CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = A411T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2411A411TA591TnonsynGctAct29829812036-2038

Details of the mutation A411T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2411A411TGctAct298298All0.000057
ORF1ab/nsp2411A411TGctAct114114B.1.1.70.000102
ORF1ab/nsp2411A411TGctAct2828B.1.617.20.000105
ORF1ab/nsp2411A411TGctAct1717B.1.2430.001183
ORF1ab/nsp2411A411TGctAct1616AY.40.000025
ORF1ab/nsp2411A411TGctAct1515AY.1190.00053
ORF1ab/nsp2411A411TGctAct99Q.40.004093
ORF1ab/nsp2411A411TGctAct88AY.430.000035
ORF1ab/nsp2411A411TGctAct77AY.1150.036458
ORF1ab/nsp2411A411TGctAct77AY.980.000553
ORF1ab/nsp2411A411TGctAct77B.1.617.10.000903
ORF1ab/nsp2411A411TGctAct66AY.250.000036
ORF1ab/nsp2411A411TGctAct66AY.30.00006
ORF1ab/nsp2411A411TGctAct55P.10.000079
ORF1ab/nsp2411A411TGctAct44AY.590.002119
ORF1ab/nsp2411A411TGctAct44AY.9.20.000147
ORF1ab/nsp2411A411TGctAct44B.1.20.000035
ORF1ab/nsp2411A411TGctAct33AY.390.000074
ORF1ab/nsp2411A411TGctAct33AY.9.10.000251
ORF1ab/nsp2411A411TGctAct33B.1.177.70.000495
ORF1ab/nsp2411A411TGctAct22AY.1020.000053
ORF1ab/nsp2411A411TGctAct22AY.120.10.000642
ORF1ab/nsp2411A411TGctAct22AY.200.000078
ORF1ab/nsp2411A411TGctAct22AY.440.000012
ORF1ab/nsp2411A411TGctAct22B.10.000018
ORF1ab/nsp2411A411TGctAct22B.1.5260.000047
ORF1ab/nsp2411A411TGctAct11AY.1030.000006
ORF1ab/nsp2411A411TGctAct11AY.1060.000335
ORF1ab/nsp2411A411TGctAct11AY.1110.000183
ORF1ab/nsp2411A411TGctAct11AY.1160.000287
ORF1ab/nsp2411A411TGctAct11AY.340.000097
ORF1ab/nsp2411A411TGctAct11AY.39.10.00004
ORF1ab/nsp2411A411TGctAct11AY.420.00004
ORF1ab/nsp2411A411TGctAct11AY.470.000031
ORF1ab/nsp2411A411TGctAct11AY.540.000095
ORF1ab/nsp2411A411TGctAct11AY.7.10.000113
ORF1ab/nsp2411A411TGctAct11AY.750.000056
ORF1ab/nsp2411A411TGctAct11AY.98.10.000048
ORF1ab/nsp2411A411TGctAct11B0.000128
ORF1ab/nsp2411A411TGctAct11B.1.1.2790.001121
ORF1ab/nsp2411A411TGctAct11B.1.3620.001541
ORF1ab/nsp2411A411TGctAct11B.1.3660.004878
ORF1ab/nsp2411A411TGctAct11B.1.3690.000285
ORF1ab/nsp2411A411TGctAct11B.1.4290.000024
ORF1ab/nsp2411A411TGctAct11D.20.000075
ORF1ab/nsp2411A411TGctAct11Q.10.000126