CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 91 & Codon = cTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp291P91LP271LnonsyncCacTa529852950.9994341076-1078

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp291P91LcCacTa52955298All0.001013
ORF1ab/nsp291P91LcCacTa25172517AY.40.003918
ORF1ab/nsp291P91LcCacTa632632B.1.1.70.000566
ORF1ab/nsp291P91LcCacTa463463P.1.160.173214
ORF1ab/nsp291P91LcCacTa306306P.60.962264
ORF1ab/nsp291P91LcCacTa242242B.1.617.20.000911
ORF1ab/nsp291P91LcCacTa129129AY.340.012508
ORF1ab/nsp291P91LcCacTa8484AY.1020.002227
ORF1ab/nsp291P91LcCacTa8181AY.440.000493
ORF1ab/nsp291P91LcCacTa6464AY.30.000637
ORF1ab/nsp291P91LcCacTa6464P.10.001008
ORF1ab/nsp291P91LcCacTa5354AY.430.000235
ORF1ab/nsp291P91LcCacTa3838AY.1030.000236
ORF1ab/nsp291P91LcCacTa3535AY.390.000865
ORF1ab/nsp291P91LcCacTa3131B.1.1.1150.276786
ORF1ab/nsp291P91LcCacTa2929B.1.1.280.009026
ORF1ab/nsp291P91LcCacTa2626AY.260.000736
ORF1ab/nsp291P91LcCacTa2626AY.46.60.001877
ORF1ab/nsp291P91LcCacTa2424AY.610.002515
ORF1ab/nsp291P91LcCacTa2424B.1.258.170.002495
ORF1ab/nsp291P91LcCacTa2222B.10.000202
ORF1ab/nsp291P91LcCacTa2121B.1.2340.002771
ORF1ab/nsp291P91LcCacTa2020B.1.10.000363
ORF1ab/nsp291P91LcCacTa1717AY.420.000684
ORF1ab/nsp291P91LcCacTa1717B.1.5260.0004
ORF1ab/nsp291P91LcCacTa1616AY.250.000096
ORF1ab/nsp291P91LcCacTa1111B.1.1.3170.004529
ORF1ab/nsp291P91LcCacTa99B.1.177.810.001704
ORF1ab/nsp291P91LcCacTa99B.1.4290.000212
ORF1ab/nsp291P91LcCacTa88AY.460.000833
ORF1ab/nsp291P91LcCacTa88B.1.1.5250.043716
ORF1ab/nsp291P91LcCacTa88B.1.1770.000105
ORF1ab/nsp291P91LcCacTa77B.1.1.330.002946
ORF1ab/nsp291P91LcCacTa77B.1.20.000062
ORF1ab/nsp291P91LcCacTa77B.1.2580.000466
ORF1ab/nsp291P91LcCacTa66AY.1130.000854
ORF1ab/nsp291P91LcCacTa66B.1.1.2220.001224
ORF1ab/nsp291P91LcCacTa66B.1.177.120.00091
ORF1ab/nsp291P91LcCacTa66B.1.6210.000531
ORF1ab/nsp291P91LcCacTa66P.1.140.000287
ORF1ab/nsp291P91LcCacTa66P.1.170.000971
ORF1ab/nsp291P91LcCacTa55A0.001935
ORF1ab/nsp291P91LcCacTa55AY.39.10.000198
ORF1ab/nsp291P91LcCacTa55AY.98.10.000242
ORF1ab/nsp291P91LcCacTa55B.1.1.5190.000199
ORF1ab/nsp291P91LcCacTa55B.1.177.600.001092
ORF1ab/nsp291P91LcCacTa55B.1.36.290.002587
ORF1ab/nsp291P91LcCacTa44A.20.002647
ORF1ab/nsp291P91LcCacTa44AY.200.000155
ORF1ab/nsp291P91LcCacTa44AY.50.000083
ORF1ab/nsp291P91LcCacTa44AY.750.000224
ORF1ab/nsp291P91LcCacTa44B.1.2430.000278
ORF1ab/nsp291P91LcCacTa44B.1.360.000584
ORF1ab/nsp291P91LcCacTa44C.140.017316
ORF1ab/nsp291P91LcCacTa44Q.30.00058
ORF1ab/nsp291P91LcCacTa33AY.1000.000138
ORF1ab/nsp291P91LcCacTa33AY.1170.000254
ORF1ab/nsp291P91LcCacTa33AY.380.001498
ORF1ab/nsp291P91LcCacTa33AY.470.000093
ORF1ab/nsp291P91LcCacTa33AY.5.30.001012
ORF1ab/nsp291P91LcCacTa33AY.9.20.00011
ORF1ab/nsp291P91LcCacTa33AY.930.000819
ORF1ab/nsp291P91LcCacTa33B.1.1.2140.000166
ORF1ab/nsp291P91LcCacTa33B.1.1.270.016949
ORF1ab/nsp291P91LcCacTa33B.1.2210.000213
ORF1ab/nsp291P91LcCacTa33B.1.4270.000151
ORF1ab/nsp291P91LcCacTa33C.370.000348
ORF1ab/nsp291P91LcCacTa22AY.1180.000125
ORF1ab/nsp291P91LcCacTa22AY.1190.000071
ORF1ab/nsp291P91LcCacTa22AY.20.000712
ORF1ab/nsp291P91LcCacTa22AY.230.000139
ORF1ab/nsp291P91LcCacTa22AY.300.000791
ORF1ab/nsp291P91LcCacTa22AY.4.20.000043
