CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 91

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp291P91LP271LnonsyncCacTa529852950.9994341076-1078
ORF1ab/nsp291P91LP271LnonsyncCAcTG529820.0003775011076-1078
ORF1ab/nsp291P91LP271LnonsynCCaTTa529810.000188751076-1078
ORF1ab/nsp291P91SP271SnonsynCcaTca1559155911076-1078
ORF1ab/nsp291P91PP271PsynccAccG3022750.9105961076-1078
ORF1ab/nsp291P91PP271PsynccAccC302160.05298011076-1078
ORF1ab/nsp291P91PP271PsynccAccT302110.03642381076-1078
ORF1ab/nsp291P91QP271QnonsyncCacAa19019011076-1078
ORF1ab/nsp291P91delP271deldelCCA---626211076-1078
ORF1ab/nsp291P91TP271TnonsynCcaAca303011076-1078
ORF1ab/nsp291P91RP271RnonsyncCacGa23220.9565221076-1078
ORF1ab/nsp291P91RP271RnonsyncCAcGT2310.04347831076-1078
ORF1ab/nsp291P91del1P271del1delccAcc-19170.8947371076-1078
ORF1ab/nsp291P91del1P271del1delCca-ca1920.1052631076-1078
ORF1ab/nsp291P91AP271AnonsynCcaGca3311076-1078
ORF1ab/nsp291P91GP271GnonsynCCaGGa2211076-1078
ORF1ab/nsp291P91KP271KnonsynCCaAAa1111076-1078
ORF1ab/nsp291P91VP271VnonsynCCaGTa1111076-1078

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp291P91LcCacTa52955298All0.001013
ORF1ab/nsp291P91LcCAcTG25298All0
ORF1ab/nsp291P91LCCaTTa15298All0
ORF1ab/nsp291P91LcCacTa25172517AY.40.003918
ORF1ab/nsp291P91SCcaTca15591559All0.000298
ORF1ab/nsp291P91LcCacTa632632B.1.1.70.000566
ORF1ab/nsp291P91LcCacTa463463P.1.160.173214
ORF1ab/nsp291P91SCcaTca344344B.1.1.70.000308
ORF1ab/nsp291P91LcCacTa306306P.60.962264
ORF1ab/nsp291P91PccAccG275302All0.000053
ORF1ab/nsp291P91PccAccC16302All0.000003
ORF1ab/nsp291P91PccAccT11302All0.000002
ORF1ab/nsp291P91LcCacTa242242B.1.617.20.000911
ORF1ab/nsp291P91QcCacAa190190All0.000036
ORF1ab/nsp291P91LcCacTa129129AY.340.012508
ORF1ab/nsp291P91SCcaTca118118AY.40.000184
ORF1ab/nsp291P91LcCacTa8484AY.1020.002227
ORF1ab/nsp291P91SCcaTca8484B.4.51
ORF1ab/nsp291P91SCcaTca8181AY.250.000487
ORF1ab/nsp291P91LcCacTa8181AY.440.000493
ORF1ab/nsp291P91PccAccG6669P.10.00104
ORF1ab/nsp291P91PccAccC369P.10.000047
ORF1ab/nsp291P91LcCacTa6464AY.30.000637
ORF1ab/nsp291P91LcCacTa6464P.10.001008
ORF1ab/nsp291P91delCCA---6262All0.000012
ORF1ab/nsp291P91SCcaTca6161B.1.258.170.006342
ORF1ab/nsp291P91SCcaTca5858AY.290.000915
ORF1ab/nsp291P91PccAccG5455AY.250.000325
ORF1ab/nsp291P91PccAccT155AY.250.000006
ORF1ab/nsp291P91LcCacTa5354AY.430.000235
ORF1ab/nsp291P91LCCaTTa154AY.430.000004
ORF1ab/nsp291P91SCcaTca5151B.1.401
ORF1ab/nsp291P91SCcaTca4949AY.1030.000304
ORF1ab/nsp291P91SCcaTca4747B.1.6090.022531
ORF1ab/nsp291P91PccAccG4143B.1.1770.00054
