CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 613

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2613I613II793IsynatCatT505645200.8939872642-2644
ORF1ab/nsp2613I613II793IsynatCatA50565360.1060132642-2644
ORF1ab/nsp2613I613VI793VnonsynAtcGtc4584550.993452642-2644
ORF1ab/nsp2613I613VI793VnonsynAtCGtT45820.004366812642-2644
ORF1ab/nsp2613I613VI793VnonsynAtCGtA45810.002183412642-2644
ORF1ab/nsp2613I613delI793deldelATC---12312312642-2644
ORF1ab/nsp2613I613LI793LnonsynAtcCtc282812642-2644
ORF1ab/nsp2613I613TI793TnonsynaTcaCc141412642-2644
ORF1ab/nsp2613I613FI793FnonsynAtcTtc121212642-2644
ORF1ab/nsp2613I613SI793SnonsynaTcaGc860.752642-2644
ORF1ab/nsp2613I613SI793SnonsynaTCaGT810.1252642-2644
ORF1ab/nsp2613I613SI793SnonsynATCTCT810.1252642-2644
ORF1ab/nsp2613I613del1I793del1delAtc-tc760.8571432642-2644
ORF1ab/nsp2613I613del1I793del1delATc-Cc710.1428572642-2644
ORF1ab/nsp2613I613del2I793del2delATc--c6612642-2644
ORF1ab/nsp2613I613MI793MnonsynatCatG4412642-2644
ORF1ab/nsp2613I613GI793GnonsynATCGGT210.52642-2644
ORF1ab/nsp2613I613GI793GnonsynATCGGA210.52642-2644
ORF1ab/nsp2613I613CI793CnonsynATcTGc1112642-2644
ORF1ab/nsp2613I613NI793NnonsynaTcaAc1112642-2644
ORF1ab/nsp2613I613RI793RnonsynaTCaGA1112642-2644

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2613I613IatCatT45205056All0.000865
ORF1ab/nsp2613I613IatCatA5365056All0.000103
ORF1ab/nsp2613I613IatCatT887905B.1.1.70.000794
ORF1ab/nsp2613I613IatCatA18905B.1.1.70.000016
ORF1ab/nsp2613I613VAtcGtc455458All0.000087
ORF1ab/nsp2613I613VAtCGtT2458All0
ORF1ab/nsp2613I613VAtCGtA1458All0
ORF1ab/nsp2613I613IatCatT393400AY.40.000612
ORF1ab/nsp2613I613IatCatA7400AY.40.000011
ORF1ab/nsp2613I613IatCatA246250B.1.2580.016371
ORF1ab/nsp2613I613IatCatT4250B.1.2580.000266
ORF1ab/nsp2613I613IatCatT228245B.1.617.20.000859
ORF1ab/nsp2613I613IatCatA17245B.1.617.20.000064
ORF1ab/nsp2613I613IatCatT198199AY.1030.001229
ORF1ab/nsp2613I613IatCatA1199AY.1030.000006
ORF1ab/nsp2613I613IatCatT179179B.1.177.460.164371
ORF1ab/nsp2613I613IatCatT170170B.1.1.5190.006751
ORF1ab/nsp2613I613IatCatT142145B.1.20.00125
ORF1ab/nsp2613I613IatCatA3145B.1.20.000026
ORF1ab/nsp2613I613IatCatT127127AY.9.20.004665
ORF1ab/nsp2613I613delATC---123123All0.000024
ORF1ab/nsp2613I613IatCatT123123B.1.6320.825503
ORF1ab/nsp2613I613IatCatT111119AY.430.000492
ORF1ab/nsp2613I613IatCatA8119AY.430.000035
ORF1ab/nsp2613I613VAtcGtc114116B.1.1.70.000102
ORF1ab/nsp2613I613VAtCGtA1116B.1.1.70.000001
ORF1ab/nsp2613I613VAtCGtT1116B.1.1.70.000001
ORF1ab/nsp2613I613IatCatT100100B.1.5260.00235
ORF1ab/nsp2613I613IatCatT7882AY.440.000475
ORF1ab/nsp2613I613IatCatA482AY.440.000024
ORF1ab/nsp2613I613IatCatT8182P.10.001276
ORF1ab/nsp2613I613IatCatA182P.10.000016
ORF1ab/nsp2613I613IatCatT7478AY.250.000445
