CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 618

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2618K618KK798KsynaaGaaA9467946712657-2659
ORF1ab/nsp2618K618NK798NnonsynaaGaaT362535460.9782072657-2659
ORF1ab/nsp2618K618NK798NnonsynaaGaaC3625790.02179312657-2659
ORF1ab/nsp2618K618RK798RnonsynaAgaGg1911900.9947642657-2659
ORF1ab/nsp2618K618RK798RnonsynaAGaGA19110.00523562657-2659
ORF1ab/nsp2618K618delK798deldelAAG---10810812657-2659
ORF1ab/nsp2618K618MK798MnonsynaAgaTg939312657-2659
ORF1ab/nsp2618K618TK798TnonsynaAgaCg73700.9589042657-2659
ORF1ab/nsp2618K618TK798TnonsynaAGaCT7320.02739732657-2659
ORF1ab/nsp2618K618TK798TnonsynaAGaCA7310.01369862657-2659
ORF1ab/nsp2618K618QK798QnonsynAagCag45440.9777782657-2659
ORF1ab/nsp2618K618QK798QnonsynAaGCaA4510.02222222657-2659
ORF1ab/nsp2618K618EK798EnonsynAagGag262612657-2659
ORF1ab/nsp2618K618del1K798del1delAag-ag520.42657-2659
ORF1ab/nsp2618K618XK798XnonsynAagTag520.42657-2659
ORF1ab/nsp2618K618XK798XnonsynAaGTaA520.42657-2659
ORF1ab/nsp2618K618del1K798del1delAAG-TT510.22657-2659
ORF1ab/nsp2618K618del1K798del1delaAGaG-510.22657-2659
ORF1ab/nsp2618K618XK798XnonsynAAGTGA510.22657-2659
ORF1ab/nsp2618K618del1K798del1delaaGaa-510.22657-2659
ORF1ab/nsp2618K618LK798LnonsynAAgCTg420.52657-2659
ORF1ab/nsp2618K618del2K798del2delAAg--g420.52657-2659
ORF1ab/nsp2618K618LK798LnonsynAAGCTT420.52657-2659
ORF1ab/nsp2618K618del2K798del2delAAG--A410.252657-2659
ORF1ab/nsp2618K618del2K798del2delAAG--T410.252657-2659
ORF1ab/nsp2618K618PK798PnonsynAAgCCg320.6666672657-2659
ORF1ab/nsp2618K618SK798SnonsynaAGaGT320.6666672657-2659
ORF1ab/nsp2618K618PK798PnonsynAAGCCA310.3333332657-2659
ORF1ab/nsp2618K618SK798SnonsynAAGTCC310.3333332657-2659
ORF1ab/nsp2618K618IK798InonsynaAGaTT2212657-2659
ORF1ab/nsp2618K618VK798VnonsynAAGGTT210.52657-2659
ORF1ab/nsp2618K618VK798VnonsynAAgGTg210.52657-2659
ORF1ab/nsp2618K618AK798AnonsynAAgGCg1112657-2659
ORF1ab/nsp2618K618FK798FnonsynAAGTTC1112657-2659
ORF1ab/nsp2618K618WK798WnonsynAAgTGg1112657-2659

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2618K618KaaGaaA94679467All0.001811
ORF1ab/nsp2618K618KaaGaaA85378537B.1.5250.966052
ORF1ab/nsp2618K618NaaGaaT35463625All0.000678
ORF1ab/nsp2618K618NaaGaaC793625All0.000015
ORF1ab/nsp2618K618NaaGaaT12871287B.1.5260.03025
ORF1ab/nsp2618K618KaaGaaA441441AY.40.000686
ORF1ab/nsp2618K618NaaGaaT269278B.1.1.70.000241
ORF1ab/nsp2618K618NaaGaaC9278B.1.1.70.000008
ORF1ab/nsp2618K618NaaGaaT277277AM.40.989286
ORF1ab/nsp2618K618NaaGaaT202240AY.40.000314
ORF1ab/nsp2618K618NaaGaaC38240AY.40.000059
ORF1ab/nsp2618K618RaAgaGg190191All0.000036
ORF1ab/nsp2618K618RaAGaGA1191All0
ORF1ab/nsp2618K618NaaGaaT110110B.1.617.20.000414
ORF1ab/nsp2618K618delAAG---108108All0.000021
ORF1ab/nsp2618K618KaaGaaA108108B.1.1.70.000097
ORF1ab/nsp2618K618MaAgaTg9393All0.000018
ORF1ab/nsp2618K618NaaGaaT8989AY.430.000394
ORF1ab/nsp2618K618NaaGaaT8888B.1.36.20.946237
ORF1ab/nsp2618K618KaaGaaA8383B.10.00076
ORF1ab/nsp2618K618NaaGaaT7678B.10.000696
