CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = E172X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2172E172XE352XnonsynGaaTaa1471310.8911561319-1321
ORF1ab/nsp2172E172XE352XnonsynGAaTGa147110.07482991319-1321
ORF1ab/nsp2172E172XE352XnonsynGaATaG14750.03401361319-1321

Details of the mutation E172X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2172E172XGaaTaa131147All0.000025
ORF1ab/nsp2172E172XGAaTGa11147All0.000002
ORF1ab/nsp2172E172XGaATaG5147All0.000001
ORF1ab/nsp2172E172XGaaTaa3333AY.40.000051
ORF1ab/nsp2172E172XGaaTaa2323AY.4.50.002472
ORF1ab/nsp2172E172XGaaTaa1317B.10.000119
ORF1ab/nsp2172E172XGAaTGa317B.10.000027
ORF1ab/nsp2172E172XGaATaG117B.10.000009
ORF1ab/nsp2172E172XGaaTaa710B.1.10.000127
ORF1ab/nsp2172E172XGAaTGa210B.1.10.000036
ORF1ab/nsp2172E172XGaATaG110B.1.10.000018
ORF1ab/nsp2172E172XGaaTaa66D.20.00045
ORF1ab/nsp2172E172XGaaTaa55AY.90.000338
ORF1ab/nsp2172E172XGaaTaa45B.1.1770.000053
ORF1ab/nsp2172E172XGAaTGa15B.1.1770.000013
ORF1ab/nsp2172E172XGaaTaa44AY.80.002424
ORF1ab/nsp2172E172XGaaTaa44B.1.1.70.000004
ORF1ab/nsp2172E172XGaaTaa23AY.1200.000074
ORF1ab/nsp2172E172XGaATaG13AY.1200.000037
ORF1ab/nsp2172E172XGaaTaa23B.1.1600.000062
ORF1ab/nsp2172E172XGAaTGa13B.1.1600.000031
ORF1ab/nsp2172E172XGaaTaa22AY.580.001815
ORF1ab/nsp2172E172XGaaTaa12B.1.1.1700.001247
ORF1ab/nsp2172E172XGaATaG12B.1.1.1700.001247
ORF1ab/nsp2172E172XGAaTGa12B.1.1.2770.000759
ORF1ab/nsp2172E172XGaaTaa12B.1.1.2770.000759
ORF1ab/nsp2172E172XGaaTaa12B.1.177.350.000691
ORF1ab/nsp2172E172XGAaTGa12B.1.177.350.000691
ORF1ab/nsp2172E172XGAaTGa12B.1.2210.000071
ORF1ab/nsp2172E172XGaaTaa12B.1.2210.000071
ORF1ab/nsp2172E172XGaaTaa12B.1.2580.000067
ORF1ab/nsp2172E172XGAaTGa12B.1.2580.000067
ORF1ab/nsp2172E172XGaaTaa12B.1.6300.005236
ORF1ab/nsp2172E172XGaATaG12B.1.6300.005236
ORF1ab/nsp2172E172XGaaTaa110.055556
ORF1ab/nsp2172E172XGaaTaa11A.2.50.000499
ORF1ab/nsp2172E172XGaaTaa11AY.1000.000046
ORF1ab/nsp2172E172XGaaTaa11AY.1210.000135
ORF1ab/nsp2172E172XGaaTaa11AY.170.008197
ORF1ab/nsp2172E172XGaaTaa11AY.400.000964
ORF1ab/nsp2172E172XGaaTaa11AY.870.000833
ORF1ab/nsp2172E172XGaaTaa11AY.980.000079
ORF1ab/nsp2172E172XGaaTaa11B.1.1.3720.000689
ORF1ab/nsp2172E172XGaaTaa11B.1.1.3850.004464
ORF1ab/nsp2172E172XGaaTaa11B.1.177.440.000519
ORF1ab/nsp2172E172XGaaTaa11B.1.177.70.000165
ORF1ab/nsp2172E172XGaaTaa11B.1.177.770.000726
ORF1ab/nsp2172E172XGaaTaa11B.1.1890.004292
ORF1ab/nsp2172E172XGaaTaa11B.1.2230.002778
ORF1ab/nsp2172E172XGaaTaa11B.1.4530.003236
ORF1ab/nsp2172E172XGaaTaa11B.1.5990.00365
ORF1ab/nsp2172E172XGaaTaa11B.1.617.20.000004
ORF1ab/nsp2172E172XGaaTaa11K.10.02381
ORF1ab/nsp2172E172XGaaTaa11P.10.000016