CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = A419S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2419A419SA599SnonsynGccTcc69680.9855072060-2062
ORF1ab/nsp2419A419SA599SnonsynGCcAGc6910.01449282060-2062

Details of the mutation A419S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2419A419SGccTcc6869All0.000013
ORF1ab/nsp2419A419SGCcAGc169All0
ORF1ab/nsp2419A419SGccTcc3232B.1.1.70.000029
ORF1ab/nsp2419A419SGccTcc88AY.40.000012
ORF1ab/nsp2419A419SGccTcc33AY.440.000018
ORF1ab/nsp2419A419SGccTcc33B.10.000027
ORF1ab/nsp2419A419SGccTcc22AY.1030.000012
ORF1ab/nsp2419A419SGccTcc22AY.30.00002
ORF1ab/nsp2419A419SGccTcc22AY.450.000243
ORF1ab/nsp2419A419SGccTcc22B.1.1770.000026
ORF1ab/nsp2419A419SGccTcc22B.1.20.000018
ORF1ab/nsp2419A419SGccTcc11A.2.20.001689
ORF1ab/nsp2419A419SGccTcc11AY.1140.000231
ORF1ab/nsp2419A419SGccTcc11AY.1170.000085
ORF1ab/nsp2419A419SGccTcc11AY.260.000028
ORF1ab/nsp2419A419SGCcAGc11AY.430.000004
ORF1ab/nsp2419A419SGccTcc11AY.70.000196
ORF1ab/nsp2419A419SGccTcc11B0.000128
ORF1ab/nsp2419A419SGccTcc11B.1.1110.001175
ORF1ab/nsp2419A419SGccTcc11B.1.1600.000031
ORF1ab/nsp2419A419SGccTcc11B.1.2210.000071
ORF1ab/nsp2419A419SGccTcc11B.1.5950.000261
ORF1ab/nsp2419A419SGccTcc11B.1.617.20.000004
ORF1ab/nsp2419A419SGccTcc11D.20.000075