CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = E442del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2442E442del1E622del1delgAag-a27250.9259262129-2131
ORF1ab/nsp2442E442del1E622del1delGaa-aa2720.07407412129-2131

Details of the mutation E442del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2442E442del1gAag-a2527All0.000005
ORF1ab/nsp2442E442del1Gaa-aa227All0
ORF1ab/nsp2442E442del1gAag-a77B.1.20.000062
ORF1ab/nsp2442E442del1gAag-a66B.1.1.70.000005
ORF1ab/nsp2442E442del1gAag-a33AY.440.000018
ORF1ab/nsp2442E442del1gAag-a22AY.120.10.000642
ORF1ab/nsp2442E442del1gAag-a11AY.1030.000006
ORF1ab/nsp2442E442del1Gaa-aa11AY.1190.000035
ORF1ab/nsp2442E442del1gAag-a11AY.430.000004
ORF1ab/nsp2442E442del1gAag-a11B.10.000009
ORF1ab/nsp2442E442del1gAag-a11B.1.10.000018
ORF1ab/nsp2442E442del1gAag-a11B.1.1430.021277
ORF1ab/nsp2442E442del1Gaa-aa11B.1.2340.000132
ORF1ab/nsp2442E442del1gAag-a11B.1.5960.000087
ORF1ab/nsp2442E442del1gAag-a11B.1.617.20.000004