ORF1ab/nsp2618K618NaaGaaC278B.10.000018
ORF1ab/nsp2618K618TaAgaCg7073All0.000013
ORF1ab/nsp2618K618TaAGaCT273All0
ORF1ab/nsp2618K618TaAGaCA173All0
ORF1ab/nsp2618K618NaaGaaT6869B.1.20.000599
ORF1ab/nsp2618K618NaaGaaC169B.1.20.000009
ORF1ab/nsp2618K618NaaGaaT5354AY.440.000323
ORF1ab/nsp2618K618NaaGaaC154AY.440.000006
ORF1ab/nsp2618K618NaaGaaT5252B.1.10.000943
ORF1ab/nsp2618K618NaaGaaT5152B.1.4290.0012
ORF1ab/nsp2618K618NaaGaaC152B.1.4290.000024
ORF1ab/nsp2618K618KaaGaaA4646AY.320.024494
ORF1ab/nsp2618K618RaAgaGg4546B.1.1.70.00004
ORF1ab/nsp2618K618RaAGaGA146B.1.1.70.000001
ORF1ab/nsp2618K618QAagCag4445All0.000008
ORF1ab/nsp2618K618QAaGCaA145All0
ORF1ab/nsp2618K618NaaGaaT4445AY.200.00171
ORF1ab/nsp2618K618NaaGaaC145AY.200.000039
ORF1ab/nsp2618K618NaaGaaT4042P.10.00063
ORF1ab/nsp2618K618NaaGaaC242P.10.000032
ORF1ab/nsp2618K618NaaGaaT3636AY.250.000217
ORF1ab/nsp2618K618NaaGaaT3535B.1.177.870.025473
ORF1ab/nsp2618K618NaaGaaT3434AY.260.000963
ORF1ab/nsp2618K618RaAgaGg3333AY.250.000198
ORF1ab/nsp2618K618KaaGaaA3131B.1.10.000562
ORF1ab/nsp2618K618NaaGaaT3030AY.390.000741
ORF1ab/nsp2618K618NaaGaaT3030B.1.1.390.015291
ORF1ab/nsp2618K618NaaGaaT2829AY.1030.000174
ORF1ab/nsp2618K618NaaGaaC129AY.1030.000006
ORF1ab/nsp2618K618NaaGaaT2828AY.1210.003789
ORF1ab/nsp2618K618KaaGaaA2727C.1.20.114894
ORF1ab/nsp2618K618EAagGag2626All0.000005
ORF1ab/nsp2618K618KaaGaaA2424B.1.617.20.00009
ORF1ab/nsp2618K618KaaGaaA2323B.1.20.000203
ORF1ab/nsp2618K618NaaGaaT2222B.1.1.2180.169231
ORF1ab/nsp2618K618MaAgaTg2121AY.1020.000557
ORF1ab/nsp2618K618delAAG---2121B.1.1.70.000019
ORF1ab/nsp2618K618NaaGaaT1919AY.30.000189
ORF1ab/nsp2618K618NaaGaaT1919B.1.1.2220.003876
ORF1ab/nsp2618K618NaaGaaT1919B.1.5750.005765
ORF1ab/nsp2618K618NaaGaaT1919P.20.003546
ORF1ab/nsp2618K618NaaGaaT1717AY.1020.000451
ORF1ab/nsp2618K618NaaGaaT1016AY.330.000668
ORF1ab/nsp2618K618NaaGaaC616AY.330.000401
ORF1ab/nsp2618K618MaAgaTg1616AY.40.000025
ORF1ab/nsp2618K618NaaGaaT1116B.1.1.5190.000437
ORF1ab/nsp2618K618NaaGaaC516B.1.1.5190.000199
ORF1ab/nsp2618K618KaaGaaA1616B.1.5820.007851
ORF1ab/nsp2618K618NaaGaaT1616D.20.001201
ORF1ab/nsp2618K618RaAgaGg1515B.1.160.120.096154
ORF1ab/nsp2618K618NaaGaaT1515C.370.001741
ORF1ab/nsp2618K618NaaGaaT1414AY.46.60.001011
ORF1ab/nsp2618K618TaAgaCg1414AY.80.008485
ORF1ab/nsp2618K618NaaGaaT1414AY.90.000946
ORF1ab/nsp2618K618QAagCag1313B.1.1.70.000012
ORF1ab/nsp2618K618MaAgaTg1313B.1.1.70.000012
ORF1ab/nsp2618K618NaaGaaT1013B.1.1770.000132
ORF1ab/nsp2618K618NaaGaaC313B.1.1770.00004
ORF1ab/nsp2618K618NaaGaaT1212AY.50.000248
ORF1ab/nsp2618K618delAAG---1212B.10.00011
ORF1ab/nsp2618K618NaaGaaT1212B.1.258.170.001248
ORF1ab/nsp2618K618NaaGaaT1111AY.4.10.008112
ORF1ab/nsp2618K618RaAgaGg1111B.10.000101
ORF1ab/nsp2618K618KaaGaaA1111B.1.1.2940.013924
ORF1ab/nsp2618K618RaAgaGg1111B.1.20.000097
ORF1ab/nsp2618K618KaaGaaA1010AY.250.00006
ORF1ab/nsp2618K618NaaGaaT1010B.1.1.4160.00905
ORF1ab/nsp2618K618NaaGaaT1010B.1.177.210.000765
ORF1ab/nsp2618K618NaaGaaT1010B.1.2580.000665
