CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = A174V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2174A174VA354VnonsyngCcgTc152415010.9849081325-1327
ORF1ab/nsp2174A174VA354VnonsyngCCgTG1524200.01312341325-1327
ORF1ab/nsp2174A174VA354VnonsyngCCgTT152430.00196851325-1327

Details of the mutation A174V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2174A174VgCcgTc15011524All0.000287
ORF1ab/nsp2174A174VgCCgTG201524All0.000004
ORF1ab/nsp2174A174VgCCgTT31524All0.000001
ORF1ab/nsp2174A174VgCcgTc263266B.1.1.70.000235
ORF1ab/nsp2174A174VgCCgTG3266B.1.1.70.000003
ORF1ab/nsp2174A174VgCcgTc207207AY.40.000322
ORF1ab/nsp2174A174VgCcgTc143144AY.440.00087
ORF1ab/nsp2174A174VgCCgTG1144AY.440.000006
ORF1ab/nsp2174A174VgCcgTc137137B.1.617.20.000516
ORF1ab/nsp2174A174VgCcgTc113113B.1.5410.5
ORF1ab/nsp2174A174VgCcgTc6363AY.430.000279
ORF1ab/nsp2174A174VgCcgTc4554AY.250.000271
ORF1ab/nsp2174A174VgCCgTG954AY.250.000054
ORF1ab/nsp2174A174VgCcgTc5151B.1.1.4670.980769
ORF1ab/nsp2174A174VgCcgTc4850AY.30.000477
ORF1ab/nsp2174A174VgCCgTG150AY.30.00001
ORF1ab/nsp2174A174VgCCgTT150AY.30.00001
ORF1ab/nsp2174A174VgCcgTc4444B.1.360.00642
ORF1ab/nsp2174A174VgCcgTc3232AY.390.000791
ORF1ab/nsp2174A174VgCcgTc2222B.1.36.170.01087
ORF1ab/nsp2174A174VgCcgTc2121B.1.20.000185
ORF1ab/nsp2174A174VgCcgTc1618AY.1030.000099
ORF1ab/nsp2174A174VgCCgTG218AY.1030.000012
ORF1ab/nsp2174A174VgCcgTc1717B.1.10.000308
ORF1ab/nsp2174A174VgCcgTc1616B.10.000147
ORF1ab/nsp2174A174VgCcgTc1414B.1.1.5190.000556
ORF1ab/nsp2174A174VgCcgTc810AY.1000.000368
ORF1ab/nsp2174A174VgCCgTT110AY.1000.000046
ORF1ab/nsp2174A174VgCCgTG110AY.1000.000046
ORF1ab/nsp2174A174VgCcgTc1010B.1.1.2070.01182
ORF1ab/nsp2174A174VgCcgTc99AY.1020.000239
ORF1ab/nsp2174A174VgCcgTc99B.1.2580.000599
ORF1ab/nsp2174A174VgCcgTc88AY.290.000126
ORF1ab/nsp2174A174VgCcgTc88B.1.2210.000568
ORF1ab/nsp2174A174VgCcgTc78P.10.00011
ORF1ab/nsp2174A174VgCCgTG18P.10.000016
ORF1ab/nsp2174A174VgCcgTc46AY.260.000113
ORF1ab/nsp2174A174VgCCgTG26AY.260.000057
ORF1ab/nsp2174A174VgCcgTc66AY.330.000401
ORF1ab/nsp2174A174VgCcgTc66B.1.4290.000141
ORF1ab/nsp2174A174VgCcgTc55AY.1190.000177
ORF1ab/nsp2174A174VgCcgTc55AY.190.005701
ORF1ab/nsp2174A174VgCcgTc55AY.4.20.000108
ORF1ab/nsp2174A174VgCcgTc55AY.470.000156
ORF1ab/nsp2174A174VgCcgTc55AY.60.000206
ORF1ab/nsp2174A174VgCcgTc55B.1.1.2180.038462
ORF1ab/nsp2174A174VgCcgTc55B.1.1.280.001556
ORF1ab/nsp2174A174VgCcgTc55C.370.00058
ORF1ab/nsp2174A174VgCcgTc44AY.270.000259
ORF1ab/nsp2174A174VgCcgTc44AY.4.50.00043
ORF1ab/nsp2174A174VgCcgTc44AY.750.000224
ORF1ab/nsp2174A174VgCcgTc44B.1.4090.003125
ORF1ab/nsp2174A174VgCcgTc44B.1.6210.000354
ORF1ab/nsp2174A174VgCcgTc33A.10.000846
ORF1ab/nsp2174A174VgCcgTc33AY.1180.000188
ORF1ab/nsp2174A174VgCcgTc33AY.350.000699
ORF1ab/nsp2174A174VgCcgTc33AY.50.000062
ORF1ab/nsp2174A174VgCcgTc33AY.680.000821
ORF1ab/nsp2174A174VgCcgTc33AY.980.000237
ORF1ab/nsp2174A174VgCcgTc33B.1.177.460.002755
ORF1ab/nsp2174A174VgCcgTc22A.23.10.001408
