CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = E172D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2172E172DE352DnonsyngaAgaC395139310.9949381319-1321
ORF1ab/nsp2172E172DE352DnonsyngaAgaT3951200.005062011319-1321

Details of the mutation E172D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2172E172DgaAgaC39313951All0.000752
ORF1ab/nsp2172E172DgaAgaT203951All0.000004
ORF1ab/nsp2172E172DgaAgaC18891889AY.40.00294
ORF1ab/nsp2172E172DgaAgaC18821882B.1.1.1760.826889
ORF1ab/nsp2172E172DgaAgaC3838B0.004857
ORF1ab/nsp2172E172DgaAgaC3333B.1.617.20.000124
ORF1ab/nsp2172E172DgaAgaC1920B.1.10.000345
ORF1ab/nsp2172E172DgaAgaT120B.1.10.000018
ORF1ab/nsp2172E172DgaAgaC1414AY.390.000346
ORF1ab/nsp2172E172DgaAgaC99AY.350.002097
ORF1ab/nsp2172E172DgaAgaC77AS.10.066667
ORF1ab/nsp2172E172DgaAgaT56B.1.1.70.000004
ORF1ab/nsp2172E172DgaAgaC16B.1.1.70.000001
ORF1ab/nsp2172E172DgaAgaC35B.10.000027
ORF1ab/nsp2172E172DgaAgaT25B.10.000018
ORF1ab/nsp2172E172DgaAgaC44AY.430.000018
ORF1ab/nsp2172E172DgaAgaT33B.1.351.30.002629
ORF1ab/nsp2172E172DgaAgaC22AY.1030.000012
ORF1ab/nsp2172E172DgaAgaT12AY.200.000039
ORF1ab/nsp2172E172DgaAgaC12AY.200.000039
ORF1ab/nsp2172E172DgaAgaC22AY.270.000129
ORF1ab/nsp2172E172DgaAgaC22AY.440.000012
ORF1ab/nsp2172E172DgaAgaC22AY.50.000041
ORF1ab/nsp2172E172DgaAgaC22AY.610.00021
ORF1ab/nsp2172E172DgaAgaC22AY.870.001665
ORF1ab/nsp2172E172DgaAgaT12B.1.1770.000013
ORF1ab/nsp2172E172DgaAgaC12B.1.1770.000013
ORF1ab/nsp2172E172DgaAgaC22P.10.000032
ORF1ab/nsp2172E172DgaAgaC22P.1.10.000635
ORF1ab/nsp2172E172DgaAgaT22P.1.140.000096
ORF1ab/nsp2172E172DgaAgaT11A.2.50.000499
ORF1ab/nsp2172E172DgaAgaT11AY.1010.00049
ORF1ab/nsp2172E172DgaAgaC11AY.1020.000027
ORF1ab/nsp2172E172DgaAgaC11AY.250.000006
ORF1ab/nsp2172E172DgaAgaT11AY.260.000028
ORF1ab/nsp2172E172DgaAgaC11AY.39.1.10.000725
ORF1ab/nsp2172E172DgaAgaC11AY.420.00004
ORF1ab/nsp2172E172DgaAgaC11AY.46.50.000198
ORF1ab/nsp2172E172DgaAgaC11AY.480.000465
ORF1ab/nsp2172E172DgaAgaC11AY.5.30.000337
ORF1ab/nsp2172E172DgaAgaC11AY.540.000095
ORF1ab/nsp2172E172DgaAgaC11AY.60.000041
ORF1ab/nsp2172E172DgaAgaC11AY.700.000209
ORF1ab/nsp2172E172DgaAgaC11B.1.1.100.001115
ORF1ab/nsp2172E172DgaAgaC11B.1.2400.000216
ORF1ab/nsp2172E172DgaAgaT11B.1.240.10.025
ORF1ab/nsp2172E172DgaAgaT11B.1.351.20.000303
ORF1ab/nsp2172E172DgaAgaC11B.1.4290.000024
ORF1ab/nsp2172E172DgaAgaC11P.1.170.000162