ORF1ab/nsp291P91PccAccC243B.1.1770.000026
ORF1ab/nsp291P91LcCacTa3838AY.1030.000236
ORF1ab/nsp291P91SCcaTca3737B.1.617.20.000139
ORF1ab/nsp291P91QcCacAa3636B.1.1.70.000032
ORF1ab/nsp291P91LcCacTa3535AY.390.000865
ORF1ab/nsp291P91PccAccG3033B.1.1.70.000027
ORF1ab/nsp291P91PccAccT233B.1.1.70.000002
ORF1ab/nsp291P91PccAccC133B.1.1.70.000001
ORF1ab/nsp291P91SCcaTca3232B.1.20.000282
ORF1ab/nsp291P91LcCacTa3131B.1.1.1150.276786
ORF1ab/nsp291P91SCcaTca3131P.10.000488
ORF1ab/nsp291P91TCcaAca3030All0.000006
ORF1ab/nsp291P91LcCacTa2929B.1.1.280.009026
ORF1ab/nsp291P91SCcaTca2929Q.30.004206
ORF1ab/nsp291P91SCcaTca2828B.1.177.200.042489
ORF1ab/nsp291P91LcCacTa2626AY.260.000736
ORF1ab/nsp291P91PccAccG2626AY.40.00004
ORF1ab/nsp291P91LcCacTa2626AY.46.60.001877
ORF1ab/nsp291P91SCcaTca2525AY.30.000249
ORF1ab/nsp291P91LcCacTa2424AY.610.002515
ORF1ab/nsp291P91LcCacTa2424B.1.258.170.002495
ORF1ab/nsp291P91RcCacGa2223All0.000004
ORF1ab/nsp291P91RcCAcGT123All0
ORF1ab/nsp291P91LcCacTa2222B.10.000202
ORF1ab/nsp291P91SCcaTca2222B.1.2580.001464
ORF1ab/nsp291P91LcCacTa2121B.1.2340.002771
ORF1ab/nsp291P91LcCacTa2020B.1.10.000363
ORF1ab/nsp291P91SCcaTca2020B.1.160.310.16129
ORF1ab/nsp291P91del1ccAcc-1719All0.000003
ORF1ab/nsp291P91del1Cca-ca219All0
ORF1ab/nsp291P91QcCacAa1919AY.430.000084
ORF1ab/nsp291P91SCcaTca1818AY.4.20.00039
ORF1ab/nsp291P91SCcaTca1818B.1.10.000327
ORF1ab/nsp291P91SCcaTca1818B.1.1.5190.000715
ORF1ab/nsp291P91SCcaTca1818B.1.177.70.002967
ORF1ab/nsp291P91LcCacTa1717AY.420.000684
ORF1ab/nsp291P91delCCA---1717B.1.1.70.000015
ORF1ab/nsp291P91LcCacTa1717B.1.5260.0004
ORF1ab/nsp291P91LcCacTa1616AY.250.000096
ORF1ab/nsp291P91SCcaTca1616AY.50.00033
ORF1ab/nsp291P91SCcaTca1515AY.430.000066
ORF1ab/nsp291P91SCcaTca1515B.10.000137
ORF1ab/nsp291P91QcCacAa1515B.1.617.20.000056
ORF1ab/nsp291P91SCcaTca1414AY.200.000544
ORF1ab/nsp291P91QcCacAa1414AY.40.000022
ORF1ab/nsp291P91SCcaTca1414AY.440.000085
ORF1ab/nsp291P91SCcaTca1414B.1.177.330.023026
ORF1ab/nsp291P91PccAccG1212AY.440.000073
ORF1ab/nsp291P91SCcaTca1212B.1.1.1890.018154
ORF1ab/nsp291P91QcCacAa1111AY.1030.000068
ORF1ab/nsp291P91LcCacTa1111B.1.1.3170.004529
ORF1ab/nsp291P91SCcaTca1010B.1.1770.000132
ORF1ab/nsp291P91PccAccG810B.1.617.20.00003
ORF1ab/nsp291P91PccAccC210B.1.617.20.000008
ORF1ab/nsp291P91SCcaTca1010N.50.017668
ORF1ab/nsp291P91RcCacGa99B.1.1.70.000008
ORF1ab/nsp291P91LcCacTa99B.1.177.810.001704
ORF1ab/nsp291P91LcCacTa99B.1.4290.000212
ORF1ab/nsp291P91LcCacTa88AY.460.000833
ORF1ab/nsp291P91SCcaTca88B.1.1.2840.000859
ORF1ab/nsp291P91LcCacTa88B.1.1.5250.043716