ORF1ab/nsp2618K618QAagCag99AY.200.00035
ORF1ab/nsp2618K618RaAgaGg99AY.40.000014
ORF1ab/nsp2618K618NaaGaaT99AY.4.50.000967
ORF1ab/nsp2618K618NaaGaaT89B.1.617.10.001032
ORF1ab/nsp2618K618NaaGaaC19B.1.617.10.000129
ORF1ab/nsp2618K618KaaGaaA88AY.1030.00005
ORF1ab/nsp2618K618MaAgaTg88AY.420.000322
ORF1ab/nsp2618K618RaAgaGg88AY.460.000833
ORF1ab/nsp2618K618MaAgaTg77AY.30.00007
ORF1ab/nsp2618K618NaaGaaT77AY.7.10.000789
ORF1ab/nsp2618K618NaaGaaT77AY.98.10.000339
ORF1ab/nsp2618K618TaAgaCg77AY.98.10.000339
ORF1ab/nsp2618K618NaaGaaT77B.1.1.5070.06087
ORF1ab/nsp2618K618TaAgaCg77B.1.4000.003003
ORF1ab/nsp2618K618NaaGaaT77P.1.150.001626
ORF1ab/nsp2618K618TaAgaCg66AY.1030.000037
ORF1ab/nsp2618K618NaaGaaT66AY.290.000095
ORF1ab/nsp2618K618QAagCag66AY.40.000009
ORF1ab/nsp2618K618KaaGaaA66AY.430.000027
ORF1ab/nsp2618K618NaaGaaT66AY.46.40.000987
ORF1ab/nsp2618K618NaaGaaT66AY.540.000572
ORF1ab/nsp2618K618NaaGaaT66B.1.3510.000178
ORF1ab/nsp2618K618NaaGaaT66B.1.429.10.072289
ORF1ab/nsp2618K618KaaGaaA66B.1.5240.008439
ORF1ab/nsp2618K618KaaGaaA66C.36.3.10.016304
ORF1ab/nsp2618K618KaaGaaA66P.10.000095
ORF1ab/nsp2618K618del1Aag-ag25All0
ORF1ab/nsp2618K618XAagTag25All0
ORF1ab/nsp2618K618XAaGTaA25All0
ORF1ab/nsp2618K618del1aAGaG-15All0
ORF1ab/nsp2618K618del1AAG-TT15All0
ORF1ab/nsp2618K618del1aaGaa-15All0
ORF1ab/nsp2618K618XAAGTGA15All0
ORF1ab/nsp2618K618NaaGaaT55AY.1000.00023
ORF1ab/nsp2618K618NaaGaaT55AY.1130.000712
ORF1ab/nsp2618K618NaaGaaT55AY.1190.000177
ORF1ab/nsp2618K618NaaGaaT55AY.1200.000186
ORF1ab/nsp2618K618delAAG---55AY.430.000022
ORF1ab/nsp2618K618EAagGag55AY.430.000022
ORF1ab/nsp2618K618KaaGaaA55AY.440.00003
ORF1ab/nsp2618K618RaAgaGg55AY.90.000338
ORF1ab/nsp2618K618NaaGaaT55AY.9.20.000184
ORF1ab/nsp2618K618NaaGaaT55AY.980.000395
ORF1ab/nsp2618K618delAAG---55B.1.10.000091
ORF1ab/nsp2618K618NaaGaaT55B.1.1.2840.000537
ORF1ab/nsp2618K618NaaGaaT55B.1.1.370.000964
ORF1ab/nsp2618K618NaaGaaT55B.1.1.4030.128205
ORF1ab/nsp2618K618TaAgaCg55B.1.1.70.000004
ORF1ab/nsp2618K618NaaGaaT35B.1.2430.000209
ORF1ab/nsp2618K618NaaGaaC25B.1.2430.000139
ORF1ab/nsp2618K618TaAgaCg55B.1.2580.000333
ORF1ab/nsp2618K618NaaGaaT55B.1.4881
ORF1ab/nsp2618K618NaaGaaT55B.1.5950.001305
ORF1ab/nsp2618K618delAAG---440.222222
ORF1ab/nsp2618K618NaaGaaT44A.2.50.001996
ORF1ab/nsp2618K618del2AAg--g24All0
ORF1ab/nsp2618K618LAAgCTg24All0
ORF1ab/nsp2618K618LAAGCTT24All0
ORF1ab/nsp2618K618del2AAG--T14All0
ORF1ab/nsp2618K618del2AAG--A14All0
ORF1ab/nsp2618K618MaAgaTg44AY.250.000024
ORF1ab/nsp2618K618NaaGaaT44AY.270.000259
ORF1ab/nsp2618K618NaaGaaT34AY.610.000314
ORF1ab/nsp2618K618NaaGaaC14AY.610.000105
ORF1ab/nsp2618K618NaaGaaT44AY.7.20.002237
ORF1ab/nsp2618K618NaaGaaT44AY.740.000463
ORF1ab/nsp2618K618MaAgaTg44B.10.000037
ORF1ab/nsp2618K618TaAgaCg34B.10.000027
ORF1ab/nsp2618K618TaAGaCT14B.10.000009
ORF1ab/nsp2618K618NaaGaaT44B.1.1.4640.005891
ORF1ab/nsp2618K618NaaGaaT44B.1.110.30.002874
ORF1ab/nsp2618K618delAAG---44B.1.1770.000053
ORF1ab/nsp2618K618NaaGaaT44B.1.177.450.001525
