CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = A1S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp21A1SA181SnonsynGcaTca95951806-808

Details of the mutation A1S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp21A1SGcaTca9595All0.000018
ORF1ab/nsp21A1SGcaTca3434AY.430.000151
ORF1ab/nsp21A1SGcaTca1212AY.40.000019
ORF1ab/nsp21A1SGcaTca77AY.1030.000043
ORF1ab/nsp21A1SGcaTca66B.1.617.20.000023
ORF1ab/nsp21A1SGcaTca44AY.1020.000106
ORF1ab/nsp21A1SGcaTca44AY.1130.00057
ORF1ab/nsp21A1SGcaTca44AY.440.000024
ORF1ab/nsp21A1SGcaTca33B.1.1.70.000003
ORF1ab/nsp21A1SGcaTca22B.1.5960.000174
ORF1ab/nsp21A1SGcaTca11AY.1000.000046
ORF1ab/nsp21A1SGcaTca11AY.1180.000063
ORF1ab/nsp21A1SGcaTca11AY.120.10.000321
ORF1ab/nsp21A1SGcaTca11AY.250.000006
ORF1ab/nsp21A1SGcaTca11AY.270.000065
ORF1ab/nsp21A1SGcaTca11AY.290.000016
ORF1ab/nsp21A1SGcaTca11AY.30.00001
ORF1ab/nsp21A1SGcaTca11AY.50.000021
ORF1ab/nsp21A1SGcaTca11AY.550.000917
ORF1ab/nsp21A1SGcaTca11AY.640.000595
ORF1ab/nsp21A1SGcaTca11AY.920.000287
ORF1ab/nsp21A1SGcaTca11AY.980.000079
ORF1ab/nsp21A1SGcaTca11B0.000128
ORF1ab/nsp21A1SGcaTca11B.10.000009
ORF1ab/nsp21A1SGcaTca11B.1.1.2610.008621
ORF1ab/nsp21A1SGcaTca11B.1.3690.000285
ORF1ab/nsp21A1SGcaTca11B.1.4270.00005
ORF1ab/nsp21A1SGcaTca11B.1.5600.00463
ORF1ab/nsp21A1SGcaTca11Q.10.000126