CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = E201D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2201E201DE381DnonsyngaGgaT124712370.9919811406-1408
ORF1ab/nsp2201E201DE381DnonsyngaGgaC1247100.008019251406-1408

Details of the mutation E201D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2201E201DgaGgaT12371247All0.000237
ORF1ab/nsp2201E201DgaGgaC101247All0.000002
ORF1ab/nsp2201E201DgaGgaT581581B.1.160.170.988095
ORF1ab/nsp2201E201DgaGgaT117118B.1.1.70.000105
ORF1ab/nsp2201E201DgaGgaC1118B.1.1.70.000001
ORF1ab/nsp2201E201DgaGgaT9696AY.430.000425
ORF1ab/nsp2201E201DgaGgaT6565B.1.617.20.000245
ORF1ab/nsp2201E201DgaGgaT6263AY.40.000096
ORF1ab/nsp2201E201DgaGgaC163AY.40.000002
ORF1ab/nsp2201E201DgaGgaT4444AY.250.000265
ORF1ab/nsp2201E201DgaGgaT1919AY.30.000189
ORF1ab/nsp2201E201DgaGgaT1818B.1.5960.001568
ORF1ab/nsp2201E201DgaGgaT1717AY.1030.000106
ORF1ab/nsp2201E201DgaGgaT1117AY.440.000067
ORF1ab/nsp2201E201DgaGgaC617AY.440.000037
ORF1ab/nsp2201E201DgaGgaT1414AY.4.20.000304
ORF1ab/nsp2201E201DgaGgaT1414P.10.000221
ORF1ab/nsp2201E201DgaGgaT1111AY.460.001145
ORF1ab/nsp2201E201DgaGgaT1010B.1.1600.000312
ORF1ab/nsp2201E201DgaGgaT99AY.1190.000318
ORF1ab/nsp2201E201DgaGgaT99AY.390.000222
ORF1ab/nsp2201E201DgaGgaT88AY.320.00426
ORF1ab/nsp2201E201DgaGgaT88AY.50.000165
ORF1ab/nsp2201E201DgaGgaT77AY.1020.000186
ORF1ab/nsp2201E201DgaGgaT77AY.98.10.000339
ORF1ab/nsp2201E201DgaGgaT66A.280.015873
ORF1ab/nsp2201E201DgaGgaT66B.1.5580.027397
ORF1ab/nsp2201E201DgaGgaT55B.10.000046
ORF1ab/nsp2201E201DgaGgaT44AY.230.000279
ORF1ab/nsp2201E201DgaGgaT44B.1.1280.002541
ORF1ab/nsp2201E201DgaGgaT44B.1.5070.044944
ORF1ab/nsp2201E201DgaGgaT44P.1.170.000647
ORF1ab/nsp2201E201DgaGgaT33AY.200.000117
ORF1ab/nsp2201E201DgaGgaT33AY.270.000194
ORF1ab/nsp2201E201DgaGgaT33AY.4.50.000322
ORF1ab/nsp2201E201DgaGgaT33AY.750.000168
ORF1ab/nsp2201E201DgaGgaT33B.1.1.5190.000119
ORF1ab/nsp2201E201DgaGgaT33B.1.20.000026
ORF1ab/nsp2201E201DgaGgaT33B.1.5260.000071
ORF1ab/nsp2201E201DgaGgaT22AY.260.000057
ORF1ab/nsp2201E201DgaGgaT22AY.290.000032
ORF1ab/nsp2201E201DgaGgaT22AY.3.10.000171
ORF1ab/nsp2201E201DgaGgaT22AY.330.000134
ORF1ab/nsp2201E201DgaGgaT22AY.610.00021
ORF1ab/nsp2201E201DgaGgaT22AY.730.001331
ORF1ab/nsp2201E201DgaGgaT22B.1.10.000036
ORF1ab/nsp2201E201DgaGgaT22B.1.1.3540.008772
ORF1ab/nsp2201E201DgaGgaT12B.1.3510.00003
ORF1ab/nsp2201E201DgaGgaC12B.1.3510.00003
ORF1ab/nsp2201E201DgaGgaT22B.1.36.190.018519
ORF1ab/nsp2201E201DgaGgaT22B.1.617.10.000258
ORF1ab/nsp2201E201DgaGgaT22P.1.150.000465
ORF1ab/nsp2201E201DgaGgaT11AY.1000.000046
ORF1ab/nsp2201E201DgaGgaT11AY.1200.000037
ORF1ab/nsp2201E201DgaGgaT11AY.130.000161
ORF1ab/nsp2201E201DgaGgaT11AY.34.10.00051
ORF1ab/nsp2201E201DgaGgaT11AY.360.000148
ORF1ab/nsp2201E201DgaGgaT11AY.46.60.000072
ORF1ab/nsp2201E201DgaGgaT11AY.470.000031
ORF1ab/nsp2201E201DgaGgaT11AY.580.000907
ORF1ab/nsp2201E201DgaGgaT11AY.680.000274
ORF1ab/nsp2201E201DgaGgaT11AY.70.000196
ORF1ab/nsp2201E201DgaGgaT11AY.840.000437
ORF1ab/nsp2201E201DgaGgaT11AY.90.000068
ORF1ab/nsp2201E201DgaGgaT11AY.910.00073
ORF1ab/nsp2201E201DgaGgaT11AY.980.000079
ORF1ab/nsp2201E201DgaGgaT11B.1.1.280.000311
ORF1ab/nsp2201E201DgaGgaT11B.1.1.3050.003861
ORF1ab/nsp2201E201DgaGgaT11B.1.1.390.00051
ORF1ab/nsp2201E201DgaGgaT11B.1.160.150.00495
ORF1ab/nsp2201E201DgaGgaT11B.1.1770.000013
ORF1ab/nsp2201E201DgaGgaT11B.1.177.100.000878
ORF1ab/nsp2201E201DgaGgaT11B.1.177.120.000152
ORF1ab/nsp2201E201DgaGgaT11B.1.177.200.001517
ORF1ab/nsp2201E201DgaGgaT11B.1.177.540.000606
ORF1ab/nsp2201E201DgaGgaT11B.1.214.20.0006
ORF1ab/nsp2201E201DgaGgaT11B.1.2210.000071
ORF1ab/nsp2201E201DgaGgaC11B.1.2430.00007
ORF1ab/nsp2201E201DgaGgaT11B.1.351.30.000876
ORF1ab/nsp2201E201DgaGgaT11B.1.3620.001541
ORF1ab/nsp2201E201DgaGgaT11B.1.3990.001934
ORF1ab/nsp2201E201DgaGgaT11C.350.000774
ORF1ab/nsp2201E201DgaGgaT11C.370.000116
ORF1ab/nsp2201E201DgaGgaT11D.20.000075
ORF1ab/nsp2201E201DgaGgaT11P.20.000187
ORF1ab/nsp2201E201DgaGgaT11Q.80.000165