ORF1ab/nsp2618K618QAagCag44B.1.20.000035
ORF1ab/nsp2618K618RaAgaGg44B.1.3510.000119
ORF1ab/nsp2618K618NaaGaaT44B.1.4270.000202
ORF1ab/nsp2618K618RaAgaGg44B.1.5610.001588
ORF1ab/nsp2618K618NaaGaaT44B.1.5960.000349
ORF1ab/nsp2618K618NaaGaaT44B.1.6210.000354
ORF1ab/nsp2618K618NaaGaaT33A.290.015957
ORF1ab/nsp2618K618PAAgCCg23All0
ORF1ab/nsp2618K618SaAGaGT23All0
ORF1ab/nsp2618K618SAAGTCC13All0
ORF1ab/nsp2618K618PAAGCCA13All0
ORF1ab/nsp2618K618NaaGaaT33AY.1080.003308
ORF1ab/nsp2618K618NaaGaaT33AY.1170.000254
ORF1ab/nsp2618K618RaAgaGg33AY.1180.000188
ORF1ab/nsp2618K618NaaGaaT33AY.230.000209
ORF1ab/nsp2618K618RaAgaGg33AY.270.000194
ORF1ab/nsp2618K618NaaGaaT33AY.4.20.000065
ORF1ab/nsp2618K618NaaGaaT33AY.460.000312
ORF1ab/nsp2618K618NaaGaaT33AY.470.000093
ORF1ab/nsp2618K618KaaGaaA33AY.540.000286
ORF1ab/nsp2618K618NaaGaaT33AY.590.001589
ORF1ab/nsp2618K618KaaGaaA33AY.60.000123
ORF1ab/nsp2618K618NaaGaaT33AY.920.000862
ORF1ab/nsp2618K618RaAgaGg33B.1.10.000054
ORF1ab/nsp2618K618NaaGaaT33B.1.1.2800.009259
ORF1ab/nsp2618K618delAAG---33B.1.1.330.001263
ORF1ab/nsp2618K618XAaGTaA13B.1.1.70.000001
ORF1ab/nsp2618K618XAagTag13B.1.1.70.000001
ORF1ab/nsp2618K618XAAGTGA13B.1.1.70.000001
ORF1ab/nsp2618K618EAagGag33B.1.20.000026
ORF1ab/nsp2618K618TaAgaCg33B.1.20.000026
ORF1ab/nsp2618K618TaAgaCg33B.1.2400.000647
ORF1ab/nsp2618K618KaaGaaA33B.1.2430.000209
ORF1ab/nsp2618K618NaaGaaT33B.1.2790.001541
ORF1ab/nsp2618K618EAagGag33B.1.3150.018182
ORF1ab/nsp2618K618NaaGaaT33B.1.3360.007317
ORF1ab/nsp2618K618NaaGaaT33B.1.360.000438
ORF1ab/nsp2618K618KaaGaaA33B.1.4110.011111
ORF1ab/nsp2618K618delAAG---33B.1.4290.000071
ORF1ab/nsp2618K618KaaGaaA33B.1.4290.000071
ORF1ab/nsp2618K618NaaGaaT33B.1.5760.00272
ORF1ab/nsp2618K618EAagGag33B.1.617.10.000387
ORF1ab/nsp2618K618KaaGaaA33B.1.617.10.000387
ORF1ab/nsp2618K618RaAgaGg33B.1.617.20.000011
ORF1ab/nsp2618K618TaAgaCg33B.1.617.20.000011
ORF1ab/nsp2618K618delAAG---33B.1.617.20.000011
ORF1ab/nsp2618K618NaaGaaT33B.1.6370.000219
ORF1ab/nsp2618K618RaAgaGg33P.10.000047
ORF1ab/nsp2618K618NaaGaaT33P.1.140.000143
ORF1ab/nsp2618K618del1Aag-ag220.111111
ORF1ab/nsp2618K618KaaGaaA22A0.000774
ORF1ab/nsp2618K618NaaGaaT12A.20.000662
ORF1ab/nsp2618K618NaaGaaC12A.20.000662
ORF1ab/nsp2618K618NaaGaaT22A.2.5.20.003145
ORF1ab/nsp2618K618IaAGaTT22All0
ORF1ab/nsp2618K618VAAGGTT12All0
ORF1ab/nsp2618K618VAAgGTg12All0
ORF1ab/nsp2618K618NaaGaaT22AY.1060.00067
ORF1ab/nsp2618K618NaaGaaT22AY.1110.000366
ORF1ab/nsp2618K618NaaGaaT22AY.1180.000125
ORF1ab/nsp2618K618TaAgaCg22AY.250.000012
ORF1ab/nsp2618K618NaaGaaT22AY.360.000296
ORF1ab/nsp2618K618RaAgaGg22AY.390.000049
ORF1ab/nsp2618K618NaaGaaT22AY.39.10.000079
ORF1ab/nsp2618K618delAAG---22AY.40.000003
ORF1ab/nsp2618K618NaaGaaT22AY.410.000588
ORF1ab/nsp2618K618NaaGaaT22AY.420.00008
ORF1ab/nsp2618K618MaAgaTg22AY.430.000009
ORF1ab/nsp2618K618EAagGag22AY.440.000012
ORF1ab/nsp2618K618KaaGaaA22AY.450.000243
ORF1ab/nsp2618K618NaaGaaT22AY.70.000392
ORF1ab/nsp2618K618TaAgaCg22AY.70.000392