ORF1ab/nsp291P91LcCacTa22AY.560.00321
ORF1ab/nsp291P91LcCacTa22AY.690.000373
ORF1ab/nsp291P91LcCacTa22AY.70.000392
ORF1ab/nsp291P91LcCacTa22AY.740.000231
ORF1ab/nsp291P91LcCacTa22AY.840.000875
ORF1ab/nsp291P91LcCacTa22AY.880.001768
ORF1ab/nsp291P91LcCacTa22B.1.1310.017544
ORF1ab/nsp291P91LcCacTa22B.1.177.100.001756
ORF1ab/nsp291P91LcCacTa22B.1.3560.003454
ORF1ab/nsp291P91LcCacTa22B.1.3960.001411
ORF1ab/nsp291P91LcCacTa22B.1.4590.008163
ORF1ab/nsp291P91LcCacTa22B.1.617.10.000258
ORF1ab/nsp291P91LcCacTa22P.1.70.000639
ORF1ab/nsp291P91LcCacTa22Q.40.00091
ORF1ab/nsp291P91LcCacTa11A.190.009434
ORF1ab/nsp291P91LcCacTa11AH.30.003802
ORF1ab/nsp291P91LcCacTa11AY.100.00053
ORF1ab/nsp291P91LcCacTa11AY.1140.000231
ORF1ab/nsp291P91LcCacTa11AY.1200.000037
ORF1ab/nsp291P91LcCacTa11AY.120.10.000321
ORF1ab/nsp291P91LcCacTa11AY.1210.000135
ORF1ab/nsp291P91LcCacTa11AY.160.00038
ORF1ab/nsp291P91LcCacTa11AY.270.000065
ORF1ab/nsp291P91LcCacTa11AY.3.10.000085
ORF1ab/nsp291P91LcCacTa11AY.330.000067
ORF1ab/nsp291P91LcCacTa11AY.350.000233
ORF1ab/nsp291P91LcCacTa11AY.4.50.000107
ORF1ab/nsp291P91LcCacTa11AY.480.000465
ORF1ab/nsp291P91LcCacTa11AY.5.40.000277
ORF1ab/nsp291P91LcCacTa11AY.520.000814
ORF1ab/nsp291P91LcCacTa11AY.590.00053
ORF1ab/nsp291P91LcCacTa11AY.60.000041
ORF1ab/nsp291P91LcCacTa11AY.600.000938
ORF1ab/nsp291P91LcCacTa11AY.700.000209
ORF1ab/nsp291P91LcCacTa11AY.75.10.00018
ORF1ab/nsp291P91LcCacTa11AY.890.004902
ORF1ab/nsp291P91LcCacTa11AY.90.000068
ORF1ab/nsp291P91LcCacTa11AY.920.000287
ORF1ab/nsp291P91LcCacTa11AY.980.000079
ORF1ab/nsp291P91LcCacTa11B.1.1.2360.006897
ORF1ab/nsp291P91LcCacTa11B.1.1.2840.000107
ORF1ab/nsp291P91LcCacTa11B.1.1.3260.001761
ORF1ab/nsp291P91LcCacTa11B.1.1.3690.000446
ORF1ab/nsp291P91LcCacTa11B.1.1.4090.002833
ORF1ab/nsp291P91LcCacTa11B.1.1.4480.002033
ORF1ab/nsp291P91LcCacTa11B.1.1.4640.001473
ORF1ab/nsp291P91LcCacTa11B.1.1.4840.1
ORF1ab/nsp291P91LcCacTa11B.1.1.5180.006329
ORF1ab/nsp291P91LcCacTa11B.1.1110.001175
ORF1ab/nsp291P91LcCacTa11B.1.1470.000756
ORF1ab/nsp291P91LcCacTa11B.1.1570.002985
ORF1ab/nsp291P91LcCacTa11B.1.1600.000031
ORF1ab/nsp291P91LcCacTa11B.1.160.280.002924
ORF1ab/nsp291P91LcCacTa11B.1.177.210.000076
ORF1ab/nsp291P91LcCacTa11B.1.177.230.003236
ORF1ab/nsp291P91LcCacTa11B.1.177.40.000211
ORF1ab/nsp291P91LcCacTa11B.1.177.440.000519
ORF1ab/nsp291P91LcCacTa11B.1.177.770.000726
ORF1ab/nsp291P91LcCacTa11B.1.177.820.000477
ORF1ab/nsp291P91LcCacTa11B.1.2320.000537
ORF1ab/nsp291P91LcCacTa11B.1.3110.000275
ORF1ab/nsp291P91LcCacTa11B.1.3260.007576
ORF1ab/nsp291P91LcCacTa11B.1.3510.00003
ORF1ab/nsp291P91LcCacTa11B.1.36.80.001
ORF1ab/nsp291P91LcCacTa11B.1.4260.001009
ORF1ab/nsp291P91LcCacTa11B.1.466.20.000391
ORF1ab/nsp291P91LcCacTa11B.1.5950.000261
ORF1ab/nsp291P91LcCacTa11B.1.5970.00463
ORF1ab/nsp291P91LcCacTa11B.1.5990.00365
ORF1ab/nsp291P91LcCacTa11B.1.6050.005952
ORF1ab/nsp291P91LcCacTa11B.1.6230.000536
ORF1ab/nsp291P91LcCacTa11B.1.6360.006711
ORF1ab/nsp291P91LcCacTa11B.1.6370.000073
ORF1ab/nsp291P91LcCacTa11C.10.002392
ORF1ab/nsp291P91LcCacTa11C.350.000774
ORF1ab/nsp291P91LcCacTa11D.20.000075
ORF1ab/nsp291P91LcCacTa11N.30.005814
ORF1ab/nsp291P91LcCacTa11N.50.001767
ORF1ab/nsp291P91LcCacTa11P.1.150.000232
ORF1ab/nsp291P91LcCacTa11Q.10.000126