ORF1ab/nsp291P91SCcaTca88B.1.1600.00025
ORF1ab/nsp291P91LcCacTa88B.1.1770.000105
ORF1ab/nsp291P91RcCacGa88B.1.5250.000905
ORF1ab/nsp291P91QcCacAa88B.1.5260.000188
ORF1ab/nsp291P91SCcaTca77AY.1180.000439
ORF1ab/nsp291P91PccAccG77AY.290.00011
ORF1ab/nsp291P91SCcaTca77AY.46.60.000505
ORF1ab/nsp291P91SCcaTca77AY.60.000288
ORF1ab/nsp291P91SCcaTca77B.1.1.2790.007848
ORF1ab/nsp291P91LcCacTa77B.1.1.330.002946
ORF1ab/nsp291P91LcCacTa77B.1.20.000062
ORF1ab/nsp291P91LcCacTa77B.1.2580.000466
ORF1ab/nsp291P91SCcaTca77B.1.5750.002124
ORF1ab/nsp291P91PccAccG77B.1.6370.000512
ORF1ab/nsp291P91LcCacTa66AY.1130.000854
ORF1ab/nsp291P91QcCacAa66AY.610.000629
ORF1ab/nsp291P91LcCacTa66B.1.1.2220.001224
ORF1ab/nsp291P91LcCacTa66B.1.177.120.00091
ORF1ab/nsp291P91SCcaTca66B.1.2410.00487
ORF1ab/nsp291P91LcCacTa66B.1.6210.000531
ORF1ab/nsp291P91SCcaTca66B.1.6210.000531
ORF1ab/nsp291P91LcCacTa66P.1.140.000287
ORF1ab/nsp291P91LcCacTa66P.1.170.000971
ORF1ab/nsp291P91LcCacTa55A0.001935
ORF1ab/nsp291P91SCcaTca55A.2.20.008446
ORF1ab/nsp291P91QcCacAa55AY.1020.000133
ORF1ab/nsp291P91SCcaTca55AY.3.10.000426
ORF1ab/nsp291P91LcCacTa55AY.39.10.000198
ORF1ab/nsp291P91SCcaTca55AY.470.000156
ORF1ab/nsp291P91LcCacTa55AY.98.10.000242
ORF1ab/nsp291P91QcCacAa55AY.99.20.000461
ORF1ab/nsp291P91delCCA---55B.1.1.330.002104
ORF1ab/nsp291P91LcCacTa55B.1.1.5190.000199
ORF1ab/nsp291P91LcCacTa55B.1.177.600.001092
ORF1ab/nsp291P91SCcaTca55B.1.36.290.002587
ORF1ab/nsp291P91LcCacTa55B.1.36.290.002587
ORF1ab/nsp291P91delCCA---55B.1.617.20.000019
ORF1ab/nsp291P91SCcaTca55B.1.6280.001762
ORF1ab/nsp291P91LcCacTa44A.20.002647
ORF1ab/nsp291P91PccAccG44AY.1020.000106
ORF1ab/nsp291P91SCcaTca44AY.1190.000141
ORF1ab/nsp291P91LcCacTa44AY.200.000155
ORF1ab/nsp291P91QcCacAa44AY.230.000279
ORF1ab/nsp291P91SCcaTca44AY.260.000113
ORF1ab/nsp291P91TCcaAca44AY.30.00004
ORF1ab/nsp291P91QcCacAa44AY.30.00004
ORF1ab/nsp291P91SCcaTca44AY.330.000267
ORF1ab/nsp291P91PccAccG44AY.430.000018
ORF1ab/nsp291P91QcCacAa44AY.440.000024
ORF1ab/nsp291P91LcCacTa44AY.50.000083
ORF1ab/nsp291P91QcCacAa44AY.50.000083
ORF1ab/nsp291P91LcCacTa44AY.750.000224
ORF1ab/nsp291P91SCcaTca44AY.98.10.000194
ORF1ab/nsp291P91TCcaAca44B.10.000037
ORF1ab/nsp291P91SCcaTca44B.1.1.1480.035088
ORF1ab/nsp291P91delCCA---44B.1.1.3480.003185
ORF1ab/nsp291P91del1ccAcc-44B.1.1.70.000004
ORF1ab/nsp291P91SCcaTca44B.1.177.320.005398
ORF1ab/nsp291P91QcCacAa44B.1.20.000035
ORF1ab/nsp291P91LcCacTa44B.1.2430.000278
ORF1ab/nsp291P91LcCacTa44B.1.360.000584
ORF1ab/nsp291P91SCcaTca44B.1.4290.000094
ORF1ab/nsp291P91SCcaTca44B.1.5260.000094
