CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 99 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp299S99delS279deldelTCC---828211100-1102

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp299S99delTCC---8282All0.000016
ORF1ab/nsp299S99delTCC---1717B.1.1.70.000015
ORF1ab/nsp299S99delTCC---66AY.250.000036
ORF1ab/nsp299S99delTCC---66B.1.617.20.000023
ORF1ab/nsp299S99delTCC---55B.1.1.330.002104
ORF1ab/nsp299S99delTCC---44AY.40.000006
ORF1ab/nsp299S99delTCC---44AY.430.000018
ORF1ab/nsp299S99delTCC---44B.1.1.3480.003185
ORF1ab/nsp299S99delTCC---22AY.1030.000012
ORF1ab/nsp299S99delTCC---22AY.4.50.000215
ORF1ab/nsp299S99delTCC---22B.1.4290.000047
ORF1ab/nsp299S99delTCC---22N.60.014184
ORF1ab/nsp299S99delTCC---22P.20.000373
ORF1ab/nsp299S99delTCC---11AY.260.000028
ORF1ab/nsp299S99delTCC---11AY.440.000006
ORF1ab/nsp299S99delTCC---11AY.5.30.000337
ORF1ab/nsp299S99delTCC---11AY.620.000436
ORF1ab/nsp299S99delTCC---11AY.840.000437
ORF1ab/nsp299S99delTCC---11AY.990.001049
ORF1ab/nsp299S99delTCC---11B.10.000009
ORF1ab/nsp299S99delTCC---11B.1.10.000018
ORF1ab/nsp299S99delTCC---11B.1.1.700.000341
ORF1ab/nsp299S99delTCC---11B.1.1770.000013
ORF1ab/nsp299S99delTCC---11B.1.177.40.000211
ORF1ab/nsp299S99delTCC---11B.1.177.540.000606
ORF1ab/nsp299S99delTCC---11B.1.177.70.000165
ORF1ab/nsp299S99delTCC---11B.1.177.870.000728
ORF1ab/nsp299S99delTCC---11B.1.177.90.001332
ORF1ab/nsp299S99delTCC---11B.1.20.000009
ORF1ab/nsp299S99delTCC---11B.1.230.006061
ORF1ab/nsp299S99delTCC---11B.1.258.100.011364
ORF1ab/nsp299S99delTCC---11B.1.5960.000087
ORF1ab/nsp299S99delTCC---11B.1.617.30.002985
ORF1ab/nsp299S99delTCC---11B.1.6210.000089
ORF1ab/nsp299S99delTCC---11B.340.013699
ORF1ab/nsp299S99delTCC---11N.40.004255
ORF1ab/nsp299S99delTCC---11P.1.10.000318
ORF1ab/nsp299S99delTCC---11Q.10.000126
ORF1ab/nsp299S99delTCC---11Q.20.000613