CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 385 | A385A | A565A | syn | gcC | gcT | 3079 | 2842 | 0.923027 | 1958-1960 |
ORF1ab/nsp2 | 385 | A385A | A565A | syn | gcC | gcA | 3079 | 227 | 0.0737252 | 1958-1960 |
ORF1ab/nsp2 | 385 | A385A | A565A | syn | gcC | gcG | 3079 | 10 | 0.00324781 | 1958-1960 |
Details of the mutation A385A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2842 | 3079 | All | 0.000544 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 227 | 3079 | All | 0.000043 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcG | 10 | 3079 | All | 0.000002 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 393 | 396 | AY.4 | 0.000612 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 2 | 396 | AY.4 | 0.000003 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcG | 1 | 396 | AY.4 | 0.000002 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 318 | 342 | B.1.1.7 | 0.000285 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 18 | 342 | B.1.1.7 | 0.000016 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcG | 6 | 342 | B.1.1.7 | 0.000005 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 193 | 301 | AY.103 | 0.001198 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 108 | 301 | AY.103 | 0.000671 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 218 | 218 | AY.111 | 0.039927 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 165 | 165 | B.1.1.138 | 1 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 151 | 152 | B.1.1.519 | 0.005996 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 152 | B.1.1.519 | 0.00004 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 140 | 140 | B.1.2 | 0.001233 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 108 | 111 | AY.25 | 0.00065 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 2 | 111 | AY.25 | 0.000012 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcG | 1 | 111 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 67 | 99 | AY.43 | 0.000297 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 32 | 99 | AY.43 | 0.000142 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 68 | 69 | AY.3 | 0.000676 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 69 | AY.3 | 0.00001 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 68 | 68 | AY.118 | 0.00426 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 56 | 57 | B.1.177 | 0.000737 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcG | 1 | 57 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 53 | 54 | B.1.617.2 | 0.0002 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 54 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 50 | 50 | B.1.575 | 0.01517 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 45 | 49 | P.1 | 0.000709 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 4 | 49 | P.1 | 0.000063 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 47 | 48 | B.1.1 | 0.000853 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 48 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 47 | 47 | B.1.160 | 0.001466 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 46 | 46 | AY.102 | 0.00122 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 44 | 44 | A.21 | 0.121884 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 37 | 37 | P.1.14 | 0.001769 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 36 | 36 | B.1.36 | 0.005252 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 30 | 30 | B.1.221 | 0.002131 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 22 | 27 | B.1 | 0.000202 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 4 | 27 | B.1 | 0.000037 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcG | 1 | 27 | B.1 | 0.000009 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 24 | 24 | AY.44 | 0.000146 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 23 | 23 | AY.26 | 0.000651 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 17 | 17 | B.1.1.46 | 0.074236 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 16 | 16 | AY.41 | 0.004703 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 16 | 16 | B.1.367 | 0.012678 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 11 | 15 | B.1.1.214 | 0.00061 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 15 | B.1.1.214 | 0.000222 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 14 | 14 | AY.29 | 0.000221 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 14 | 14 | AY.85 | 0.00598 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 13 | 13 | B.1.429 | 0.000306 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 12 | 12 | B.1.351 | 0.000357 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 8 | 11 | AY.46 | 0.000833 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 11 | AY.46 | 0.000312 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 10 | 10 | AY.39 | 0.000247 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 9 | 10 | P.2 | 0.00168 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 10 | P.2 | 0.000187 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 9 | 9 | B.1.525 | 0.001018 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 8 | 8 | AD.2 | 0.001752 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 8 | 8 | AY.5 | 0.000165 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 8 | 8 | B.1.1.284 | 0.000859 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 7 | 7 | AY.100 | 0.000322 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 6 | 7 | AY.47 | 0.000187 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 7 | AY.47 | 0.000031 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 7 | 7 | B.1.214.2 | 0.004197 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 5 | 6 | AY.3.1 | 0.000426 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 6 | AY.3.1 | 0.000085 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 6 | 6 | AY.75 | 0.000336 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 5 | 6 | B.1.243 | 0.000348 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 6 | B.1.243 | 0.00007 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 5 | 5 | AY.10 | 0.00265 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 5 | AY.20 | 0.000155 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 5 | AY.20 | 0.000039 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 3 | 5 | AY.23 | 0.000209 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 5 | AY.23 | 0.000139 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 5 | AY.33 | 0.000267 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 5 | AY.33 | 0.000067 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 5 | 5 | AY.46.1 | 0.005133 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 4 | B | 0.000383 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 4 | B | 0.000128 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 4 | B.1.1.432 | 0.005063 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 4 | B.1.1.63 | 0.001543 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 4 | B.1.177.8 | 0.00301 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 4 | B.1.621.1 | 0.002023 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 4 | 4 | B.1.637 | 0.000292 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | AY.117 | 0.000254 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | AY.57 | 0.001969 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | AY.63 | 0.001161 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | AY.84 | 0.001312 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 3 | AY.9.2 | 0.000073 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 3 | AY.9.2 | 0.000037 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | AY.99.2 | 0.000276 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | B.1.1.409 | 0.008499 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | B.1.1.521 | 0.016043 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 3 | 3 | Q.1 | 0.000379 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 2 | AY.110 | 0.000113 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 2 | AY.110 | 0.000113 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.4.1 | 0.001475 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.4.4 | 0.000818 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.77 | 0.002255 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.87 | 0.001665 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | B.1.1.351 | 0.005587 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | B.1.160.25 | 0.022222 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | B.1.177.58 | 0.002663 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | B.1.462 | 0.014493 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 2 | B.1.580 | 0.004065 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 2 | B.1.580 | 0.004065 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 2 | B.1.596 | 0.000087 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 2 | B.1.596 | 0.000087 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.1.362 | 0.005618 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.1.425 | 0.045455 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.149 | 0.003425 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 1 | B.1.428.3 | 0.012821 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcA | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.596.1 | 0.009346 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | B.29 | 0.003509 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | P.1.10.1 | 0.00813 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp2 | 385 | A385A | gcC | gcT | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|