ORF1ab/nsp2613I613IatCatA478AY.250.000024
ORF1ab/nsp2613I613IatCatT7575B.1.1600.002339
ORF1ab/nsp2613I613IatCatT7373B.1.1770.000961
ORF1ab/nsp2613I613IatCatT6972AY.30.000686
ORF1ab/nsp2613I613IatCatA372AY.30.00003
ORF1ab/nsp2613I613IatCatT7171B.1.3490.050751
ORF1ab/nsp2613I613IatCatT5470B.10.000495
ORF1ab/nsp2613I613IatCatA1670B.10.000147
ORF1ab/nsp2613I613IatCatA4868AY.50.000991
ORF1ab/nsp2613I613IatCatT2068AY.50.000413
ORF1ab/nsp2613I613IatCatT5664B.1.10.001016
ORF1ab/nsp2613I613IatCatA864B.1.10.000145
ORF1ab/nsp2613I613IatCatT6464B.1.36.260.182857
ORF1ab/nsp2613I613IatCatT6262AY.410.018225
ORF1ab/nsp2613I613IatCatT6162B.1.4270.00308
ORF1ab/nsp2613I613IatCatA162B.1.4270.00005
ORF1ab/nsp2613I613IatCatA5858B.1.1.2310.179567
ORF1ab/nsp2613I613VAtcGtc5454AY.90.00365
ORF1ab/nsp2613I613VAtcGtc5353AY.40.000082
ORF1ab/nsp2613I613IatCatT3843AY.1020.001008
ORF1ab/nsp2613I613IatCatA543AY.1020.000133
ORF1ab/nsp2613I613IatCatT4141C.370.004759
ORF1ab/nsp2613I613IatCatT3940B.1.2430.002714
ORF1ab/nsp2613I613IatCatA140B.1.2430.00007
ORF1ab/nsp2613I613IatCatT3535B.1.5960.00305
ORF1ab/nsp2613I613IatCatT3434AY.260.000963
ORF1ab/nsp2613I613IatCatT3131B.1.3510.000922
ORF1ab/nsp2613I613IatCatT3131B.1.4290.000729
ORF1ab/nsp2613I613IatCatA2631B.1.438.10.002789
ORF1ab/nsp2613I613IatCatT531B.1.438.10.000536
ORF1ab/nsp2613I613IatCatT3030B.1.1.2140.001664
ORF1ab/nsp2613I613LAtcCtc2828All0.000005
ORF1ab/nsp2613I613delATC---2727B.1.1.70.000024
ORF1ab/nsp2613I613VAtcGtc2727B.1.617.20.000102
ORF1ab/nsp2613I613VAtcGtc2424AY.200.000933
ORF1ab/nsp2613I613IatCatT2121R.10.00189
ORF1ab/nsp2613I613IatCatT2020AY.1170.00169
ORF1ab/nsp2613I613IatCatT2020B.1.1.630.007716
ORF1ab/nsp2613I613IatCatT1819AY.470.00056
ORF1ab/nsp2613I613IatCatA119AY.470.000031
ORF1ab/nsp2613I613IatCatT1919B.1.351.30.016652
ORF1ab/nsp2613I613IatCatT1919B.1.6370.001388
ORF1ab/nsp2613I613IatCatT1717AY.39.10.000673
ORF1ab/nsp2613I613IatCatT1717B.1.5770.011684
ORF1ab/nsp2613I613IatCatT1515AY.390.000371
ORF1ab/nsp2613I613IatCatT1515B.1.1.1960.085714
ORF1ab/nsp2613I613IatCatT1515B.1.6090.007191
ORF1ab/nsp2613I613TaTcaCc1414All0.000003
ORF1ab/nsp2613I613IatCatA813AY.1000.000368
ORF1ab/nsp2613I613IatCatT513AY.1000.00023
ORF1ab/nsp2613I613IatCatT1313AY.1190.000459
ORF1ab/nsp2613I613delATC---1313B.10.000119
ORF1ab/nsp2613I613VAtcGtc1313C.370.001509
ORF1ab/nsp2613I613FAtcTtc1212All0.000002
ORF1ab/nsp2613I613IatCatT1012AY.140.00088
ORF1ab/nsp2613I613IatCatA212AY.140.000176
ORF1ab/nsp2613I613IatCatT1212AY.3.10.001023
ORF1ab/nsp2613I613IatCatT1011AY.200.000389
ORF1ab/nsp2613I613IatCatA111AY.200.000039
ORF1ab/nsp2613I613IatCatT1111AY.290.000174
ORF1ab/nsp2613I613IatCatT1111B.1.3690.003137
ORF1ab/nsp2613I613IatCatT1111B.1.5250.001245
ORF1ab/nsp2613I613IatCatT1011B.1.6210.000885
