CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = E575D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2575E575DE755DnonsyngaAgaT90480.5333332528-2530
ORF1ab/nsp2575E575DE755DnonsyngaAgaC90420.4666672528-2530

Details of the mutation E575D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2575E575DgaAgaT4890All0.000009
ORF1ab/nsp2575E575DgaAgaC4290All0.000008
ORF1ab/nsp2575E575DgaAgaT1213B.1.4270.000606
ORF1ab/nsp2575E575DgaAgaC113B.1.4270.00005
ORF1ab/nsp2575E575DgaAgaT1111B.1.5260.000259
ORF1ab/nsp2575E575DgaAgaC710B.1.1.70.000006
ORF1ab/nsp2575E575DgaAgaT310B.1.1.70.000003
ORF1ab/nsp2575E575DgaAgaT79AY.40.000011
ORF1ab/nsp2575E575DgaAgaC29AY.40.000003
ORF1ab/nsp2575E575DgaAgaC77AY.30.00007
ORF1ab/nsp2575E575DgaAgaC66B.1.177.120.00091
ORF1ab/nsp2575E575DgaAgaC66B.1.5640.002555
ORF1ab/nsp2575E575DgaAgaT45B.1.617.20.000015
ORF1ab/nsp2575E575DgaAgaC15B.1.617.20.000004
ORF1ab/nsp2575E575DgaAgaC23AY.430.000009
ORF1ab/nsp2575E575DgaAgaT13AY.430.000004
ORF1ab/nsp2575E575DgaAgaT33B.1.1770.00004
ORF1ab/nsp2575E575DgaAgaC22AY.46.40.000329
ORF1ab/nsp2575E575DgaAgaC22B.1.20.000018
ORF1ab/nsp2575E575DgaAgaC22B.1.6210.000177
ORF1ab/nsp2575E575DgaAgaT11AY.1020.000027
ORF1ab/nsp2575E575DgaAgaT11AY.230.00007
ORF1ab/nsp2575E575DgaAgaT11AY.250.000006
ORF1ab/nsp2575E575DgaAgaC11AY.330.000067
ORF1ab/nsp2575E575DgaAgaC11AY.550.000917
ORF1ab/nsp2575E575DgaAgaT11AY.800.001129
ORF1ab/nsp2575E575DgaAgaT11AY.99.20.000092
ORF1ab/nsp2575E575DgaAgaC11B.1.1.4480.002033
ORF1ab/nsp2575E575DgaAgaT11B.1.177.600.000218
ORF1ab/nsp2575E575DgaAgaC11B.1.36.220.001208
ORF1ab/nsp2575E575DgaAgaT11P.10.000016