CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = A174A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2174A174AA354AsyngcCgcT139513380.959141325-1327
ORF1ab/nsp2174A174AA354AsyngcCgcA1395390.0279571325-1327
ORF1ab/nsp2174A174AA354AsyngcCgcG1395180.01290321325-1327

Details of the mutation A174A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2174A174AgcCgcT13381395All0.000256
ORF1ab/nsp2174A174AgcCgcA391395All0.000007
ORF1ab/nsp2174A174AgcCgcG181395All0.000003
ORF1ab/nsp2174A174AgcCgcT905905AY.430.00401
ORF1ab/nsp2174A174AgcCgcT5057B.1.1.70.000045
ORF1ab/nsp2174A174AgcCgcA457B.1.1.70.000004
ORF1ab/nsp2174A174AgcCgcG357B.1.1.70.000003
ORF1ab/nsp2174A174AgcCgcT3437B.10.000311
ORF1ab/nsp2174A174AgcCgcA337B.10.000027
ORF1ab/nsp2174A174AgcCgcT3033AY.40.000047
ORF1ab/nsp2174A174AgcCgcA333AY.40.000005
ORF1ab/nsp2174A174AgcCgcT2833B.1.617.20.000105
ORF1ab/nsp2174A174AgcCgcA533B.1.617.20.000019
ORF1ab/nsp2174A174AgcCgcT3232B.1.1.5190.001271
ORF1ab/nsp2174A174AgcCgcT1424AY.250.000084
ORF1ab/nsp2174A174AgcCgcG724AY.250.000042
ORF1ab/nsp2174A174AgcCgcA324AY.250.000018
ORF1ab/nsp2174A174AgcCgcT1317AY.1030.000081
ORF1ab/nsp2174A174AgcCgcA217AY.1030.000012
ORF1ab/nsp2174A174AgcCgcG217AY.1030.000012
ORF1ab/nsp2174A174AgcCgcT1016AY.1020.000265
ORF1ab/nsp2174A174AgcCgcA616AY.1020.000159
ORF1ab/nsp2174A174AgcCgcT1515AY.99.20.001382
ORF1ab/nsp2174A174AgcCgcT1515B.1.20.000132
ORF1ab/nsp2174A174AgcCgcT1414AY.4.10.010324
ORF1ab/nsp2174A174AgcCgcT1012AY.260.000283
ORF1ab/nsp2174A174AgcCgcG212AY.260.000057
ORF1ab/nsp2174A174AgcCgcT1111AY.290.000174
ORF1ab/nsp2174A174AgcCgcT1010B.1.2210.00071
ORF1ab/nsp2174A174AgcCgcT1010B.1.4290.000235
ORF1ab/nsp2174A174AgcCgcT88P.30.012759
ORF1ab/nsp2174A174AgcCgcT47AY.440.000024
ORF1ab/nsp2174A174AgcCgcA27AY.440.000012
ORF1ab/nsp2174A174AgcCgcG17AY.440.000006
ORF1ab/nsp2174A174AgcCgcT77B.1.10.000127
ORF1ab/nsp2174A174AgcCgcA36AY.390.000074
ORF1ab/nsp2174A174AgcCgcT36AY.390.000074
ORF1ab/nsp2174A174AgcCgcT66B.1.3960.004234
ORF1ab/nsp2174A174AgcCgcT55AY.39.10.000198
ORF1ab/nsp2174A174AgcCgcT55AY.540.000477
ORF1ab/nsp2174A174AgcCgcT45P.10.000063
ORF1ab/nsp2174A174AgcCgcG15P.10.000016
ORF1ab/nsp2174A174AgcCgcT44AY.750.000224
ORF1ab/nsp2174A174AgcCgcT44B.1.2340.000528
ORF1ab/nsp2174A174AgcCgcT44B.1.4270.000202
ORF1ab/nsp2174A174AgcCgcT33AY.1130.000427
ORF1ab/nsp2174A174AgcCgcT33AY.200.000117
ORF1ab/nsp2174A174AgcCgcT23AY.30.00002
ORF1ab/nsp2174A174AgcCgcG13AY.30.00001
ORF1ab/nsp2174A174AgcCgcT33AY.4.20.000065
ORF1ab/nsp2174A174AgcCgcT23B.1.5260.000047
ORF1ab/nsp2174A174AgcCgcG13B.1.5260.000024
ORF1ab/nsp2174A174AgcCgcT220.111111
ORF1ab/nsp2174A174AgcCgcT22AY.1000.000092