ORF1ab/nsp2613I613IatCatA111B.1.6210.000089
ORF1ab/nsp2613I613IatCatT1010AY.750.00056
ORF1ab/nsp2613I613IatCatT910AY.98.10.000436
ORF1ab/nsp2613I613IatCatA110AY.98.10.000048
ORF1ab/nsp2613I613IatCatT1010AY.99.20.000922
ORF1ab/nsp2613I613IatCatT1010B.1.1.250.005685
ORF1ab/nsp2613I613LAtcCtc99AY.250.000054
ORF1ab/nsp2613I613IatCatT99AY.340.000873
ORF1ab/nsp2613I613IatCatT79AY.610.000733
ORF1ab/nsp2613I613IatCatA29AY.610.00021
ORF1ab/nsp2613I613IatCatT99AY.7.10.001014
ORF1ab/nsp2613I613IatCatT99B.1.177.870.00655
ORF1ab/nsp2613I613VAtcGtc99B.1.20.000079
ORF1ab/nsp2613I613IatCatT99B.1.258.170.000936
ORF1ab/nsp2613I613IatCatT99B.1.360.001313
ORF1ab/nsp2613I613SaTcaGc68All0.000001
ORF1ab/nsp2613I613SATCTCT18All0
ORF1ab/nsp2613I613SaTCaGT18All0
ORF1ab/nsp2613I613IatCatT78AY.1200.00026
ORF1ab/nsp2613I613IatCatA18AY.1200.000037
ORF1ab/nsp2613I613VAtcGtc88AY.260.000226
ORF1ab/nsp2613I613IatCatT88AY.510.007273
ORF1ab/nsp2613I613IatCatT88B.1.177.320.010796
ORF1ab/nsp2613I613IatCatA88B.1.177.540.004851
ORF1ab/nsp2613I613del1Atc-tc67All0.000001
ORF1ab/nsp2613I613del1ATc-Cc17All0
ORF1ab/nsp2613I613VAtcGtc77AY.1030.000043
ORF1ab/nsp2613I613IatCatT77AY.1110.001282
ORF1ab/nsp2613I613IatCatT77AY.1130.000997
ORF1ab/nsp2613I613IatCatT77AY.330.000467
ORF1ab/nsp2613I613VAtcGtc77B.1.10.000127
ORF1ab/nsp2613I613IatCatT77B.1.1.2630.010903
ORF1ab/nsp2613I613VAtcGtc77B.1.1770.000092
ORF1ab/nsp2613I613IatCatT77B.400.00255
ORF1ab/nsp2613I613IatCatT77Q.80.001154
ORF1ab/nsp2613I613del2ATc--c66All0.000001
ORF1ab/nsp2613I613IatCatT66AY.1160.001721
ORF1ab/nsp2613I613VAtcGtc66AY.30.00006
ORF1ab/nsp2613I613IatCatT66AY.420.000241
ORF1ab/nsp2613I613VAtcGtc66AY.430.000027
ORF1ab/nsp2613I613IatCatA36AY.840.001312
ORF1ab/nsp2613I613IatCatT36AY.840.001312
ORF1ab/nsp2613I613delATC---66B.1.10.000109
ORF1ab/nsp2613I613TaTcaCc66B.1.1.70.000005
ORF1ab/nsp2613I613delATC---66B.1.1770.000079
ORF1ab/nsp2613I613IatCatT66P.1.140.000287
ORF1ab/nsp2613I613VAtcGtc66P.1.140.000287
ORF1ab/nsp2613I613IatCatT66Q.30.00087
ORF1ab/nsp2613I613VAtcGtc55AY.1020.000133
ORF1ab/nsp2613I613IatCatT55AY.1210.000677
ORF1ab/nsp2613I613IatCatT55AY.360.000741
ORF1ab/nsp2613I613IatCatT55AY.4.20.000108
ORF1ab/nsp2613I613delATC---55AY.430.000022
ORF1ab/nsp2613I613VAtcGtc55AY.440.00003
ORF1ab/nsp2613I613IatCatT55AY.620.002179
ORF1ab/nsp2613I613VAtcGtc55B.1.1.5190.000199
ORF1ab/nsp2613I613IatCatT45B.1.2210.000284
ORF1ab/nsp2613I613IatCatA15B.1.2210.000071
ORF1ab/nsp2613I613VAtcGtc55B.1.2580.000333
ORF1ab/nsp2613I613IatCatT55B.1.617.10.000645
ORF1ab/nsp2613I613VAtcGtc55P.10.000079
ORF1ab/nsp2613I613IatCatT55P.20.000933
ORF1ab/nsp2613I613delATC---440.222222
ORF1ab/nsp2613I613IatCatA44AA.40.036364
ORF1ab/nsp2613I613MatCatG44All0.000001
ORF1ab/nsp2613I613IatCatT44AY.10.001583
