CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 585

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2585P585PP765PsynccAccG984797200.9871032558-2560
ORF1ab/nsp2585P585PP765PsynccAccT9847740.007514982558-2560
ORF1ab/nsp2585P585PP765PsynccAccC9847530.005382352558-2560
ORF1ab/nsp2585P585SP765SnonsynCcaTca321732150.9993782558-2560
ORF1ab/nsp2585P585SP765SnonsynCcATcG321720.0006216972558-2560
ORF1ab/nsp2585P585LP765LnonsyncCacTa1731710.9884392558-2560
ORF1ab/nsp2585P585LP765LnonsynCCaTTa17320.01156072558-2560
ORF1ab/nsp2585P585delP765deldelCCA---707012558-2560
ORF1ab/nsp2585P585AP765AnonsynCcaGca8812558-2560
ORF1ab/nsp2585P585TP765TnonsynCcaAca7712558-2560
ORF1ab/nsp2585P585QP765QnonsyncCacAa4412558-2560
ORF1ab/nsp2585P585FP765FnonsynCCATTC420.52558-2560
ORF1ab/nsp2585P585FP765FnonsynCCATTT420.52558-2560
ORF1ab/nsp2585P585KP765KnonsynCCaAAa2212558-2560
ORF1ab/nsp2585P585del2P765del2delcCAc--210.52558-2560
ORF1ab/nsp2585P585del2P765del2delCCa--a210.52558-2560
ORF1ab/nsp2585P585IP765InonsynCCaATa1112558-2560
ORF1ab/nsp2585P585del1P765del1delCca-ca1112558-2560
ORF1ab/nsp2585P585RP765RnonsyncCacGa1112558-2560

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2585P585PccAccG97209847All0.001859
ORF1ab/nsp2585P585PccAccT749847All0.000014
ORF1ab/nsp2585P585PccAccC539847All0.00001
ORF1ab/nsp2585P585PccAccG48114822B.1.617.20.018115
ORF1ab/nsp2585P585PccAccT104822B.1.617.20.000038
ORF1ab/nsp2585P585PccAccC14822B.1.617.20.000004
ORF1ab/nsp2585P585SCcaTca32153217All0.000615
ORF1ab/nsp2585P585SCcATcG23217All0
ORF1ab/nsp2585P585PccAccG31653167AY.430.014022
ORF1ab/nsp2585P585PccAccC23167AY.430.000009
ORF1ab/nsp2585P585SCcaTca26952695B.400.981785
ORF1ab/nsp2585P585PccAccG302302AY.440.001838
ORF1ab/nsp2585P585PccAccG298299AY.390.007364
ORF1ab/nsp2585P585PccAccT1299AY.390.000025
ORF1ab/nsp2585P585SCcaTca174174B.611
ORF1ab/nsp2585P585LcCacTa171173All0.000033
ORF1ab/nsp2585P585LCCaTTa2173All0
ORF1ab/nsp2585P585PccAccG165165AY.1030.001024
ORF1ab/nsp2585P585PccAccG127138AY.1190.004484
ORF1ab/nsp2585P585PccAccC10138AY.1190.000353
ORF1ab/nsp2585P585PccAccT1138AY.1190.000035
ORF1ab/nsp2585P585PccAccG9191AY.230.006347
ORF1ab/nsp2585P585delCCA---7070All0.000013
ORF1ab/nsp2585P585PccAccG6667AY.40.000103
ORF1ab/nsp2585P585PccAccC167AY.40.000002
ORF1ab/nsp2585P585PccAccG6767AY.460.006973
ORF1ab/nsp2585P585SCcaTca6161B.600.968254
ORF1ab/nsp2585P585PccAccG5555AY.250.000331
ORF1ab/nsp2585P585PccAccG2655B.1.1.70.000023
ORF1ab/nsp2585P585PccAccT1955B.1.1.70.000017
ORF1ab/nsp2585P585PccAccC1055B.1.1.70.000009
ORF1ab/nsp2585P585PccAccG3540AY.1020.000928
ORF1ab/nsp2585P585PccAccT540AY.1020.000133
ORF1ab/nsp2585P585SCcaTca3636B0.004601
ORF1ab/nsp2585P585PccAccG3434AY.450.004137