ORF1ab/nsp2618K618NaaGaaT22AY.710.00095
ORF1ab/nsp2618K618RaAgaGg22AY.850.000854
ORF1ab/nsp2618K618NaaGaaT22AY.880.001768
ORF1ab/nsp2618K618KaaGaaA22B0.000256
ORF1ab/nsp2618K618LAAGCTT12B.10.000009
ORF1ab/nsp2618K618LAAgCTg12B.10.000009
ORF1ab/nsp2618K618QAagCag12B.1.10.000018
ORF1ab/nsp2618K618PAAgCCg12B.1.10.000018
ORF1ab/nsp2618K618TaAGaCA12B.1.10.000018
ORF1ab/nsp2618K618QAaGCaA12B.1.10.000018
ORF1ab/nsp2618K618PAAGCCA12B.1.10.000018
ORF1ab/nsp2618K618TaAgaCg12B.1.10.000018
ORF1ab/nsp2618K618NaaGaaT22B.1.1.2940.002532
ORF1ab/nsp2618K618delAAG---22B.1.1.3150.016949
ORF1ab/nsp2618K618NaaGaaT22B.1.1.3220.017544
ORF1ab/nsp2618K618NaaGaaT22B.1.1.3260.003521
ORF1ab/nsp2618K618delAAG---22B.1.1.3480.001592
ORF1ab/nsp2618K618NaaGaaT22B.1.1.3850.008929
ORF1ab/nsp2618K618TaAgaCg22B.1.1.3980.006452
ORF1ab/nsp2618K618KaaGaaA22B.1.1.4340.000697
ORF1ab/nsp2618K618NaaGaaT22B.1.1.440.004819
ORF1ab/nsp2618K618delAAG---22B.1.1.460.008734
ORF1ab/nsp2618K618KaaGaaA22B.1.1.5190.000079
ORF1ab/nsp2618K618KaaGaaA22B.1.1.630.000772
ORF1ab/nsp2618K618NaaGaaT12B.1.1.630.000386
ORF1ab/nsp2618K618NaaGaaC12B.1.1.630.000386
ORF1ab/nsp2618K618del2AAG--A12B.1.1.70.000001
ORF1ab/nsp2618K618del2AAG--T12B.1.1.70.000001
ORF1ab/nsp2618K618MaAgaTg22B.1.1770.000026
ORF1ab/nsp2618K618NaaGaaT22B.1.177.40.000422
ORF1ab/nsp2618K618NaaGaaT22B.1.177.570.000562
ORF1ab/nsp2618K618KaaGaaA22B.1.2400.000431
ORF1ab/nsp2618K618RaAgaGg22B.1.2430.000139
ORF1ab/nsp2618K618QAagCag22B.1.3510.000059
ORF1ab/nsp2618K618KaaGaaA22B.1.360.000292
ORF1ab/nsp2618K618delAAG---22B.1.4240.016129
ORF1ab/nsp2618K618RaAgaGg22B.1.4270.000101
ORF1ab/nsp2618K618delAAG---22B.1.5260.000047
ORF1ab/nsp2618K618KaaGaaA22B.1.5750.000607
ORF1ab/nsp2618K618MaAgaTg22B.1.617.20.000008
ORF1ab/nsp2618K618QAagCag22B.1.617.20.000008
ORF1ab/nsp2618K618EAagGag22B.1.617.20.000008
ORF1ab/nsp2618K618NaaGaaT22B.1.621.10.001012
ORF1ab/nsp2618K618TaAgaCg22C.160.002121
ORF1ab/nsp2618K618NaaGaaT22C.360.001821
ORF1ab/nsp2618K618delAAG---22N.60.014184
ORF1ab/nsp2618K618delAAG---22P.10.000032
ORF1ab/nsp2618K618TaAgaCg22P.1.150.000465
ORF1ab/nsp2618K618NaaGaaT22P.1.70.000639
ORF1ab/nsp2618K618NaaGaaT22Q.30.00029
ORF1ab/nsp2618K618NaaGaaT11A.2.40.003367
ORF1ab/nsp2618K618NaaGaaT11A.23.10.000704
ORF1ab/nsp2618K618MaAgaTg11A.30.002096
ORF1ab/nsp2618K618NaaGaaC11AD.20.000219
ORF1ab/nsp2618K618FAAGTTC11All0
ORF1ab/nsp2618K618WAAgTGg11All0
ORF1ab/nsp2618K618AAAgGCg11All0
ORF1ab/nsp2618K618RaAgaGg11AU.30.00211
ORF1ab/nsp2618K618KaaGaaA11AY.1000.000046
ORF1ab/nsp2618K618QAagCag11AY.1020.000027
ORF1ab/nsp2618K618KaaGaaA11AY.1020.000027
ORF1ab/nsp2618K618RaAgaGg11AY.1020.000027
ORF1ab/nsp2618K618delAAG---11AY.1030.000006
ORF1ab/nsp2618K618SaAGaGT11AY.1080.001103
ORF1ab/nsp2618K618delAAG---11AY.1080.001103
ORF1ab/nsp2618K618NaaGaaT11AY.1090.00074
ORF1ab/nsp2618K618RaAgaGg11AY.1190.000035
ORF1ab/nsp2618K618KaaGaaA11AY.1190.000035
ORF1ab/nsp2618K618KaaGaaA11AY.140.000088
ORF1ab/nsp2618K618del1aaGaa-11AY.160.00038
ORF1ab/nsp2618K618del2AAg--g11AY.190.00114