ORF1ab/nsp2613I613IatCatA24AY.130.000322
ORF1ab/nsp2613I613IatCatT24AY.130.000322
ORF1ab/nsp2613I613del2ATc--c44AY.250.000024
ORF1ab/nsp2613I613VAtcGtc44AY.250.000024
ORF1ab/nsp2613I613VAtcGtc44AY.360.000593
ORF1ab/nsp2613I613IatCatT44AY.4.2.10.000596
ORF1ab/nsp2613I613IatCatT44B.1.1.10.001307
ORF1ab/nsp2613I613IatCatT44B.1.1.1530.004381
ORF1ab/nsp2613I613IatCatT44B.1.1.2940.005063
ORF1ab/nsp2613I613IatCatT44B.1.1.4290.018433
ORF1ab/nsp2613I613LAtcCtc44B.1.1.5190.000159
ORF1ab/nsp2613I613del1Atc-tc34B.1.1.70.000003
ORF1ab/nsp2613I613del1ATc-Cc14B.1.1.70.000001
ORF1ab/nsp2613I613IatCatT44B.1.4870.078431
ORF1ab/nsp2613I613IatCatT44B.1.4970.001259
ORF1ab/nsp2613I613VAtcGtc33AY.1100.000338
ORF1ab/nsp2613I613IatCatT33AY.1180.000188
ORF1ab/nsp2613I613IatCatT33AY.270.000194
ORF1ab/nsp2613I613IatCatT33AY.450.000365
ORF1ab/nsp2613I613LAtcCtc33AY.50.000062
ORF1ab/nsp2613I613IatCatT23AY.520.001629
ORF1ab/nsp2613I613IatCatA13AY.520.000814
ORF1ab/nsp2613I613IatCatT33AY.60.000123
ORF1ab/nsp2613I613IatCatT33B.1.1.1760.001318
ORF1ab/nsp2613I613IatCatT33B.1.1.2220.000612
ORF1ab/nsp2613I613IatCatT33B.1.1.280.000934
ORF1ab/nsp2613I613IatCatT33B.1.1.2840.000322
ORF1ab/nsp2613I613delATC---33B.1.1.330.001263
ORF1ab/nsp2613I613delATC---33B.1.1.3480.002389
ORF1ab/nsp2613I613IatCatT33B.1.1.3780.021898
ORF1ab/nsp2613I613IatCatA33B.1.1.5260.010638
ORF1ab/nsp2613I613IatCatT33B.1.177.330.004934
ORF1ab/nsp2613I613IatCatT33B.1.177.560.002003
ORF1ab/nsp2613I613IatCatT33B.1.177.860.00055
ORF1ab/nsp2613I613IatCatT33B.1.2390.003663
ORF1ab/nsp2613I613IatCatT33B.1.2400.000647
ORF1ab/nsp2613I613IatCatT23B.1.258.140.001961
ORF1ab/nsp2613I613IatCatA13B.1.258.140.00098
ORF1ab/nsp2613I613VAtcGtc33B.1.3510.000089
ORF1ab/nsp2613I613delATC---33B.1.4290.000071
ORF1ab/nsp2613I613VAtcGtc33B.1.5680.003333
ORF1ab/nsp2613I613IatCatT33B.1.5750.00091
ORF1ab/nsp2613I613IatCatT23B.1.6230.001073
ORF1ab/nsp2613I613IatCatA13B.1.6230.000536
ORF1ab/nsp2613I613IatCatT33C.1.20.012766
ORF1ab/nsp2613I613IatCatT33P.1.120.001452
ORF1ab/nsp2613I613VAtcGtc33P.1.150.000697
ORF1ab/nsp2613I613IatCatT33P.1.170.000485
ORF1ab/nsp2613I613TaTcaCc220.111111
ORF1ab/nsp2613I613GATCGGA12All0
ORF1ab/nsp2613I613GATCGGT12All0
ORF1ab/nsp2613I613IatCatT22AY.1010.000981
ORF1ab/nsp2613I613IatCatT22AY.1100.000225
ORF1ab/nsp2613I613IatCatT12AY.160.00038
ORF1ab/nsp2613I613IatCatA12AY.160.00038
ORF1ab/nsp2613I613FAtcTtc22AY.250.000012
ORF1ab/nsp2613I613LAtcCtc22AY.30.00002
ORF1ab/nsp2613I613IatCatA22AY.300.000791
ORF1ab/nsp2613I613IatCatT22AY.320.001065
ORF1ab/nsp2613I613FAtcTtc22AY.330.000134
ORF1ab/nsp2613I613VAtcGtc22AY.390.000049
ORF1ab/nsp2613I613delATC---22AY.40.000003
ORF1ab/nsp2613I613VAtcGtc22AY.4.20.000043
ORF1ab/nsp2613I613IatCatT22AY.4.50.000215