ORF1ab/nsp2585P585PccAccG3032AY.1170.002535
ORF1ab/nsp2585P585PccAccT232AY.1170.000169
ORF1ab/nsp2585P585PccAccG3131AY.50.00064
ORF1ab/nsp2585P585SCcaTca3131B.1.1.70.000028
ORF1ab/nsp2585P585SCcaTca2727AY.440.000164
ORF1ab/nsp2585P585PccAccG2626AY.5.40.007194
ORF1ab/nsp2585P585PccAccC2525AY.360.003705
ORF1ab/nsp2585P585PccAccG2525AY.840.010936
ORF1ab/nsp2585P585SCcaTca2323B.10.000211
ORF1ab/nsp2585P585SCcaTca2222AY.40.000034
ORF1ab/nsp2585P585PccAccG2020AY.860.016598
ORF1ab/nsp2585P585PccAccG1818AY.950.013699
ORF1ab/nsp2585P585delCCA---1717B.1.1.70.000015
ORF1ab/nsp2585P585LcCacTa1616B.1.1.70.000014
ORF1ab/nsp2585P585LcCacTa1616B.1.20.000141
ORF1ab/nsp2585P585PccAccG1515AY.1160.004302
ORF1ab/nsp2585P585PccAccG1415B.1.1770.000184
ORF1ab/nsp2585P585PccAccT115B.1.1770.000013
ORF1ab/nsp2585P585SCcaTca1414B.1.20.000123
ORF1ab/nsp2585P585PccAccG1214B.1.20.000106
ORF1ab/nsp2585P585PccAccT214B.1.20.000018
ORF1ab/nsp2585P585PccAccG1313AY.1180.000814
ORF1ab/nsp2585P585LcCacTa1313AY.1190.000459
ORF1ab/nsp2585P585PccAccT1213AY.350.002797
ORF1ab/nsp2585P585PccAccG113AY.350.000233
ORF1ab/nsp2585P585PccAccG1212AY.46.10.01232
ORF1ab/nsp2585P585PccAccG1212AY.5.30.004049
ORF1ab/nsp2585P585PccAccG1212B.10.00011
ORF1ab/nsp2585P585SCcaTca1212B.1.10.000218
ORF1ab/nsp2585P585SCcaTca1111AY.250.000066
ORF1ab/nsp2585P585PccAccG1111AY.330.000735
ORF1ab/nsp2585P585LcCacTa1111B.1.4260.0111
ORF1ab/nsp2585P585LcCacTa1010AY.260.000283
ORF1ab/nsp2585P585PccAccG1010AY.680.002737
ORF1ab/nsp2585P585PccAccG1010AY.750.00056
ORF1ab/nsp2585P585LcCacTa1010B.1.617.20.000038
ORF1ab/nsp2585P585ACcaGca88All0.000002
ORF1ab/nsp2585P585LcCacTa88AY.40.000012
ORF1ab/nsp2585P585PccAccG88AY.920.002298
ORF1ab/nsp2585P585PccAccG68B.1.10.000109
ORF1ab/nsp2585P585PccAccC28B.1.10.000036
ORF1ab/nsp2585P585SCcaTca68B.1.617.20.000023
ORF1ab/nsp2585P585SCcATcG28B.1.617.20.000008
ORF1ab/nsp2585P585TCcaAca77All0.000001
ORF1ab/nsp2585P585PccAccG77AY.1210.000947
ORF1ab/nsp2585P585PccAccT37AY.260.000085
ORF1ab/nsp2585P585PccAccG37AY.260.000085
ORF1ab/nsp2585P585PccAccC17AY.260.000028
ORF1ab/nsp2585P585PccAccT47AY.290.000063
ORF1ab/nsp2585P585PccAccG37AY.290.000047
ORF1ab/nsp2585P585LcCacTa77AY.440.000043
ORF1ab/nsp2585P585PccAccG77AY.780.010786
ORF1ab/nsp2585P585PccAccG66AY.1010.002943
ORF1ab/nsp2585P585SCcaTca66AY.1030.000037
ORF1ab/nsp2585P585PccAccG66AY.1050.003859
ORF1ab/nsp2585P585PccAccG66AY.1110.001099
ORF1ab/nsp2585P585PccAccG66AY.670.002786
ORF1ab/nsp2585P585PccAccG66AY.9.20.00022
ORF1ab/nsp2585P585PccAccG66AY.990.006296
ORF1ab/nsp2585P585delCCA---66B.10.000055
ORF1ab/nsp2585P585PccAccG66B.1.1.3690.002677
ORF1ab/nsp2585P585SCcaTca55AY.1000.00023
ORF1ab/nsp2585P585PccAccG55AY.1090.003698
ORF1ab/nsp2585P585PccAccG55AY.410.00147
