CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = D7D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp27D7DD187DsyngaTgaC16061160611824-826

Details of the mutation D7D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp27D7DgaTgaC1606116061All0.003072
ORF1ab/nsp27D7DgaTgaC1516115161AY.1180.949818
ORF1ab/nsp27D7DgaTgaC450450B.1.617.20.001694
ORF1ab/nsp27D7DgaTgaC103103B.1.1.70.000092
ORF1ab/nsp27D7DgaTgaC5454AY.390.001334
ORF1ab/nsp27D7DgaTgaC3232AY.40.00005
ORF1ab/nsp27D7DgaTgaC2828AY.430.000124
ORF1ab/nsp27D7DgaTgaC1919B.10.000174
ORF1ab/nsp27D7DgaTgaC1717AY.1030.000106
ORF1ab/nsp27D7DgaTgaC1616AY.440.000097
ORF1ab/nsp27D7DgaTgaC1515AK.20.681818
ORF1ab/nsp27D7DgaTgaC1212AY.1170.001014
ORF1ab/nsp27D7DgaTgaC1111AY.920.00316
ORF1ab/nsp27D7DgaTgaC99AY.330.000601
ORF1ab/nsp27D7DgaTgaC88AY.250.000048
ORF1ab/nsp27D7DgaTgaC88AY.4.20.000174
ORF1ab/nsp27D7DgaTgaC77B0.000895
ORF1ab/nsp27D7DgaTgaC66AY.1020.000159
ORF1ab/nsp27D7DgaTgaC66AY.9.20.00022
ORF1ab/nsp27D7DgaTgaC66B.1.3510.000178
ORF1ab/nsp27D7DgaTgaC66B.1.5610.002382
ORF1ab/nsp27D7DgaTgaC44AY.260.000113
ORF1ab/nsp27D7DgaTgaC44AY.460.000416
ORF1ab/nsp27D7DgaTgaC44B.1.1770.000053
ORF1ab/nsp27D7DgaTgaC44B.1.2580.000266
ORF1ab/nsp27D7DgaTgaC44B.1.4290.000094
ORF1ab/nsp27D7DgaTgaC33AY.1040.005952
ORF1ab/nsp27D7DgaTgaC33AY.39.10.000119
ORF1ab/nsp27D7DgaTgaC33AY.420.000121
ORF1ab/nsp27D7DgaTgaC33AY.450.000365
ORF1ab/nsp27D7DgaTgaC33B.1.177.600.000655
ORF1ab/nsp27D7DgaTgaC33B.1.6100.010638
ORF1ab/nsp27D7DgaTgaC22AY.1130.000285
ORF1ab/nsp27D7DgaTgaC22AY.230.000139
ORF1ab/nsp27D7DgaTgaC22AY.320.001065
ORF1ab/nsp27D7DgaTgaC22AY.4.30.001684
ORF1ab/nsp27D7DgaTgaC22AY.4.50.000215
ORF1ab/nsp27D7DgaTgaC22AY.46.30.001867
ORF1ab/nsp27D7DgaTgaC22B.1.1920.018519
ORF1ab/nsp27D7DgaTgaC22B.1.2210.000142
ORF1ab/nsp27D7DgaTgaC22B.1.2340.000264
ORF1ab/nsp27D7DgaTgaC22B.1.5260.000047
ORF1ab/nsp27D7DgaTgaC22C.370.000232
ORF1ab/nsp27D7DgaTgaC110.055556
ORF1ab/nsp27D7DgaTgaC11AU.20.002421
ORF1ab/nsp27D7DgaTgaC11AY.4.2.10.000149
ORF1ab/nsp27D7DgaTgaC11AY.470.000031
ORF1ab/nsp27D7DgaTgaC11AY.50.000021
ORF1ab/nsp27D7DgaTgaC11AY.540.000095
ORF1ab/nsp27D7DgaTgaC11AY.690.000187
ORF1ab/nsp27D7DgaTgaC11AY.750.000056
ORF1ab/nsp27D7DgaTgaC11AY.98.10.000048
ORF1ab/nsp27D7DgaTgaC11B.1.1.1860.003436
ORF1ab/nsp27D7DgaTgaC11B.1.1.2910.000742
ORF1ab/nsp27D7DgaTgaC11B.1.1.3060.000438
ORF1ab/nsp27D7DgaTgaC11B.1.1.630.000386
ORF1ab/nsp27D7DgaTgaC11B.1.177.210.000076
ORF1ab/nsp27D7DgaTgaC11B.1.177.70.000165
ORF1ab/nsp27D7DgaTgaC11B.1.221.30.000833
ORF1ab/nsp27D7DgaTgaC11B.1.3110.000275
ORF1ab/nsp27D7DgaTgaC11B.1.3350.010309
ORF1ab/nsp27D7DgaTgaC11B.1.4090.000781
ORF1ab/nsp27D7DgaTgaC11B.1.4270.00005
ORF1ab/nsp27D7DgaTgaC11B.1.617.10.000129
ORF1ab/nsp27D7DgaTgaC11B.1.621.10.000506
ORF1ab/nsp27D7DgaTgaC11D.20.000075
ORF1ab/nsp27D7DgaTgaC11P.10.000016
ORF1ab/nsp27D7DgaTgaC11P.1.100.000269
ORF1ab/nsp27D7DgaTgaC11P.1.120.000484
ORF1ab/nsp27D7DgaTgaC11Q.40.000455