ORF1ab/nsp291P91LcCacTa44C.140.017316
ORF1ab/nsp291P91LcCacTa44Q.30.00058
ORF1ab/nsp291P91ACcaGca33All0.000001
ORF1ab/nsp291P91LcCacTa33AY.1000.000138
ORF1ab/nsp291P91SCcaTca33AY.1020.00008
ORF1ab/nsp291P91SCcaTca33AY.1070.001398
ORF1ab/nsp291P91LcCacTa33AY.1170.000254
ORF1ab/nsp291P91del1ccAcc-33AY.250.000018
ORF1ab/nsp291P91QcCacAa33AY.250.000018
ORF1ab/nsp291P91LcCacTa33AY.380.001498
ORF1ab/nsp291P91SCcaTca33AY.390.000074
ORF1ab/nsp291P91SCcaTca33AY.420.000121
ORF1ab/nsp291P91TCcaAca33AY.430.000013
ORF1ab/nsp291P91PccAccG33AY.450.000365
ORF1ab/nsp291P91LcCacTa33AY.470.000093
ORF1ab/nsp291P91LcCacTa33AY.5.30.001012
ORF1ab/nsp291P91SCcaTca33AY.90.000203
ORF1ab/nsp291P91LcCacTa33AY.9.20.00011
ORF1ab/nsp291P91LcCacTa33AY.930.000819
ORF1ab/nsp291P91QcCacAa33B.10.000027
ORF1ab/nsp291P91LcCacTa33B.1.1.2140.000166
ORF1ab/nsp291P91LcCacTa33B.1.1.270.016949
ORF1ab/nsp291P91SCcaTca33B.1.1.4320.003797
ORF1ab/nsp291P91SCcaTca33B.1.1.460.0131
ORF1ab/nsp291P91TCcaAca33B.1.1.70.000003
ORF1ab/nsp291P91LcCacTa33B.1.2210.000213
ORF1ab/nsp291P91SCcaTca33B.1.2210.000213
ORF1ab/nsp291P91SCcaTca33B.1.2430.000209
ORF1ab/nsp291P91QcCacAa33B.1.3060.017143
ORF1ab/nsp291P91SCcaTca33B.1.3960.002117
ORF1ab/nsp291P91LcCacTa33B.1.4270.000151
ORF1ab/nsp291P91SCcaTca33B.1.617.10.000387
ORF1ab/nsp291P91LcCacTa33C.370.000348
ORF1ab/nsp291P91QcCacAa33P.10.000047
ORF1ab/nsp291P91QcCacAa33Q.40.001364
ORF1ab/nsp291P91TCcaAca220.111111
ORF1ab/nsp291P91del1ccAcc-220.111111
ORF1ab/nsp291P91RcCacGa220.111111
ORF1ab/nsp291P91LcCAcTG220.111111
ORF1ab/nsp291P91GCCaGGa22All0
ORF1ab/nsp291P91SCcaTca22AY.1000.000092
ORF1ab/nsp291P91PccAccC22AY.1070.000932
ORF1ab/nsp291P91QcCacAa22AY.1080.002205
ORF1ab/nsp291P91SCcaTca22AY.1110.000366
ORF1ab/nsp291P91LcCacTa22AY.1180.000125
ORF1ab/nsp291P91LcCacTa22AY.1190.000071
ORF1ab/nsp291P91SCcaTca22AY.140.000176
ORF1ab/nsp291P91LcCacTa22AY.20.000712
ORF1ab/nsp291P91QcCacAa22AY.200.000078
ORF1ab/nsp291P91SCcaTca22AY.230.000139
ORF1ab/nsp291P91LcCacTa22AY.230.000139
ORF1ab/nsp291P91LcCacTa22AY.300.000791
ORF1ab/nsp291P91delCCA---22AY.40.000003
ORF1ab/nsp291P91PccAccT22AY.4.20.000043
ORF1ab/nsp291P91LcCacTa22AY.4.20.000043
ORF1ab/nsp291P91SCcaTca22AY.4.2.10.000298
ORF1ab/nsp291P91delCCA---22AY.430.000009
ORF1ab/nsp291P91SCcaTca22AY.450.000243
ORF1ab/nsp291P91SCcaTca22AY.550.001835
ORF1ab/nsp291P91LcCacTa22AY.560.00321
ORF1ab/nsp291P91LcCacTa22AY.690.000373
ORF1ab/nsp291P91LcCacTa22AY.70.000392
ORF1ab/nsp291P91LcCacTa22AY.740.000231
ORF1ab/nsp291P91SCcaTca22AY.740.000231
ORF1ab/nsp291P91LcCacTa22AY.840.000875