ORF1ab/nsp2174A174AgcCgcA12AY.1190.000035
ORF1ab/nsp2174A174AgcCgcT12AY.1190.000035
ORF1ab/nsp2174A174AgcCgcT22AY.3.10.000171
ORF1ab/nsp2174A174AgcCgcT22AY.350.000466
ORF1ab/nsp2174A174AgcCgcT22AY.470.000062
ORF1ab/nsp2174A174AgcCgcT22AY.670.000929
ORF1ab/nsp2174A174AgcCgcT22AY.98.10.000097
ORF1ab/nsp2174A174AgcCgcT22B.1.1600.000062
ORF1ab/nsp2174A174AgcCgcT22B.1.1640.029851
ORF1ab/nsp2174A174AgcCgcT22B.1.351.20.000605
ORF1ab/nsp2174A174AgcCgcT22B.1.3690.00057
ORF1ab/nsp2174A174AgcCgcT22B.1.6090.000959
ORF1ab/nsp2174A174AgcCgcT22B.1.6210.000177
ORF1ab/nsp2174A174AgcCgcA11AY.100.00053
ORF1ab/nsp2174A174AgcCgcT11AY.1100.000113
ORF1ab/nsp2174A174AgcCgcA11AY.160.00038
ORF1ab/nsp2174A174AgcCgcT11AY.16.10.00047
ORF1ab/nsp2174A174AgcCgcT11AY.20.000356
ORF1ab/nsp2174A174AgcCgcT11AY.240.000431
ORF1ab/nsp2174A174AgcCgcT11AY.270.000065
ORF1ab/nsp2174A174AgcCgcT11AY.300.000396
ORF1ab/nsp2174A174AgcCgcT11AY.330.000067
ORF1ab/nsp2174A174AgcCgcA11AY.360.000148
ORF1ab/nsp2174A174AgcCgcT11AY.4.40.000409
ORF1ab/nsp2174A174AgcCgcT11AY.460.000104
ORF1ab/nsp2174A174AgcCgcT11AY.46.40.000165
ORF1ab/nsp2174A174AgcCgcT11AY.46.50.000198
ORF1ab/nsp2174A174AgcCgcT11AY.480.000465
ORF1ab/nsp2174A174AgcCgcT11AY.50.000021
ORF1ab/nsp2174A174AgcCgcT11AY.610.000105
ORF1ab/nsp2174A174AgcCgcT11AY.650.000533
ORF1ab/nsp2174A174AgcCgcT11AY.720.001361
ORF1ab/nsp2174A174AgcCgcT11AY.730.000665
ORF1ab/nsp2174A174AgcCgcT11AY.740.000116
ORF1ab/nsp2174A174AgcCgcT11AY.780.001541
ORF1ab/nsp2174A174AgcCgcT11AY.880.000884
ORF1ab/nsp2174A174AgcCgcA11AY.9.20.000037
ORF1ab/nsp2174A174AgcCgcT11AY.930.000273
ORF1ab/nsp2174A174AgcCgcA11B0.000128
ORF1ab/nsp2174A174AgcCgcA11B.1.1.2140.000055
ORF1ab/nsp2174A174AgcCgcT11B.1.1.2550.00303
ORF1ab/nsp2174A174AgcCgcT11B.1.1.3170.000412
ORF1ab/nsp2174A174AgcCgcT11B.1.1.3480.000796
ORF1ab/nsp2174A174AgcCgcT11B.1.1.5250.005464
ORF1ab/nsp2174A174AgcCgcT11B.1.1.610.008772
ORF1ab/nsp2174A174AgcCgcT11B.1.177.750.001041
ORF1ab/nsp2174A174AgcCgcT11B.1.2430.00007
ORF1ab/nsp2174A174AgcCgcT11B.1.2580.000067
ORF1ab/nsp2174A174AgcCgcA11B.1.3460.001311
ORF1ab/nsp2174A174AgcCgcT11B.1.3510.00003
ORF1ab/nsp2174A174AgcCgcT11B.1.360.000146
ORF1ab/nsp2174A174AgcCgcT11B.1.4200.010417
ORF1ab/nsp2174A174AgcCgcT11B.1.466.20.000391
ORF1ab/nsp2174A174AgcCgcT11B.1.5760.000907
ORF1ab/nsp2174A174AgcCgcT11B.1.5960.000087
ORF1ab/nsp2174A174AgcCgcT11B.1.617.10.000129
ORF1ab/nsp2174A174AgcCgcT11B.1.6280.000352
ORF1ab/nsp2174A174AgcCgcT11B.1.6300.005236
ORF1ab/nsp2174A174AgcCgcT11B.1.6330.041667
ORF1ab/nsp2174A174AgcCgcT11P.1.10.000318
ORF1ab/nsp2174A174AgcCgcT11P.1.120.000484
ORF1ab/nsp2174A174AgcCgcT11P.1.170.000162
ORF1ab/nsp2174A174AgcCgcT11R.10.00009