ORF1ab/nsp2618K618NaaGaaT11AY.190.00114
ORF1ab/nsp2618K618NaaGaaT11AY.20.000356
ORF1ab/nsp2618K618KaaGaaA11AY.230.00007
ORF1ab/nsp2618K618NaaGaaT11AY.240.000431
ORF1ab/nsp2618K618delAAG---11AY.250.000006
ORF1ab/nsp2618K618RaAgaGg11AY.260.000028
ORF1ab/nsp2618K618RaAgaGg11AY.290.000016
ORF1ab/nsp2618K618KaaGaaA11AY.290.000016
ORF1ab/nsp2618K618delAAG---11AY.30.00001
ORF1ab/nsp2618K618RaAgaGg11AY.30.00001
ORF1ab/nsp2618K618KaaGaaA11AY.330.000067
ORF1ab/nsp2618K618NaaGaaT11AY.340.000097
ORF1ab/nsp2618K618EAagGag11AY.340.000097
ORF1ab/nsp2618K618NaaGaaT11AY.350.000233
ORF1ab/nsp2618K618RaAgaGg11AY.360.000148
ORF1ab/nsp2618K618EAagGag11AY.4.20.000022
ORF1ab/nsp2618K618KaaGaaA11AY.4.20.000022
ORF1ab/nsp2618K618delAAG---11AY.400.000964
ORF1ab/nsp2618K618del1AAG-TT11AY.430.000004
ORF1ab/nsp2618K618RaAgaGg11AY.430.000004
ORF1ab/nsp2618K618RaAgaGg11AY.440.000006
ORF1ab/nsp2618K618XAagTag11AY.440.000006
ORF1ab/nsp2618K618MaAgaTg11AY.440.000006
ORF1ab/nsp2618K618MaAgaTg11AY.460.000104
ORF1ab/nsp2618K618NaaGaaT11AY.46.20.000635
ORF1ab/nsp2618K618KaaGaaA11AY.470.000031
ORF1ab/nsp2618K618TaAgaCg11AY.470.000031
ORF1ab/nsp2618K618EAagGag11AY.470.000031
ORF1ab/nsp2618K618NaaGaaT11AY.480.000465
ORF1ab/nsp2618K618NaaGaaT11AY.5.30.000337
ORF1ab/nsp2618K618NaaGaaT11AY.5.40.000277
ORF1ab/nsp2618K618NaaGaaT11AY.510.000909
ORF1ab/nsp2618K618SaAGaGT11AY.550.000917
ORF1ab/nsp2618K618NaaGaaT11AY.550.000917
ORF1ab/nsp2618K618NaaGaaT11AY.60.000041
ORF1ab/nsp2618K618delAAG---11AY.60.000041
ORF1ab/nsp2618K618QAagCag11AY.60.000041
ORF1ab/nsp2618K618MaAgaTg11AY.60.000041
ORF1ab/nsp2618K618RaAgaGg11AY.610.000105
ORF1ab/nsp2618K618NaaGaaT11AY.630.000387
ORF1ab/nsp2618K618NaaGaaT11AY.640.000595
ORF1ab/nsp2618K618delAAG---11AY.680.000274
ORF1ab/nsp2618K618KaaGaaA11AY.680.000274
ORF1ab/nsp2618K618MaAgaTg11AY.690.000187
ORF1ab/nsp2618K618delAAG---11AY.730.000665
ORF1ab/nsp2618K618MaAgaTg11AY.740.000116
ORF1ab/nsp2618K618KaaGaaA11AY.750.000056
ORF1ab/nsp2618K618QAagCag11AY.750.000056
ORF1ab/nsp2618K618NaaGaaT11AY.75.10.00018
ORF1ab/nsp2618K618EAagGag11AY.75.10.00018
ORF1ab/nsp2618K618MaAgaTg11AY.830.001724
ORF1ab/nsp2618K618FAAGTTC11AY.850.000427
ORF1ab/nsp2618K618SAAGTCC11AY.850.000427
ORF1ab/nsp2618K618NaaGaaT11AY.9.10.000084
ORF1ab/nsp2618K618KaaGaaA11AY.9.10.000084
ORF1ab/nsp2618K618NaaGaaT11AY.930.000273
ORF1ab/nsp2618K618KaaGaaA11AY.930.000273
ORF1ab/nsp2618K618delAAG---11AY.98.10.000048
ORF1ab/nsp2618K618MaAgaTg11AY.99.20.000092
ORF1ab/nsp2618K618NaaGaaT11AY.99.20.000092
ORF1ab/nsp2618K618NaaGaaT11B0.000128
ORF1ab/nsp2618K618del2AAg--g11B.10.000009
ORF1ab/nsp2618K618IaAGaTT11B.10.000009
ORF1ab/nsp2618K618NaaGaaT11B.1.1.10.000327
ORF1ab/nsp2618K618NaaGaaT11B.1.1.100.001115
ORF1ab/nsp2618K618NaaGaaT11B.1.1.1290.009174
ORF1ab/nsp2618K618NaaGaaT11B.1.1.1360.021277
ORF1ab/nsp2618K618delAAG---11B.1.1.1390.022727
ORF1ab/nsp2618K618KaaGaaA11B.1.1.1700.001247
ORF1ab/nsp2618K618NaaGaaT11B.1.1.1860.003436
ORF1ab/nsp2618K618NaaGaaT11B.1.1.1980.001468
