F437LTttCtt810AY.1200.000297
ORF1ab/nsp2437F437LttTttA210AY.1200.000074
ORF1ab/nsp2437F437LTttCtt910B.10.000082
ORF1ab/nsp2437F437LttTttG110B.10.000009
ORF1ab/nsp2437F437LttTttA88AY.46.40.001316
ORF1ab/nsp2437F437LTttCtt46AY.30.00004
ORF1ab/nsp2437F437LttTttA26AY.30.00002
ORF1ab/nsp2437F437LTttCtt46AY.40.000006
ORF1ab/nsp2437F437LttTttA16AY.40.000002
ORF1ab/nsp2437F437LttTttG16AY.40.000002
ORF1ab/nsp2437F437LttTttA56AY.460.00052
ORF1ab/nsp2437F437LTttCtt16AY.460.000104
ORF1ab/nsp2437F437LttTttG35B.1.10.000054
ORF1ab/nsp2437F437LttTttA25B.1.10.000036
ORF1ab/nsp2437F437LttTttA55P.10.000079
ORF1ab/nsp2437F437LttTttA44AY.390.000099
ORF1ab/nsp2437F437LttTttA44B.1.1.2410.008282
ORF1ab/nsp2437F437LTttCtt33AY.1130.000427
ORF1ab/nsp2437F437LttTttA33AY.420.000121
ORF1ab/nsp2437F437LttTttA33AY.50.000062
ORF1ab/nsp2437F437LTttCtt33B.1.1.1530.003286
ORF1ab/nsp2437F437LTttCtt33B.1.1.260.015707
ORF1ab/nsp2437F437LTttCtt33B.1.2580.0002
ORF1ab/nsp2437F437LTttCtt23B.1.5260.000047
ORF1ab/nsp2437F437LttTttA13B.1.5260.000024
ORF1ab/nsp2437F437LTttCtt220.111111
ORF1ab/nsp2437F437LttTttA22AY.1170.000169
ORF1ab/nsp2437F437LttTttA12AY.250.000006
ORF1ab/nsp2437F437LTttCtt12AY.250.000006
ORF1ab/nsp2437F437LttTttA22AY.34.10.00102
ORF1ab/nsp2437F437LTttCtt12AY.99.20.000092
ORF1ab/nsp2437F437LttTttA12AY.99.20.000092
ORF1ab/nsp2437F437LTttCtt22B.1.1770.000026
ORF1ab/nsp2437F437LttTttA22B.1.3510.000059
ORF1ab/nsp2437F437LttTttG22P.1.130.001797
ORF1ab/nsp2437F437LTttCtt11AY.1110.000183
ORF1ab/nsp2437F437LTttCtt11AY.1190.000035
ORF1ab/nsp2437F437LTttCtt11AY.1210.000135
ORF1ab/nsp2437F437LTttCtt11AY.230.00007
ORF1ab/nsp2437F437LTttCtt11AY.240.000431
ORF1ab/nsp2437F437LTttCtt11AY.290.000016
ORF1ab/nsp2437F437LttTttA11AY.380.000499
ORF1ab/nsp2437F437LttTttA11AY.410.000294
ORF1ab/nsp2437F437LTttCtt11AY.470.000031
ORF1ab/nsp2437F437LttTttA11AY.580.000907
ORF1ab/nsp2437F437LttTttA11AY.60.000041
ORF1ab/nsp2437F437LTttCtt11AY.7.20.000559
ORF1ab/nsp2437F437LttTttA11AY.840.000437
ORF1ab/nsp2437F437LTttCtt11AY.850.000427
ORF1ab/nsp2437F437LttTttA11AY.920.000287
ORF1ab/nsp2437F437LTttCtt11AY.980.000079
ORF1ab/nsp2437F437LttTttA11B0.000128
ORF1ab/nsp2437F437LttTttA11B.1.1.1230.017857
ORF1ab/nsp2437F437LTttCtt11B.1.1.250.000569
ORF1ab/nsp2437F437LttTttG11B.1.1.280.000311
ORF1ab/nsp2437F437LttTttA11B.1.1.3480.000796
ORF1ab/nsp2437F437LttTttA11B.1.1.5190.00004
ORF1ab/nsp2437F437LTttCtt11B.1.1.700.000341
ORF1ab/nsp2437F437LTttCtt11B.1.110.30.000718
ORF1ab/nsp2437F437LttTttA11B.1.1260.001276
ORF1ab/nsp2437F437LttTttA11B.1.130.002375
ORF1ab/nsp2437F437LTttCtt11B.1.160.90.007194
ORF1ab/nsp2437F437LTttCtt11B.1.177.150.000631
ORF1ab/nsp2437F437LTttCtt11B.1.177.560.000668
ORF1ab/nsp2437F437LttTttA11B.1.1890.004292
ORF1ab/nsp2437F437LttTttA11B.1.20.000009
ORF1ab/nsp2437F437LttTttA11B.1.2210.000071
ORF1ab/nsp2437F437LttTttG11B.1.2340.000132
ORF1ab/nsp2437F437LTttCtt11B.1.4000.000429
ORF1ab/nsp2437F437LTttCtt11B.1.6280.000352
ORF1ab/nsp2437F437LttTttA11B.550.00295
ORF1ab/nsp2437F437LTttCtt11D.20.000075
ORF1ab/nsp2437F437LttTttA11P.1.70.000319
ORF1ab/nsp2437F437LTttCtt11R.10.00009