ORF1ab/nsp291P91LcCacTa22AY.880.001768
ORF1ab/nsp291P91SCcaTca22AY.9.20.000073
ORF1ab/nsp291P91SCcaTca22AY.980.000158
ORF1ab/nsp291P91PccAccT12B.10.000009
ORF1ab/nsp291P91PccAccG12B.10.000009
ORF1ab/nsp291P91TCcaAca22B.1.10.000036
ORF1ab/nsp291P91QcCacAa22B.1.10.000036
ORF1ab/nsp291P91PccAccG12B.1.10.000018
ORF1ab/nsp291P91PccAccC12B.1.10.000018
ORF1ab/nsp291P91SCcaTca22B.1.1.1760.000879
ORF1ab/nsp291P91QcCacAa22B.1.1040.00738
ORF1ab/nsp291P91LcCacTa22B.1.1310.017544
ORF1ab/nsp291P91LcCacTa22B.1.177.100.001756
ORF1ab/nsp291P91SCcaTca22B.1.177.210.000153
ORF1ab/nsp291P91PccAccG22B.1.3510.000059
ORF1ab/nsp291P91SCcaTca22B.1.3510.000059
ORF1ab/nsp291P91LcCacTa22B.1.3560.003454
ORF1ab/nsp291P91QcCacAa22B.1.3620.003082
ORF1ab/nsp291P91SCcaTca22B.1.3690.00057
ORF1ab/nsp291P91LcCacTa22B.1.3960.001411
ORF1ab/nsp291P91delCCA---22B.1.4290.000047
ORF1ab/nsp291P91SCcaTca22B.1.4530.006472
ORF1ab/nsp291P91LcCacTa22B.1.4590.008163
ORF1ab/nsp291P91SCcaTca22B.1.5600.009259
ORF1ab/nsp291P91LcCacTa22B.1.617.10.000258
ORF1ab/nsp291P91QcCacAa22B.310.007463
ORF1ab/nsp291P91TCcaAca22B.60.00182
ORF1ab/nsp291P91delCCA---22N.40.008511
ORF1ab/nsp291P91delCCA---22N.60.014184
ORF1ab/nsp291P91SCcaTca22P.1.140.000096
ORF1ab/nsp291P91PccAccG22P.1.140.000096
ORF1ab/nsp291P91QcCacAa22P.1.140.000096
ORF1ab/nsp291P91LcCacTa22P.1.70.000639
ORF1ab/nsp291P91delCCA---22P.20.000373
ORF1ab/nsp291P91SCcaTca22P.20.000373
ORF1ab/nsp291P91SCcaTca22Q.10.000253
ORF1ab/nsp291P91LcCacTa22Q.40.00091
ORF1ab/nsp291P91SCcaTca22Q.80.00033
ORF1ab/nsp291P91SCcaTca110.055556
ORF1ab/nsp291P91PccAccC110.055556
ORF1ab/nsp291P91QcCacAa11A.10.000282
ORF1ab/nsp291P91LcCacTa11A.190.009434
ORF1ab/nsp291P91SCcaTca11A.23.10.000704
ORF1ab/nsp291P91LcCacTa11AH.30.003802
ORF1ab/nsp291P91VCCaGTa11All0
ORF1ab/nsp291P91KCCaAAa11All0
ORF1ab/nsp291P91LcCacTa11AY.100.00053
ORF1ab/nsp291P91QcCacAa11AY.1000.000046
ORF1ab/nsp291P91ACcaGca11AY.1030.000006
ORF1ab/nsp291P91delCCA---11AY.1030.000006
ORF1ab/nsp291P91del1ccAcc-11AY.1030.000006
ORF1ab/nsp291P91SCcaTca11AY.1060.000335
ORF1ab/nsp291P91SCcaTca11AY.1100.000113
ORF1ab/nsp291P91LcCacTa11AY.1140.000231
ORF1ab/nsp291P91SCcaTca11AY.1150.005208
ORF1ab/nsp291P91SCcaTca11AY.1170.000085
ORF1ab/nsp291P91QcCacAa11AY.1170.000085
ORF1ab/nsp291P91PccAccT11AY.1170.000085
ORF1ab/nsp291P91QcCacAa11AY.1180.000063
ORF1ab/nsp291P91LcCacTa11AY.1200.000037
ORF1ab/nsp291P91QcCacAa11AY.1200.000037
ORF1ab/nsp291P91LcCacTa11AY.120.10.000321
ORF1ab/nsp291P91LcCacTa11AY.1210.000135
ORF1ab/nsp291P91SCcaTca11AY.130.000161
ORF1ab/nsp291P91LcCacTa11AY.160.00038