ORF1ab/nsp2613I613IatCatA12AY.460.000104
ORF1ab/nsp2613I613IatCatT12AY.460.000104
ORF1ab/nsp2613I613VAtcGtc22AY.470.000062
ORF1ab/nsp2613I613IatCatT22AY.5.30.000675
ORF1ab/nsp2613I613IatCatT22AY.540.000191
ORF1ab/nsp2613I613IatCatA12AY.710.000475
ORF1ab/nsp2613I613IatCatT12AY.710.000475
ORF1ab/nsp2613I613IatCatT22AY.730.001331
ORF1ab/nsp2613I613IatCatT22AY.75.10.000361
ORF1ab/nsp2613I613IatCatT22AY.80.001212
ORF1ab/nsp2613I613FAtcTtc22AY.850.000854
ORF1ab/nsp2613I613IatCatT12AY.90.000068
ORF1ab/nsp2613I613IatCatA12AY.90.000068
ORF1ab/nsp2613I613IatCatT22AY.9.10.000167
ORF1ab/nsp2613I613IatCatT22AY.930.000546
ORF1ab/nsp2613I613IatCatT22AY.980.000158
ORF1ab/nsp2613I613VAtcGtc22B.10.000018
ORF1ab/nsp2613I613FAtcTtc22B.1.10.000036
ORF1ab/nsp2613I613IatCatA22B.1.1.1600.047619
ORF1ab/nsp2613I613IatCatT22B.1.1.2160.001781
ORF1ab/nsp2613I613VAtcGtc22B.1.1.2650.006309
ORF1ab/nsp2613I613VAtcGtc22B.1.1.280.000622
ORF1ab/nsp2613I613IatCatT22B.1.1.3050.007722
ORF1ab/nsp2613I613IatCatT22B.1.1.3060.000877
ORF1ab/nsp2613I613delATC---22B.1.1.3150.016949
ORF1ab/nsp2613I613IatCatT22B.1.1.3260.003521
ORF1ab/nsp2613I613IatCatT22B.1.1.330.000842
ORF1ab/nsp2613I613IatCatT22B.1.1.3470.036364
ORF1ab/nsp2613I613delATC---22B.1.1.460.008734
ORF1ab/nsp2613I613FAtcTtc22B.1.1.70.000002
ORF1ab/nsp2613I613GATCGGT12B.1.1.70.000001
ORF1ab/nsp2613I613GATCGGA12B.1.1.70.000001
ORF1ab/nsp2613I613VAtcGtc22B.1.1.700.000682
ORF1ab/nsp2613I613LAtcCtc22B.1.1600.000062
ORF1ab/nsp2613I613IatCatT22B.1.177.200.003035
ORF1ab/nsp2613I613VAtcGtc22B.1.2210.000142
ORF1ab/nsp2613I613IatCatT22B.1.2360.004107
ORF1ab/nsp2613I613VAtcGtc22B.1.351.20.000605
ORF1ab/nsp2613I613IatCatT22B.1.351.50.001199
ORF1ab/nsp2613I613VAtcGtc22B.1.36.10.002281
ORF1ab/nsp2613I613IatCatT22B.1.36.380.003284
ORF1ab/nsp2613I613IatCatT22B.1.4000.000858
ORF1ab/nsp2613I613delATC---22B.1.4240.016129
ORF1ab/nsp2613I613VAtcGtc22B.1.4270.000101
ORF1ab/nsp2613I613delATC---22B.1.5260.000047
ORF1ab/nsp2613I613VAtcGtc22B.1.5260.000047
ORF1ab/nsp2613I613IatCatT22B.1.5950.000522
ORF1ab/nsp2613I613VAtcGtc22B.1.5960.000174
ORF1ab/nsp2613I613LAtcCtc22B.1.617.20.000008
ORF1ab/nsp2613I613delATC---22B.1.617.20.000008
ORF1ab/nsp2613I613delATC---22B.1.6210.000177
ORF1ab/nsp2613I613VAtcGtc22B.1.6210.000177
ORF1ab/nsp2613I613IatCatT22B.60.00182
ORF1ab/nsp2613I613IatCatT22D.20.00015
ORF1ab/nsp2613I613IatCatT22N.40.008511
ORF1ab/nsp2613I613delATC---22N.60.014184
ORF1ab/nsp2613I613delATC---22P.10.000032
ORF1ab/nsp2613I613delATC---22P.1.150.000465
ORF1ab/nsp2613I613IatCatT22P.1.150.000465
ORF1ab/nsp2613I613IatCatT22P.1.20.002312
ORF1ab/nsp2613I613IatCatT22Q.20.001227
ORF1ab/nsp2613I613IatCatT22Q.40.00091
ORF1ab/nsp2613I613IatCatA11A0.000387
ORF1ab/nsp2613I613IatCatT11A.23.10.000704