ORF1ab/nsp2174A174VgCcgTc22AY.1200.000074
ORF1ab/nsp2174A174VgCcgTc22AY.120.10.000642
ORF1ab/nsp2174A174VgCcgTc22AY.160.000759
ORF1ab/nsp2174A174VgCcgTc22AY.230.000139
ORF1ab/nsp2174A174VgCcgTc22AY.320.001065
ORF1ab/nsp2174A174VgCcgTc22AY.450.000243
ORF1ab/nsp2174A174VgCcgTc22AY.46.40.000329
ORF1ab/nsp2174A174VgCcgTc22AY.540.000191
ORF1ab/nsp2174A174VgCcgTc22AY.880.001768
ORF1ab/nsp2174A174VgCcgTc22AY.910.001461
ORF1ab/nsp2174A174VgCcgTc22AY.98.10.000097
ORF1ab/nsp2174A174VgCcgTc22B.1.1.2160.001781
ORF1ab/nsp2174A174VgCcgTc22B.1.1.3160.00185
ORF1ab/nsp2174A174VgCcgTc22B.1.1.3180.000604
ORF1ab/nsp2174A174VgCcgTc22B.1.2340.000264
ORF1ab/nsp2174A174VgCcgTc22B.1.4270.000101
ORF1ab/nsp2174A174VgCcgTc22B.1.5250.000226
ORF1ab/nsp2174A174VgCcgTc22B.1.5260.000047
ORF1ab/nsp2174A174VgCcgTc22B.1.621.10.001012
ORF1ab/nsp2174A174VgCcgTc12B.1.6300.005236
ORF1ab/nsp2174A174VgCCgTT12B.1.6300.005236
ORF1ab/nsp2174A174VgCcgTc22P.1.140.000096
ORF1ab/nsp2174A174VgCcgTc22P.1.20.002312
ORF1ab/nsp2174A174VgCcgTc22Q.80.00033
ORF1ab/nsp2174A174VgCcgTc22R.10.00018
ORF1ab/nsp2174A174VgCcgTc11A.2.50.000499
ORF1ab/nsp2174A174VgCcgTc11AY.1040.001984
ORF1ab/nsp2174A174VgCcgTc11AY.1130.000142
ORF1ab/nsp2174A174VgCcgTc11AY.1140.000231
ORF1ab/nsp2174A174VgCcgTc11AY.1170.000085
ORF1ab/nsp2174A174VgCcgTc11AY.130.000161
ORF1ab/nsp2174A174VgCcgTc11AY.16.10.00047
ORF1ab/nsp2174A174VgCcgTc11AY.200.000039
ORF1ab/nsp2174A174VgCcgTc11AY.340.000097
ORF1ab/nsp2174A174VgCcgTc11AY.370.000316
ORF1ab/nsp2174A174VgCcgTc11AY.420.00004
ORF1ab/nsp2174A174VgCcgTc11AY.5.30.000337
ORF1ab/nsp2174A174VgCcgTc11AY.5.40.000277
ORF1ab/nsp2174A174VgCcgTc11AY.600.000938
ORF1ab/nsp2174A174VgCcgTc11AY.700.000209
ORF1ab/nsp2174A174VgCcgTc11AY.790.001211
ORF1ab/nsp2174A174VgCcgTc11AY.810.001992
ORF1ab/nsp2174A174VgCcgTc11AY.90.000068
ORF1ab/nsp2174A174VgCcgTc11B.1.1.1760.000439
ORF1ab/nsp2174A174VgCcgTc11B.1.1.3490.010309
ORF1ab/nsp2174A174VgCcgTc11B.1.110.30.000718
ORF1ab/nsp2174A174VgCcgTc11B.1.1770.000013
ORF1ab/nsp2174A174VgCcgTc11B.1.177.110.001698
ORF1ab/nsp2174A174VgCcgTc11B.1.177.170.000821
ORF1ab/nsp2174A174VgCcgTc11B.1.177.40.000211
ORF1ab/nsp2174A174VgCcgTc11B.1.177.580.001332
ORF1ab/nsp2174A174VgCcgTc11B.1.177.860.000183
ORF1ab/nsp2174A174VgCcgTc11B.1.214.30.007143
ORF1ab/nsp2174A174VgCcgTc11B.1.221.40.004167
ORF1ab/nsp2174A174VgCcgTc11B.1.3110.000275
ORF1ab/nsp2174A174VgCcgTc11B.1.3510.00003
ORF1ab/nsp2174A174VgCcgTc11B.1.4160.001269
ORF1ab/nsp2174A174VgCcgTc11B.1.4200.010417
ORF1ab/nsp2174A174VgCcgTc11B.1.4690.00361
ORF1ab/nsp2174A174VgCcgTc11B.1.5880.00091
ORF1ab/nsp2174A174VgCcgTc11B.1.5960.000087
ORF1ab/nsp2174A174VgCcgTc11B.1.617.10.000129
ORF1ab/nsp2174A174VgCcgTc11B.280.003279
ORF1ab/nsp2174A174VgCcgTc11C.36.30.000567
ORF1ab/nsp2174A174VgCcgTc11P.1.160.000374
ORF1ab/nsp2174A174VgCcgTc11P.1.170.000162
ORF1ab/nsp2174A174VgCcgTc11P.1.40.000977
ORF1ab/nsp2174A174VgCcgTc11P.20.000187
ORF1ab/nsp2174A174VgCcgTc11Q.10.000126