ORF1ab/nsp291P91PccAccG11AY.200.000039
ORF1ab/nsp291P91SCcaTca11AY.23.10.000417
ORF1ab/nsp291P91delCCA---11AY.250.000006
ORF1ab/nsp291P91TCcaAca11AY.250.000006
ORF1ab/nsp291P91delCCA---11AY.260.000028
ORF1ab/nsp291P91LcCacTa11AY.270.000065
ORF1ab/nsp291P91QcCacAa11AY.290.000016
ORF1ab/nsp291P91SCcaTca11AY.29.10.000221
ORF1ab/nsp291P91PccAccT11AY.30.00001
ORF1ab/nsp291P91LcCacTa11AY.3.10.000085
ORF1ab/nsp291P91SCcaTca11AY.300.000396
ORF1ab/nsp291P91LcCacTa11AY.330.000067
ORF1ab/nsp291P91SCcaTca11AY.340.000097
ORF1ab/nsp291P91LcCacTa11AY.350.000233
ORF1ab/nsp291P91PccAccG11AY.390.000025
ORF1ab/nsp291P91del1ccAcc-11AY.40.000002
ORF1ab/nsp291P91TCcaAca11AY.40.000002
ORF1ab/nsp291P91delCCA---11AY.4.50.000107
ORF1ab/nsp291P91LcCacTa11AY.4.50.000107
ORF1ab/nsp291P91SCcaTca11AY.410.000294
ORF1ab/nsp291P91VCCaGTa11AY.430.000004
ORF1ab/nsp291P91del1ccAcc-11AY.430.000004
ORF1ab/nsp291P91KCCaAAa11AY.430.000004
ORF1ab/nsp291P91SCcaTca11AY.46.10.001027
ORF1ab/nsp291P91LcCacTa11AY.480.000465
ORF1ab/nsp291P91PccAccG11AY.50.000021
ORF1ab/nsp291P91SCcaTca11AY.5.30.000337
ORF1ab/nsp291P91LcCacTa11AY.5.40.000277
ORF1ab/nsp291P91LcCacTa11AY.520.000814
ORF1ab/nsp291P91SCcaTca11AY.540.000095
ORF1ab/nsp291P91LcCacTa11AY.590.00053
ORF1ab/nsp291P91LcCacTa11AY.60.000041
ORF1ab/nsp291P91PccAccC11AY.60.000041
ORF1ab/nsp291P91LcCacTa11AY.600.000938
ORF1ab/nsp291P91delCCA---11AY.620.000436
ORF1ab/nsp291P91QcCacAa11AY.620.000436
ORF1ab/nsp291P91PccAccC11AY.650.000533
ORF1ab/nsp291P91SCcaTca11AY.650.000533
ORF1ab/nsp291P91SCcaTca11AY.700.000209
ORF1ab/nsp291P91LcCacTa11AY.700.000209
ORF1ab/nsp291P91QcCacAa11AY.750.000056
ORF1ab/nsp291P91SCcaTca11AY.750.000056
ORF1ab/nsp291P91LcCacTa11AY.75.10.00018
ORF1ab/nsp291P91QcCacAa11AY.75.10.00018
ORF1ab/nsp291P91RcCAcGT11AY.840.000437
ORF1ab/nsp291P91SCcaTca11AY.850.000427
ORF1ab/nsp291P91LcCacTa11AY.890.004902
ORF1ab/nsp291P91LcCacTa11AY.90.000068
ORF1ab/nsp291P91QcCacAa11AY.9.10.000084
ORF1ab/nsp291P91QcCacAa11AY.9.20.000037
ORF1ab/nsp291P91QcCacAa11AY.920.000287
ORF1ab/nsp291P91LcCacTa11AY.920.000287
ORF1ab/nsp291P91LcCacTa11AY.980.000079
ORF1ab/nsp291P91PccAccT11AY.990.001049
ORF1ab/nsp291P91SCcaTca11AY.99.20.000092
ORF1ab/nsp291P91del1ccAcc-11B0.000128
ORF1ab/nsp291P91delCCA---11B.10.000009
ORF1ab/nsp291P91del1Cca-ca11B.10.000009
ORF1ab/nsp291P91RcCacGa11B.10.000009
ORF1ab/nsp291P91SCcaTca11B.1.1.10.000327
ORF1ab/nsp291P91SCcaTca11B.1.1.100.001115
ORF1ab/nsp291P91SCcaTca11B.1.1.1210.002427
ORF1ab/nsp291P91del1ccAcc-11B.1.1.1370.0125
ORF1ab/nsp291P91SCcaTca11B.1.1.1610.003534
ORF1ab/nsp291P91SCcaTca11B.1.1.1630.007634