ORF1ab/nsp2618K618MaAgaTg11B.1.1.2140.000055
ORF1ab/nsp2618K618NaaGaaT11B.1.1.2140.000055
ORF1ab/nsp2618K618NaaGaaT11B.1.1.2160.00089
ORF1ab/nsp2618K618KaaGaaA11B.1.1.2220.000204
ORF1ab/nsp2618K618NaaGaaT11B.1.1.2540.011236
ORF1ab/nsp2618K618LAAGCTT11B.1.1.2580.003257
ORF1ab/nsp2618K618NaaGaaT11B.1.1.280.000311
ORF1ab/nsp2618K618QAagCag11B.1.1.2890.002083
ORF1ab/nsp2618K618KaaGaaA11B.1.1.3060.000438
ORF1ab/nsp2618K618RaAgaGg11B.1.1.3180.000302
ORF1ab/nsp2618K618NaaGaaT11B.1.1.330.000421
ORF1ab/nsp2618K618NaaGaaT11B.1.1.3530.020833
ORF1ab/nsp2618K618KaaGaaA11B.1.1.3640.066667
ORF1ab/nsp2618K618NaaGaaT11B.1.1.3720.000689
ORF1ab/nsp2618K618KaaGaaA11B.1.1.4020.011111
ORF1ab/nsp2618K618NaaGaaT11B.1.1.4090.002833
ORF1ab/nsp2618K618delAAG---11B.1.1.4160.000905
ORF1ab/nsp2618K618NaaGaaT11B.1.1.4200.001006
ORF1ab/nsp2618K618NaaGaaT11B.1.1.4320.001266
ORF1ab/nsp2618K618NaaGaaT11B.1.1.4340.000349
ORF1ab/nsp2618K618delAAG---11B.1.1.4480.002033
ORF1ab/nsp2618K618NaaGaaT11B.1.1.500.000679
ORF1ab/nsp2618K618delAAG---11B.1.1.5170.006803
ORF1ab/nsp2618K618NaaGaaT11B.1.1.5180.006329
ORF1ab/nsp2618K618NaaGaaT11B.1.1.5250.005464
ORF1ab/nsp2618K618NaaGaaT11B.1.1.5260.003546
ORF1ab/nsp2618K618LAAgCTg11B.1.1.70.000001
ORF1ab/nsp2618K618EAagGag11B.1.1.70.000001
ORF1ab/nsp2618K618VAAgGTg11B.1.1.70.000001
ORF1ab/nsp2618K618WAAgTGg11B.1.1.70.000001
ORF1ab/nsp2618K618delAAG---11B.1.1.700.000341
ORF1ab/nsp2618K618RaAgaGg11B.1.1110.001175
ORF1ab/nsp2618K618delAAG---11B.1.1400.018868
ORF1ab/nsp2618K618TaAgaCg11B.1.1570.002985
ORF1ab/nsp2618K618delAAG---11B.1.1600.000031
ORF1ab/nsp2618K618NaaGaaT11B.1.1600.000031
ORF1ab/nsp2618K618NaaGaaT11B.1.177.110.001698
ORF1ab/nsp2618K618RaAgaGg11B.1.177.120.000152
ORF1ab/nsp2618K618delAAG---11B.1.177.150.000631
ORF1ab/nsp2618K618RaAgaGg11B.1.177.190.001431
ORF1ab/nsp2618K618NaaGaaT11B.1.177.580.001332
ORF1ab/nsp2618K618delAAG---11B.1.177.620.001192
ORF1ab/nsp2618K618NaaGaaC11B.1.177.650.000665
ORF1ab/nsp2618K618NaaGaaT11B.1.177.770.000726
ORF1ab/nsp2618K618NaaGaaT11B.1.177.810.000189
ORF1ab/nsp2618K618KaaGaaA11B.1.177.870.000728
ORF1ab/nsp2618K618del1aAGaG-11B.1.20.000009
ORF1ab/nsp2618K618delAAG---11B.1.20.000009
ORF1ab/nsp2618K618KaaGaaA11B.1.214.20.0006
ORF1ab/nsp2618K618NaaGaaT11B.1.214.30.007143
ORF1ab/nsp2618K618EAagGag11B.1.2340.000132
ORF1ab/nsp2618K618NaaGaaT11B.1.2340.000132
ORF1ab/nsp2618K618NaaGaaT11B.1.2400.000216
ORF1ab/nsp2618K618MaAgaTg11B.1.2430.00007
ORF1ab/nsp2618K618delAAG---11B.1.2580.000067
ORF1ab/nsp2618K618NaaGaaT11B.1.30.002618
ORF1ab/nsp2618K618KaaGaaA11B.1.3110.000275
ORF1ab/nsp2618K618NaaGaaT11B.1.3400.004292
ORF1ab/nsp2618K618delAAG---11B.1.3510.00003
ORF1ab/nsp2618K618MaAgaTg11B.1.3510.00003
ORF1ab/nsp2618K618RaAgaGg11B.1.360.000146
ORF1ab/nsp2618K618NaaGaaT11B.1.36.170.000494
ORF1ab/nsp2618K618NaaGaaT11B.1.36.290.000517
ORF1ab/nsp2618K618KaaGaaA11B.1.36.360.000602
ORF1ab/nsp2618K618KaaGaaA11B.1.36.80.001
ORF1ab/nsp2618K618NaaGaaT11B.1.3610.001289
ORF1ab/nsp2618K618NaaGaaT11B.1.3620.001541