ORF1ab/nsp2613I613IatCatT11A.270.001656
ORF1ab/nsp2613I613IatCatT11AA.20.007692
ORF1ab/nsp2613I613IatCatT11AE.80.000489
ORF1ab/nsp2613I613VAtcGtc11AE.80.000489
ORF1ab/nsp2613I613CATcTGc11All0
ORF1ab/nsp2613I613RaTCaGA11All0
ORF1ab/nsp2613I613NaTcaAc11All0
ORF1ab/nsp2613I613MatCatG11AY.1030.000006
ORF1ab/nsp2613I613delATC---11AY.1030.000006
ORF1ab/nsp2613I613IatCatT11AY.1040.001984
ORF1ab/nsp2613I613delATC---11AY.1080.001103
ORF1ab/nsp2613I613VAtcGtc11AY.116.10.000311
ORF1ab/nsp2613I613VAtcGtc11AY.1170.000085
ORF1ab/nsp2613I613VAtcGtc11AY.1190.000035
ORF1ab/nsp2613I613VAtcGtc11AY.130.000161
ORF1ab/nsp2613I613VAtcGtc11AY.140.000088
ORF1ab/nsp2613I613VAtcGtc11AY.16.10.00047
ORF1ab/nsp2613I613delATC---11AY.190.00114
ORF1ab/nsp2613I613VAtcGtc11AY.230.00007
ORF1ab/nsp2613I613IatCatT11AY.230.00007
ORF1ab/nsp2613I613IatCatT11AY.240.000431
ORF1ab/nsp2613I613del1Atc-tc11AY.250.000006
ORF1ab/nsp2613I613SaTcaGc11AY.250.000006
ORF1ab/nsp2613I613IatCatT11AY.280.00189
ORF1ab/nsp2613I613LAtcCtc11AY.290.000016
ORF1ab/nsp2613I613delATC---11AY.30.00001
ORF1ab/nsp2613I613IatCatT11AY.34.10.00051
ORF1ab/nsp2613I613IatCatT11AY.370.000316
ORF1ab/nsp2613I613VAtcGtc11AY.39.10.00004
ORF1ab/nsp2613I613MatCatG11AY.40.000002
ORF1ab/nsp2613I613LAtcCtc11AY.40.000002
ORF1ab/nsp2613I613TaTcaCc11AY.40.000002
ORF1ab/nsp2613I613delATC---11AY.4.50.000107
ORF1ab/nsp2613I613delATC---11AY.400.000964
ORF1ab/nsp2613I613del2ATc--c11AY.430.000004
ORF1ab/nsp2613I613TaTcaCc11AY.440.000006
ORF1ab/nsp2613I613VAtcGtc11AY.450.000122
ORF1ab/nsp2613I613VAtcGtc11AY.460.000104
ORF1ab/nsp2613I613IatCatA11AY.46.20.000635
ORF1ab/nsp2613I613IatCatT11AY.46.40.000165
ORF1ab/nsp2613I613IatCatT11AY.46.50.000198
ORF1ab/nsp2613I613VAtcGtc11AY.46.60.000072
ORF1ab/nsp2613I613IatCatT11AY.46.60.000072
ORF1ab/nsp2613I613VAtcGtc11AY.5.30.000337
ORF1ab/nsp2613I613VAtcGtc11AY.540.000095
ORF1ab/nsp2613I613IatCatT11AY.550.000917
ORF1ab/nsp2613I613VAtcGtc11AY.550.000917
ORF1ab/nsp2613I613VAtcGtc11AY.590.00053
ORF1ab/nsp2613I613delATC---11AY.60.000041
ORF1ab/nsp2613I613VAtcGtc11AY.620.000436
ORF1ab/nsp2613I613IatCatT11AY.660.00107
ORF1ab/nsp2613I613delATC---11AY.680.000274
ORF1ab/nsp2613I613SaTcaGc11AY.680.000274
ORF1ab/nsp2613I613VAtcGtc11AY.7.10.000113
ORF1ab/nsp2613I613IatCatT11AY.700.000209
ORF1ab/nsp2613I613delATC---11AY.730.000665
ORF1ab/nsp2613I613VAtcGtc11AY.740.000116
ORF1ab/nsp2613I613FAtcTtc11AY.750.000056
ORF1ab/nsp2613I613delATC---11AY.75.10.00018
ORF1ab/nsp2613I613VAtcGtc11AY.75.10.00018
ORF1ab/nsp2613I613IatCatT11AY.830.001724
ORF1ab/nsp2613I613MatCatG11AY.850.000427
ORF1ab/nsp2613I613IatCatA11AY.890.004902
ORF1ab/nsp2613I613MatCatG11AY.9.20.000037
ORF1ab/nsp2613I613IatCatT11AY.910.00073
ORF1ab/nsp2613I613VAtcGtc11AY.950.000761
ORF1ab/nsp2613I613LAtcCtc11AY.980.000079