ORF1ab/nsp291P91SCcaTca11B.1.1.2160.00089
ORF1ab/nsp291P91TCcaAca11B.1.1.2220.000204
ORF1ab/nsp291P91QcCacAa11B.1.1.2220.000204
ORF1ab/nsp291P91LcCacTa11B.1.1.2360.006897
ORF1ab/nsp291P91SCcaTca11B.1.1.2650.003155
ORF1ab/nsp291P91LcCacTa11B.1.1.2840.000107
ORF1ab/nsp291P91TCcaAca11B.1.1.3060.000438
ORF1ab/nsp291P91SCcaTca11B.1.1.3160.000925
ORF1ab/nsp291P91LcCacTa11B.1.1.3260.001761
ORF1ab/nsp291P91QcCacAa11B.1.1.330.000421
ORF1ab/nsp291P91SCcaTca11B.1.1.3540.004386
ORF1ab/nsp291P91QcCacAa11B.1.1.3680.003086
ORF1ab/nsp291P91LcCacTa11B.1.1.3690.000446
ORF1ab/nsp291P91LcCacTa11B.1.1.4090.002833
ORF1ab/nsp291P91LcCacTa11B.1.1.4480.002033
ORF1ab/nsp291P91LcCacTa11B.1.1.4640.001473
ORF1ab/nsp291P91SCcaTca11B.1.1.470.005348
ORF1ab/nsp291P91LcCacTa11B.1.1.4840.1
ORF1ab/nsp291P91LcCacTa11B.1.1.5180.006329
ORF1ab/nsp291P91PccAccG11B.1.1.630.000386
ORF1ab/nsp291P91ACcaGca11B.1.1.70.000001
ORF1ab/nsp291P91GCCaGGa11B.1.1.70.000001
ORF1ab/nsp291P91delCCA---11B.1.1.700.000341
ORF1ab/nsp291P91LcCacTa11B.1.1110.001175
ORF1ab/nsp291P91LcCacTa11B.1.1470.000756
ORF1ab/nsp291P91LcCacTa11B.1.1570.002985
ORF1ab/nsp291P91LcCacTa11B.1.1600.000031
ORF1ab/nsp291P91LcCacTa11B.1.160.280.002924
ORF1ab/nsp291P91SCcaTca11B.1.1690.014925
ORF1ab/nsp291P91QcCacAa11B.1.1770.000013
ORF1ab/nsp291P91delCCA---11B.1.1770.000013
ORF1ab/nsp291P91LcCacTa11B.1.177.210.000076
ORF1ab/nsp291P91LcCacTa11B.1.177.230.003236
ORF1ab/nsp291P91LcCacTa11B.1.177.40.000211
ORF1ab/nsp291P91delCCA---11B.1.177.40.000211
ORF1ab/nsp291P91LcCacTa11B.1.177.440.000519
ORF1ab/nsp291P91delCCA---11B.1.177.510.004566
ORF1ab/nsp291P91delCCA---11B.1.177.540.000606
ORF1ab/nsp291P91SCcaTca11B.1.177.690.001484
ORF1ab/nsp291P91delCCA---11B.1.177.70.000165
ORF1ab/nsp291P91SCcaTca11B.1.177.720.00339
ORF1ab/nsp291P91LcCacTa11B.1.177.770.000726
ORF1ab/nsp291P91SCcaTca11B.1.177.810.000189
ORF1ab/nsp291P91LcCacTa11B.1.177.820.000477
ORF1ab/nsp291P91delCCA---11B.1.177.870.000728
ORF1ab/nsp291P91TCcaAca11B.1.20.000009
ORF1ab/nsp291P91del1ccAcc-11B.1.20.000009
ORF1ab/nsp291P91PccAccG11B.1.20.000009
ORF1ab/nsp291P91SCcaTca11B.1.2100.002132
ORF1ab/nsp291P91SCcaTca11B.1.220.001318
ORF1ab/nsp291P91QcCacAa11B.1.2210.000071
ORF1ab/nsp291P91SCcaTca11B.1.221.30.000833
ORF1ab/nsp291P91delCCA---11B.1.230.006061
ORF1ab/nsp291P91QcCacAa11B.1.2320.000537
ORF1ab/nsp291P91LcCacTa11B.1.2320.000537
ORF1ab/nsp291P91delCCA---11B.1.258.100.011364
ORF1ab/nsp291P91SCcaTca11B.1.258.110.000396
ORF1ab/nsp291P91QcCacAa11B.1.258.110.000396
ORF1ab/nsp291P91del1ccAcc-11B.1.258.170.000104