ORF1ab/nsp2585P585LcCacTa55AY.430.000022
ORF1ab/nsp2585P585PccAccG55AY.560.008026
ORF1ab/nsp2585P585PccAccG55AY.580.004537
ORF1ab/nsp2585P585PccAccG55AY.75.10.000902
ORF1ab/nsp2585P585LcCacTa55B.1.1770.000066
ORF1ab/nsp2585P585SCcaTca55P.1.150.001162
ORF1ab/nsp2585P585delCCA---440.222222
ORF1ab/nsp2585P585QcCacAa44All0.000001
ORF1ab/nsp2585P585FCCATTC24All0
ORF1ab/nsp2585P585FCCATTT24All0
ORF1ab/nsp2585P585PccAccG34AY.1000.000138
ORF1ab/nsp2585P585PccAccT14AY.1000.000046
ORF1ab/nsp2585P585PccAccG44AY.1080.00441
ORF1ab/nsp2585P585PccAccG44AY.1200.000149
ORF1ab/nsp2585P585PccAccG44AY.190.004561
ORF1ab/nsp2585P585LcCacTa44AY.30.00004
ORF1ab/nsp2585P585SCcaTca44AY.46.60.000289
ORF1ab/nsp2585P585SCcaTca44B.1.1.100.004459
ORF1ab/nsp2585P585SCcaTca44B.1.1770.000053
ORF1ab/nsp2585P585LcCacTa44B.1.2580.000266
ORF1ab/nsp2585P585PccAccG33AY.100.00159
ORF1ab/nsp2585P585PccAccG23AY.1100.000225
ORF1ab/nsp2585P585PccAccT13AY.1100.000113
ORF1ab/nsp2585P585SCcaTca33AY.200.000117
ORF1ab/nsp2585P585LcCacTa33AY.250.000018
ORF1ab/nsp2585P585PccAccG33AY.300.001187
ORF1ab/nsp2585P585SCcaTca33AY.320.001597
ORF1ab/nsp2585P585PccAccG33AY.34.10.00153
ORF1ab/nsp2585P585delCCA---33AY.40.000005
ORF1ab/nsp2585P585LcCacTa33AY.4.20.000065
ORF1ab/nsp2585P585PccAccG33AY.420.000121
ORF1ab/nsp2585P585PccAccG33AY.520.002443
ORF1ab/nsp2585P585PccAccG23AY.620.000871
ORF1ab/nsp2585P585PccAccT13AY.620.000436
ORF1ab/nsp2585P585SCcaTca33AY.750.000168
ORF1ab/nsp2585P585PccAccG33AY.820.004071
ORF1ab/nsp2585P585PccAccG33AY.910.002191
ORF1ab/nsp2585P585PccAccG33AY.940.001328
ORF1ab/nsp2585P585LcCacTa33AY.98.10.000145
ORF1ab/nsp2585P585PccAccG33B0.000383
ORF1ab/nsp2585P585LcCacTa33B.10.000027
ORF1ab/nsp2585P585delCCA---33B.1.10.000054
ORF1ab/nsp2585P585delCCA---33B.1.1.330.001263
ORF1ab/nsp2585P585LcCacTa33B.1.1600.000094
ORF1ab/nsp2585P585SCcaTca33B.1.177.40.000633
ORF1ab/nsp2585P585SCcaTca33B.1.3610.003866
ORF1ab/nsp2585P585PccAccG33B.1.4090.002344
ORF1ab/nsp2585P585PccAccG23B.1.4290.000047
ORF1ab/nsp2585P585PccAccT13B.1.4290.000024
ORF1ab/nsp2585P585SCcaTca33B.1.5260.000071
ORF1ab/nsp2585P585LcCacTa33D.20.000225
ORF1ab/nsp2585P585delCCA---33P.10.000047
ORF1ab/nsp2585P585PccAccT23P.1.140.000096
ORF1ab/nsp2585P585PccAccC13P.1.140.000048
ORF1ab/nsp2585P585FCCATTC220.111111
ORF1ab/nsp2585P585KCCaAAa220.111111
ORF1ab/nsp2585P585KCCaAAa22All0
ORF1ab/nsp2585P585del2CCa--a12All0
ORF1ab/nsp2585P585del2cCAc--12All0
ORF1ab/nsp2585P585LcCacTa22AY.10.000791
ORF1ab/nsp2585P585SCcaTca22AY.1020.000053
ORF1ab/nsp2585P585PccAccG22AY.1140.000462
ORF1ab/nsp2585P585PccAccG22AY.16.10.00094
ORF1ab/nsp2585P585PccAccG22AY.20.000712
ORF1ab/nsp2585P585PccAccG22AY.200.000078
ORF1ab/nsp2585P585PccAccG22AY.320.001065
