CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = A411A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2411A411AA591AsyngcTgcC3062950.9640522036-2038
ORF1ab/nsp2411A411AA591AsyngcTgcA30670.02287582036-2038
ORF1ab/nsp2411A411AA591AsyngcTgcG30640.01307192036-2038

Details of the mutation A411A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2411A411AgcTgcC295306All0.000056
ORF1ab/nsp2411A411AgcTgcA7306All0.000001
ORF1ab/nsp2411A411AgcTgcG4306All0.000001
ORF1ab/nsp2411A411AgcTgcC107107AY.30.001064
ORF1ab/nsp2411A411AgcTgcC5660B.1.1.70.00005
ORF1ab/nsp2411A411AgcTgcG360B.1.1.70.000003
ORF1ab/nsp2411A411AgcTgcA160B.1.1.70.000001
ORF1ab/nsp2411A411AgcTgcC3739AY.40.000058
ORF1ab/nsp2411A411AgcTgcA239AY.40.000003
ORF1ab/nsp2411A411AgcTgcC1616AY.260.000453
ORF1ab/nsp2411A411AgcTgcC1515B.1.617.20.000056
ORF1ab/nsp2411A411AgcTgcC1010AY.9.20.000367
ORF1ab/nsp2411A411AgcTgcC77AY.430.000031
ORF1ab/nsp2411A411AgcTgcA34AY.1020.00008
ORF1ab/nsp2411A411AgcTgcC14AY.1020.000027
ORF1ab/nsp2411A411AgcTgcC44B.1.1770.000053
ORF1ab/nsp2411A411AgcTgcC33AY.1030.000019
ORF1ab/nsp2411A411AgcTgcC33AY.250.000018
ORF1ab/nsp2411A411AgcTgcC33AY.290.000047
ORF1ab/nsp2411A411AgcTgcC33AY.4.20.000065
ORF1ab/nsp2411A411AgcTgcC33B.1.20.000026
ORF1ab/nsp2411A411AgcTgcC33P.10.000047
ORF1ab/nsp2411A411AgcTgcC22AY.160.000759
ORF1ab/nsp2411A411AgcTgcC22AY.400.001929
ORF1ab/nsp2411A411AgcTgcC22AY.440.000012
ORF1ab/nsp2411A411AgcTgcA11A0.000387
ORF1ab/nsp2411A411AgcTgcC11AY.1190.000035
ORF1ab/nsp2411A411AgcTgcC11AY.1210.000135
ORF1ab/nsp2411A411AgcTgcC11AY.200.000039
ORF1ab/nsp2411A411AgcTgcC11AY.230.00007
ORF1ab/nsp2411A411AgcTgcC11AY.470.000031
ORF1ab/nsp2411A411AgcTgcC11AY.60.000041
ORF1ab/nsp2411A411AgcTgcC11AY.650.000533
ORF1ab/nsp2411A411AgcTgcC11AY.90.000068
ORF1ab/nsp2411A411AgcTgcC11B.10.000009
ORF1ab/nsp2411A411AgcTgcC11B.1.1.250.000569
ORF1ab/nsp2411A411AgcTgcC11B.1.1.5190.00004
ORF1ab/nsp2411A411AgcTgcC11B.1.160.150.00495
ORF1ab/nsp2411A411AgcTgcG11B.1.160.90.007194
ORF1ab/nsp2411A411AgcTgcC11B.1.2430.00007
ORF1ab/nsp2411A411AgcTgcC11B.1.2740.011905
ORF1ab/nsp2411A411AgcTgcC11B.1.360.000146
ORF1ab/nsp2411A411AgcTgcC11B.1.3690.000285
ORF1ab/nsp2411A411AgcTgcC11B.1.416.10.001563
ORF1ab/nsp2411A411AgcTgcC11B.1.5250.000113