ORF1ab/nsp2613I613VAtcGtc11AY.98.10.000048
ORF1ab/nsp2613I613delATC---11AY.98.10.000048
ORF1ab/nsp2613I613VAtcGtc11AY.99.20.000092
ORF1ab/nsp2613I613IatCatA11B0.000128
ORF1ab/nsp2613I613SaTcaGc11B.10.000009
ORF1ab/nsp2613I613SaTcaGc11B.1.10.000018
ORF1ab/nsp2613I613CATcTGc11B.1.10.000018
ORF1ab/nsp2613I613VAtcGtc11B.1.1.1170.009709
ORF1ab/nsp2613I613IatCatT11B.1.1.1380.006061
ORF1ab/nsp2613I613delATC---11B.1.1.1390.022727
ORF1ab/nsp2613I613IatCatT11B.1.1.1860.003436
ORF1ab/nsp2613I613IatCatT11B.1.1.1890.001513
ORF1ab/nsp2613I613VAtcGtc11B.1.1.2160.00089
ORF1ab/nsp2613I613LAtcCtc11B.1.1.2220.000204
ORF1ab/nsp2613I613IatCatT11B.1.1.2770.000759
ORF1ab/nsp2613I613VAtcGtc11B.1.1.2800.003086
ORF1ab/nsp2613I613IatCatT11B.1.1.3010.001179
ORF1ab/nsp2613I613IatCatT11B.1.1.3170.000412
ORF1ab/nsp2613I613VAtcGtc11B.1.1.330.000421
ORF1ab/nsp2613I613VAtcGtc11B.1.1.3370.003597
ORF1ab/nsp2613I613IatCatT11B.1.1.3370.003597
ORF1ab/nsp2613I613IatCatT11B.1.1.370.000193
ORF1ab/nsp2613I613IatCatT11B.1.1.3770.001381
ORF1ab/nsp2613I613IatCatT11B.1.1.3970.002252
ORF1ab/nsp2613I613IatCatT11B.1.1.4130.006897
ORF1ab/nsp2613I613delATC---11B.1.1.4160.000905
ORF1ab/nsp2613I613VAtcGtc11B.1.1.4160.000905
ORF1ab/nsp2613I613IatCatT11B.1.1.4200.001006
ORF1ab/nsp2613I613IatCatT11B.1.1.4320.001266
ORF1ab/nsp2613I613IatCatT11B.1.1.4340.000349
ORF1ab/nsp2613I613delATC---11B.1.1.4480.002033
ORF1ab/nsp2613I613IatCatT11B.1.1.4850.016667
ORF1ab/nsp2613I613delATC---11B.1.1.5170.006803
ORF1ab/nsp2613I613IatCatT11B.1.1.5250.005464
ORF1ab/nsp2613I613VAtcGtc11B.1.1.590.006494
ORF1ab/nsp2613I613del2ATc--c11B.1.1.70.000001
ORF1ab/nsp2613I613SaTCaGT11B.1.1.70.000001
ORF1ab/nsp2613I613RaTCaGA11B.1.1.70.000001
ORF1ab/nsp2613I613delATC---11B.1.1.700.000341
ORF1ab/nsp2613I613IatCatT11B.1.1180.006711
ORF1ab/nsp2613I613delATC---11B.1.1400.018868
ORF1ab/nsp2613I613IatCatT11B.1.1580.02381
ORF1ab/nsp2613I613delATC---11B.1.1600.000031
ORF1ab/nsp2613I613VAtcGtc11B.1.160.140.002119
ORF1ab/nsp2613I613LAtcCtc11B.1.1610.017241
ORF1ab/nsp2613I613IatCatT11B.1.177.120.000152
ORF1ab/nsp2613I613IatCatT11B.1.177.150.000631
ORF1ab/nsp2613I613VAtCGtT11B.1.177.210.000076
ORF1ab/nsp2613I613IatCatT11B.1.177.210.000076
ORF1ab/nsp2613I613IatCatT11B.1.177.230.003236
ORF1ab/nsp2613I613IatCatA11B.1.177.40.000211
ORF1ab/nsp2613I613IatCatT11B.1.177.420.000894
ORF1ab/nsp2613I613IatCatA11B.1.177.440.000519
ORF1ab/nsp2613I613IatCatT11B.1.177.570.000281
ORF1ab/nsp2613I613delATC---11B.1.177.620.001192
ORF1ab/nsp2613I613IatCatT11B.1.177.720.00339
ORF1ab/nsp2613I613IatCatT11B.1.177.770.000726
ORF1ab/nsp2613I613IatCatT11B.1.177.810.000189
ORF1ab/nsp2613I613delATC---11B.1.177.830.001481
ORF1ab/nsp2613I613IatCatT11B.1.1820.007246
ORF1ab/nsp2613I613IatCatT11B.1.1950.005025