ORF1ab/nsp2618K618NaaGaaT11B.1.3690.000285
ORF1ab/nsp2618K618delAAG---11B.1.4040.001302
ORF1ab/nsp2618K618KaaGaaA11B.1.416.10.001563
ORF1ab/nsp2618K618delAAG---11B.1.4270.00005
ORF1ab/nsp2618K618RaAgaGg11B.1.4290.000024
ORF1ab/nsp2618K618NaaGaaT11B.1.438.10.000107
ORF1ab/nsp2618K618NaaGaaT11B.1.4530.003236
ORF1ab/nsp2618K618NaaGaaT11B.1.4590.004082
ORF1ab/nsp2618K618PAAgCCg11B.1.466.20.000391
ORF1ab/nsp2618K618NaaGaaT11B.1.466.20.000391
ORF1ab/nsp2618K618RaAgaGg11B.1.466.20.000391
ORF1ab/nsp2618K618NaaGaaT11B.1.4700.001404
ORF1ab/nsp2618K618QAagCag11B.1.4970.000315
ORF1ab/nsp2618K618AAAgGCg11B.1.4970.000315
ORF1ab/nsp2618K618NaaGaaT11B.1.4970.000315
ORF1ab/nsp2618K618NaaGaaT11B.1.4990.00105
ORF1ab/nsp2618K618KaaGaaA11B.1.5260.000024
ORF1ab/nsp2618K618KaaGaaA11B.1.5560.007519
ORF1ab/nsp2618K618delAAG---11B.1.5610.000397
ORF1ab/nsp2618K618MaAgaTg11B.1.5610.000397
ORF1ab/nsp2618K618KaaGaaA11B.1.5650.00081
ORF1ab/nsp2618K618NaaGaaT11B.1.5820.000491
ORF1ab/nsp2618K618RaAgaGg11B.1.5820.000491
ORF1ab/nsp2618K618QAagCag11B.1.5950.000261
ORF1ab/nsp2618K618KaaGaaA11B.1.5960.000087
ORF1ab/nsp2618K618NaaGaaT11B.1.5970.00463
ORF1ab/nsp2618K618NaaGaaT11B.1.6000.005848
ORF1ab/nsp2618K618NaaGaaC11B.1.6090.000479
ORF1ab/nsp2618K618delAAG---11B.1.617.10.000129
ORF1ab/nsp2618K618TaAGaCT11B.1.617.10.000129
ORF1ab/nsp2618K618XAaGTaA11B.1.617.10.000129
ORF1ab/nsp2618K618IaAGaTT11B.1.617.10.000129
ORF1ab/nsp2618K618VAAGGTT11B.1.617.20.000004
ORF1ab/nsp2618K618RaAgaGg11B.1.6180.004032
ORF1ab/nsp2618K618RaAgaGg11B.1.6210.000089
ORF1ab/nsp2618K618EAagGag11B.1.6210.000089
ORF1ab/nsp2618K618delAAG---11B.1.6210.000089
ORF1ab/nsp2618K618delAAG---11B.1.621.10.000506
ORF1ab/nsp2618K618NaaGaaT11B.1.6280.000352
ORF1ab/nsp2618K618RaAgaGg11B.1.6370.000073
ORF1ab/nsp2618K618KaaGaaA11B.1.6370.000073
ORF1ab/nsp2618K618NaaGaaT11B.1.80.001972
ORF1ab/nsp2618K618NaaGaaT11B.310.003731
ORF1ab/nsp2618K618KaaGaaA11B.550.00295
ORF1ab/nsp2618K618delAAG---11B.570.015152
ORF1ab/nsp2618K618NaaGaaT11B.570.015152
ORF1ab/nsp2618K618NaaGaaT11B.60.00091
ORF1ab/nsp2618K618KaaGaaA11C.10.002392
ORF1ab/nsp2618K618NaaGaaT11C.160.00106
ORF1ab/nsp2618K618KaaGaaA11C.360.000911
ORF1ab/nsp2618K618RaAgaGg11C.370.000116
ORF1ab/nsp2618K618KaaGaaA11D.20.000075
ORF1ab/nsp2618K618EAagGag11D.20.000075
ORF1ab/nsp2618K618QAagCag11P.10.000016
ORF1ab/nsp2618K618TaAgaCg11P.10.000016
ORF1ab/nsp2618K618MaAgaTg11P.1.100.000269
ORF1ab/nsp2618K618KaaGaaA11P.1.100.000269
ORF1ab/nsp2618K618NaaGaaT11P.1.10.20.041667
ORF1ab/nsp2618K618NaaGaaT11P.1.120.000484
ORF1ab/nsp2618K618KaaGaaA11P.1.140.000048
ORF1ab/nsp2618K618MaAgaTg11P.1.150.000232
ORF1ab/nsp2618K618delAAG---11P.1.150.000232
ORF1ab/nsp2618K618NaaGaaT11P.1.160.000374
ORF1ab/nsp2618K618KaaGaaA11P.30.001595
ORF1ab/nsp2618K618NaaGaaT11Q.10.000126
ORF1ab/nsp2618K618KaaGaaA11Q.40.000455
ORF1ab/nsp2618K618delAAG---11Q.80.000165
ORF1ab/nsp2618K618NaaGaaT11R.10.00009
ORF1ab/nsp2618K618delAAG---11R.10.00009
ORF1ab/nsp2618K618delAAG---11U.30.003861