CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 624 & Codon = ccC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2624P624PP804PsynccTccC3913780.9667522675-2677

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2624P624PccTccC378391All0.000072
ORF1ab/nsp2624P624PccTccC329329B.10.003013
ORF1ab/nsp2624P624PccTccC1011B.1.1.70.000009
ORF1ab/nsp2624P624PccTccC88B.1.3360.019512
ORF1ab/nsp2624P624PccTccC44AY.440.000024
ORF1ab/nsp2624P624PccTccC23AY.40.000003
ORF1ab/nsp2624P624PccTccC22B.1.1430.042553
ORF1ab/nsp2624P624PccTccC22B.1.20.000018
ORF1ab/nsp2624P624PccTccC22B.1.351.20.000605
ORF1ab/nsp2624P624PccTccC22B.1.3880.181818
ORF1ab/nsp2624P624PccTccC22B.1.617.20.000008
ORF1ab/nsp2624P624PccTccC11AY.1110.000183
ORF1ab/nsp2624P624PccTccC11AY.200.000039
ORF1ab/nsp2624P624PccTccC11AY.250.000006
ORF1ab/nsp2624P624PccTccC11AY.260.000028
ORF1ab/nsp2624P624PccTccC11AY.390.000025
ORF1ab/nsp2624P624PccTccC11AY.470.000031
ORF1ab/nsp2624P624PccTccC11AY.50.000021
ORF1ab/nsp2624P624PccTccC11AY.920.000287
ORF1ab/nsp2624P624PccTccC11B0.000128
ORF1ab/nsp2624P624PccTccC11B.1.3490.000715
ORF1ab/nsp2624P624PccTccC11B.1.36.360.000602
ORF1ab/nsp2624P624PccTccC11B.1.4170.028571
ORF1ab/nsp2624P624PccTccC11B.1.4330.003195
ORF1ab/nsp2624P624PccTccC11B.1.4700.001404
ORF1ab/nsp2624P624PccTccC11B.60.00091