CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = E442X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2442E442XE622XnonsynGaaTaa13110.8461542129-2131
ORF1ab/nsp2442E442XE622XnonsynGAaTGa1320.1538462129-2131

Details of the mutation E442X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2442E442XGaaTaa1113All0.000002
ORF1ab/nsp2442E442XGAaTGa213All0
ORF1ab/nsp2442E442XGaaTaa230.111111
ORF1ab/nsp2442E442XGAaTGa130.055556
ORF1ab/nsp2442E442XGaaTaa33B.10.000027
ORF1ab/nsp2442E442XGAaTGa12B.1.10.000018
ORF1ab/nsp2442E442XGaaTaa12B.1.10.000018
ORF1ab/nsp2442E442XGaaTaa11AY.260.000028
ORF1ab/nsp2442E442XGaaTaa11AY.920.000287
ORF1ab/nsp2442E442XGaaTaa11B0.000128
ORF1ab/nsp2442E442XGaaTaa11B.410.008
ORF1ab/nsp2442E442XGaaTaa11B.6.60.000889