CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = A1T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp21A1TA181TnonsynGcaAca274927480.999636806-808
ORF1ab/nsp21A1TA181TnonsynGcAAcC274910.000363769806-808

Details of the mutation A1T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp21A1TGcaAca27482749All0.000526
ORF1ab/nsp21A1TGcAAcC12749All0
ORF1ab/nsp21A1TGcaAca17371737B.1.2430.120868
ORF1ab/nsp21A1TGcaAca174174B.1.1.70.000156
ORF1ab/nsp21A1TGcaAca118118B.1.5640.050256
ORF1ab/nsp21A1TGcaAca115115AY.40.000179
ORF1ab/nsp21A1TGcaAca9090AY.900.061602
ORF1ab/nsp21A1TGcaAca8989B.10.000815
ORF1ab/nsp21A1TGcaAca6969B.1.243.21
ORF1ab/nsp21A1TGcaAca4242B.1.5260.000987
ORF1ab/nsp21A1TGcaAca3232AY.30.000318
ORF1ab/nsp21A1TGcaAca3030B.1.1990.123967
ORF1ab/nsp21A1TGcaAca2121B.1.617.20.000079
ORF1ab/nsp21A1TGcaAca1919AY.250.000114
ORF1ab/nsp21A1TGcaAca1515B.1.20.000132
ORF1ab/nsp21A1TGcaAca1111AY.1030.000068
ORF1ab/nsp21A1TGcaAca1010AY.34.10.005099
ORF1ab/nsp21A1TGcaAca1010AY.430.000044
ORF1ab/nsp21A1TGcaAca1010P.10.000158
ORF1ab/nsp21A1TGcaAca99B.1.177.400.046392
ORF1ab/nsp21A1TGcaAca77AY.440.000043
ORF1ab/nsp21A1TGcaAca77B.1.1770.000092
ORF1ab/nsp21A1TGcaAca66B.1.10.000109
ORF1ab/nsp21A1TGcaAca55AY.390.000124
ORF1ab/nsp21A1TGcaAca55AY.710.002375
ORF1ab/nsp21A1TGcaAca44AY.9.20.000147
ORF1ab/nsp21A1TGcaAca44B.1.2400.000862
ORF1ab/nsp21A1TGcaAca33AV.10.015152
ORF1ab/nsp21A1TGcaAca33AY.1020.00008
ORF1ab/nsp21A1TGcaAca33AY.1130.000427
ORF1ab/nsp21A1TGcaAca33B.1.1600.000094
ORF1ab/nsp21A1TGcaAca33B.1.2580.0002
ORF1ab/nsp21A1TGcaAca33B.1.3490.002144
ORF1ab/nsp21A1TGcaAca33B.1.4270.000151
ORF1ab/nsp21A1TGcaAca33B.1.6210.000266
ORF1ab/nsp21A1TGcaAca33B.1.6370.000219
ORF1ab/nsp21A1TGcaAca33P.1.70.000958
ORF1ab/nsp21A1TGcaAca33P.70.0131
ORF1ab/nsp21A1TGcAAcC120.055556
ORF1ab/nsp21A1TGcaAca120.055556
ORF1ab/nsp21A1TGcaAca22AY.1060.00067
ORF1ab/nsp21A1TGcaAca22AY.200.000078
ORF1ab/nsp21A1TGcaAca22AY.230.000139
ORF1ab/nsp21A1TGcaAca22AY.290.000032
ORF1ab/nsp21A1TGcaAca22AY.320.001065
ORF1ab/nsp21A1TGcaAca22AY.4.20.000043
ORF1ab/nsp21A1TGcaAca22AY.90.000135
ORF1ab/nsp21A1TGcaAca22B.1.1.1570.001826
ORF1ab/nsp21A1TGcaAca22B.1.1.3480.001592
ORF1ab/nsp21A1TGcaAca22B.1.1.5190.000079
ORF1ab/nsp21A1TGcaAca22B.1.3990.003868
ORF1ab/nsp21A1TGcaAca22B.1.5760.001813
ORF1ab/nsp21A1TGcaAca22B.1.5960.000174
ORF1ab/nsp21A1TGcaAca22Q.10.000253
ORF1ab/nsp21A1TGcaAca11A.20.000662
ORF1ab/nsp21A1TGcaAca11AM.20.111111
ORF1ab/nsp21A1TGcaAca11AU.20.002421
ORF1ab/nsp21A1TGcaAca11AY.100.00053
ORF1ab/nsp21A1TGcaAca11AY.1090.00074
ORF1ab/nsp21A1TGcaAca11AY.1160.000287
ORF1ab/nsp21A1TGcaAca11AY.1170.000085
ORF1ab/nsp21A1TGcaAca11AY.270.000065
ORF1ab/nsp21A1TGcaAca11AY.3.10.000085
ORF1ab/nsp21A1TGcaAca11AY.330.000067
ORF1ab/nsp21A1TGcaAca11AY.4.50.000107
ORF1ab/nsp21A1TGcaAca11AY.420.00004
ORF1ab/nsp21A1TGcaAca11AY.460.000104
ORF1ab/nsp21A1TGcaAca11AY.46.60.000072
ORF1ab/nsp21A1TGcaAca11AY.50.000021
ORF1ab/nsp21A1TGcaAca11AY.510.000909
ORF1ab/nsp21A1TGcaAca11AY.60.000041
ORF1ab/nsp21A1TGcaAca11AY.610.000105
ORF1ab/nsp21A1TGcaAca11AY.7.10.000113
ORF1ab/nsp21A1TGcaAca11AY.75.10.00018
ORF1ab/nsp21A1TGcaAca11B.1.1.2200.001859
ORF1ab/nsp21A1TGcaAca11B.1.1.330.000421
ORF1ab/nsp21A1TGcaAca11B.1.1.3720.000689
ORF1ab/nsp21A1TGcaAca11B.1.1050.009615
ORF1ab/nsp21A1TGcaAca11B.1.1100.004525
ORF1ab/nsp21A1TGcaAca11B.1.2210.000071
ORF1ab/nsp21A1TGcaAca11B.1.221.30.000833
ORF1ab/nsp21A1TGcaAca11B.1.2320.000537
ORF1ab/nsp21A1TGcaAca11B.1.2340.000132
ORF1ab/nsp21A1TGcaAca11B.1.243.10.022222
ORF1ab/nsp21A1TGcaAca11B.1.2470.014925
ORF1ab/nsp21A1TGcaAca11B.1.258.20.004505
ORF1ab/nsp21A1TGcaAca11B.1.2890.00266
ORF1ab/nsp21A1TGcaAca11B.1.3110.000275
ORF1ab/nsp21A1TGcaAca11B.1.3670.000792
ORF1ab/nsp21A1TGcaAca11B.1.3690.000285
ORF1ab/nsp21A1TGcaAca11B.1.3970.004854
ORF1ab/nsp21A1TGcaAca11B.1.4290.000024
ORF1ab/nsp21A1TGcaAca11B.1.466.20.000391
ORF1ab/nsp21A1TGcaAca11B.1.6090.000479
ORF1ab/nsp21A1TGcaAca11B.1.6160.02439
ORF1ab/nsp21A1TGcaAca11B.1.780.008547
ORF1ab/nsp21A1TGcaAca11C.1.20.004255
ORF1ab/nsp21A1TGcaAca11C.170.055556
ORF1ab/nsp21A1TGcaAca11P.1.140.000048
ORF1ab/nsp21A1TGcaAca11P.1.150.000232
ORF1ab/nsp21A1TGcaAca11P.20.000187