ORF1ab/nsp291P91SCcaTca11B.1.3060.005714
ORF1ab/nsp291P91LcCacTa11B.1.3110.000275
ORF1ab/nsp291P91RcCacGa11B.1.3110.000275
ORF1ab/nsp291P91LcCacTa11B.1.3260.007576
ORF1ab/nsp291P91del1Cca-ca11B.1.3260.007576
ORF1ab/nsp291P91PccAccT11B.1.3320.003497
ORF1ab/nsp291P91SCcaTca11B.1.3400.004292
ORF1ab/nsp291P91LcCacTa11B.1.3510.00003
ORF1ab/nsp291P91SCcaTca11B.1.351.20.000303
ORF1ab/nsp291P91SCcaTca11B.1.360.000146
ORF1ab/nsp291P91SCcaTca11B.1.36.170.000494
ORF1ab/nsp291P91SCcaTca11B.1.36.180.00042
ORF1ab/nsp291P91LcCacTa11B.1.36.80.001
ORF1ab/nsp291P91SCcaTca11B.1.3770.004566
ORF1ab/nsp291P91SCcaTca11B.1.3990.001934
ORF1ab/nsp291P91LcCacTa11B.1.4260.001009
ORF1ab/nsp291P91ACcaGca11B.1.4270.00005
ORF1ab/nsp291P91QcCacAa11B.1.4290.000024
ORF1ab/nsp291P91PccAccG11B.1.4290.000024
ORF1ab/nsp291P91SCcaTca11B.1.4410.009615
ORF1ab/nsp291P91PccAccC11B.1.466.20.000391
ORF1ab/nsp291P91SCcaTca11B.1.466.20.000391
ORF1ab/nsp291P91LcCacTa11B.1.466.20.000391
ORF1ab/nsp291P91GCCaGGa11B.1.5250.000113
ORF1ab/nsp291P91SCcaTca11B.1.5250.000113
ORF1ab/nsp291P91SCcaTca11B.1.5610.000397
ORF1ab/nsp291P91QcCacAa11B.1.5760.000907
ORF1ab/nsp291P91TCcaAca11B.1.5950.000261
ORF1ab/nsp291P91LcCacTa11B.1.5950.000261
ORF1ab/nsp291P91SCcaTca11B.1.5960.000087
ORF1ab/nsp291P91LcCacTa11B.1.5970.00463
ORF1ab/nsp291P91LcCacTa11B.1.5990.00365
ORF1ab/nsp291P91LcCacTa11B.1.6050.005952
ORF1ab/nsp291P91QcCacAa11B.1.6090.000479
ORF1ab/nsp291P91TCcaAca11B.1.6090.000479
ORF1ab/nsp291P91TCcaAca11B.1.617.10.000129
ORF1ab/nsp291P91del1ccAcc-11B.1.617.20.000004
ORF1ab/nsp291P91TCcaAca11B.1.617.20.000004
ORF1ab/nsp291P91delCCA---11B.1.617.30.002985
ORF1ab/nsp291P91SCcaTca11B.1.619.10.000641
ORF1ab/nsp291P91delCCA---11B.1.6210.000089
ORF1ab/nsp291P91LcCacTa11B.1.6230.000536
ORF1ab/nsp291P91RcCacGa11B.1.6360.006711
ORF1ab/nsp291P91LcCacTa11B.1.6360.006711
ORF1ab/nsp291P91LcCacTa11B.1.6370.000073
ORF1ab/nsp291P91PccAccC11B.530.011765
ORF1ab/nsp291P91LcCacTa11C.10.002392
ORF1ab/nsp291P91TCcaAca11C.140.004329
ORF1ab/nsp291P91LcCacTa11C.350.000774
ORF1ab/nsp291P91SCcaTca11C.370.000116
ORF1ab/nsp291P91LcCacTa11D.20.000075
ORF1ab/nsp291P91SCcaTca11D.20.000075
ORF1ab/nsp291P91LcCacTa11N.30.005814
ORF1ab/nsp291P91LcCacTa11N.50.001767
ORF1ab/nsp291P91SCcaTca11P.1.100.000269
ORF1ab/nsp291P91SCcaTca11P.1.120.000484
ORF1ab/nsp291P91LcCacTa11P.1.150.000232
ORF1ab/nsp291P91PccAccG11P.1.150.000232
ORF1ab/nsp291P91delCCA---11Q.10.000126
ORF1ab/nsp291P91LcCacTa11Q.10.000126
ORF1ab/nsp291P91SCcaTca11Q.20.000613
ORF1ab/nsp291P91PccAccT11Q.20.000613
ORF1ab/nsp291P91delCCA---11U.30.003861