ORF1ab/nsp2613I613delATC---11B.1.20.000009
ORF1ab/nsp2613I613LAtcCtc11B.1.20.000009
ORF1ab/nsp2613I613SaTcaGc11B.1.20.000009
ORF1ab/nsp2613I613NaTcaAc11B.1.20.000009
ORF1ab/nsp2613I613VAtcGtc11B.1.2060.000816
ORF1ab/nsp2613I613VAtcGtc11B.1.214.20.0006
ORF1ab/nsp2613I613IatCatA11B.1.2220.001692
ORF1ab/nsp2613I613IatCatT11B.1.2320.000537
ORF1ab/nsp2613I613IatCatT11B.1.2340.000132
ORF1ab/nsp2613I613VAtcGtc11B.1.2430.00007
ORF1ab/nsp2613I613IatCatT11B.1.258.70.001912
ORF1ab/nsp2613I613IatCatT11B.1.2670.018519
ORF1ab/nsp2613I613IatCatT11B.1.2790.000514
ORF1ab/nsp2613I613IatCatA11B.1.3010.005917
ORF1ab/nsp2613I613VAtcGtc11B.1.3150.006061
ORF1ab/nsp2613I613IatCatT11B.1.3460.001311
ORF1ab/nsp2613I613delATC---11B.1.3510.00003
ORF1ab/nsp2613I613IatCatT11B.1.36.10.00114
ORF1ab/nsp2613I613IatCatT11B.1.36.100.004785
ORF1ab/nsp2613I613TaTcaCc11B.1.36.290.000517
ORF1ab/nsp2613I613IatCatT11B.1.36.290.000517
ORF1ab/nsp2613I613IatCatT11B.1.36.360.000602
ORF1ab/nsp2613I613IatCatA11B.1.36.70.004
ORF1ab/nsp2613I613delATC---11B.1.4040.001302
ORF1ab/nsp2613I613IatCatT11B.1.4090.000781
ORF1ab/nsp2613I613delATC---11B.1.4270.00005
ORF1ab/nsp2613I613TaTcaCc11B.1.4270.00005
ORF1ab/nsp2613I613IatCatT11B.1.4280.00102
ORF1ab/nsp2613I613TaTcaCc11B.1.4290.000024
ORF1ab/nsp2613I613VAtcGtc11B.1.4290.000024
ORF1ab/nsp2613I613IatCatT11B.1.4660.023256
ORF1ab/nsp2613I613IatCatT11B.1.4700.001404
ORF1ab/nsp2613I613SaTcaGc11B.1.4970.000315
ORF1ab/nsp2613I613IatCatA11B.1.5240.001406
ORF1ab/nsp2613I613delATC---11B.1.5610.000397
ORF1ab/nsp2613I613IatCatT11B.1.5640.000426
ORF1ab/nsp2613I613IatCatA11B.1.5650.00081
ORF1ab/nsp2613I613VAtcGtc11B.1.5770.000687
ORF1ab/nsp2613I613IatCatT11B.1.5820.000491
ORF1ab/nsp2613I613IatCatA11B.1.6100.003546
ORF1ab/nsp2613I613delATC---11B.1.617.10.000129
ORF1ab/nsp2613I613TaTcaCc11B.1.617.20.000004
ORF1ab/nsp2613I613FAtcTtc11B.1.617.20.000004
ORF1ab/nsp2613I613SATCTCT11B.1.617.20.000004
ORF1ab/nsp2613I613delATC---11B.1.617.30.002985
ORF1ab/nsp2613I613IatCatT11B.1.619.10.000641
ORF1ab/nsp2613I613IatCatT11B.1.621.10.000506
ORF1ab/nsp2613I613delATC---11B.1.621.10.000506
ORF1ab/nsp2613I613IatCatT11B.1.9.50.005682
ORF1ab/nsp2613I613VAtcGtc11B.4.70.010101
ORF1ab/nsp2613I613delATC---11B.570.015152
ORF1ab/nsp2613I613VAtcGtc11B.6.60.000889
ORF1ab/nsp2613I613delATC---11B.610.005747
ORF1ab/nsp2613I613IatCatT11C.140.004329
ORF1ab/nsp2613I613del1Atc-tc11P.10.000016
ORF1ab/nsp2613I613IatCatT11P.1.100.000269
ORF1ab/nsp2613I613VAtcGtc11P.1.120.000484
ORF1ab/nsp2613I613IatCatT11P.1.160.000374
ORF1ab/nsp2613I613delATC---11Q.10.000126
ORF1ab/nsp2613I613VAtcGtc11Q.10.000126
ORF1ab/nsp2613I613del1Atc-tc11Q.20.000613
ORF1ab/nsp2613I613delATC---11Q.80.000165
ORF1ab/nsp2613I613delATC---11R.10.00009
ORF1ab/nsp2613I613IatCatT11Z.10.00289