ORF1ab/nsp2585P585SCcaTca22AY.4.20.000043
ORF1ab/nsp2585P585PccAccG22AY.46.60.000144
ORF1ab/nsp2585P585PccAccG22AY.470.000062
ORF1ab/nsp2585P585LcCacTa22AY.470.000062
ORF1ab/nsp2585P585SCcaTca22AY.50.000041
ORF1ab/nsp2585P585PccAccG22AY.530.000575
ORF1ab/nsp2585P585PccAccG22AY.540.000191
ORF1ab/nsp2585P585PccAccG22AY.590.001059
ORF1ab/nsp2585P585LcCacTa22AY.610.00021
ORF1ab/nsp2585P585PccAccG22AY.640.00119
ORF1ab/nsp2585P585PccAccG22AY.710.00095
ORF1ab/nsp2585P585PccAccG22AY.870.001665
ORF1ab/nsp2585P585PccAccG22AY.880.001768
ORF1ab/nsp2585P585SCcaTca22AY.980.000158
ORF1ab/nsp2585P585PccAccG22AY.980.000158
ORF1ab/nsp2585P585delCCA---22B.1.1.3480.001592
ORF1ab/nsp2585P585SCcaTca22B.1.1.3690.000892
ORF1ab/nsp2585P585LcCacTa22B.1.1.5190.000079
ORF1ab/nsp2585P585SCcaTca22B.1.1.5190.000079
ORF1ab/nsp2585P585ACcaGca22B.1.1.630.000772
ORF1ab/nsp2585P585ACcaGca22B.1.1600.000062
ORF1ab/nsp2585P585delCCA---22B.1.4240.016129
ORF1ab/nsp2585P585delCCA---22B.1.4290.000047
ORF1ab/nsp2585P585PccAccG22B.1.5260.000047
ORF1ab/nsp2585P585LcCacTa22B.1.5640.000852
ORF1ab/nsp2585P585SCcaTca22B.1.5870.003795
ORF1ab/nsp2585P585LcCacTa22B.1.617.10.000258
ORF1ab/nsp2585P585SCcaTca22B.30.001661
ORF1ab/nsp2585P585SCcaTca22B.40.004415
ORF1ab/nsp2585P585LCCaTTa22B.400.000729
ORF1ab/nsp2585P585SCcaTca22D.20.00015
ORF1ab/nsp2585P585PccAccT12D.20.000075
ORF1ab/nsp2585P585PccAccG12D.20.000075
ORF1ab/nsp2585P585delCCA---22N.60.014184
ORF1ab/nsp2585P585SCcaTca22P.10.000032
ORF1ab/nsp2585P585LcCacTa22P.1.160.000748
ORF1ab/nsp2585P585SCcaTca22R.10.00018
ORF1ab/nsp2585P585LcCacTa11A.10.000282
ORF1ab/nsp2585P585PccAccT11A.20.000662
ORF1ab/nsp2585P585PccAccG11A.270.001656
ORF1ab/nsp2585P585TCcaAca11AD.20.000219
ORF1ab/nsp2585P585RcCacGa11All0
ORF1ab/nsp2585P585ICCaATa11All0
ORF1ab/nsp2585P585del1Cca-ca11All0
ORF1ab/nsp2585P585LcCacTa11AY.1030.000006
ORF1ab/nsp2585P585TCcaAca11AY.1030.000006
ORF1ab/nsp2585P585delCCA---11AY.1030.000006
ORF1ab/nsp2585P585delCCA---11AY.1080.001103
ORF1ab/nsp2585P585delCCA---11AY.1110.000183
ORF1ab/nsp2585P585SCcaTca11AY.1130.000142
ORF1ab/nsp2585P585LcCacTa11AY.1160.000287
ORF1ab/nsp2585P585PccAccG11AY.120.000316
ORF1ab/nsp2585P585LcCacTa11AY.1200.000037
ORF1ab/nsp2585P585SCcaTca11AY.1200.000037
ORF1ab/nsp2585P585del1Cca-ca11AY.1200.000037
ORF1ab/nsp2585P585SCcaTca11AY.1210.000135
ORF1ab/nsp2585P585delCCA---11AY.190.00114
ORF1ab/nsp2585P585LcCacTa11AY.200.000039
ORF1ab/nsp2585P585LcCacTa11AY.230.00007
ORF1ab/nsp2585P585delCCA---11AY.250.000006
ORF1ab/nsp2585P585SCcaTca11AY.260.000028
ORF1ab/nsp2585P585delCCA---11AY.270.000065
ORF1ab/nsp2585P585PccAccG11AY.270.000065
ORF1ab/nsp2585P585TCcaAca11AY.290.000016
ORF1ab/nsp2585P585SCcaTca11AY.29.10.000221
ORF1ab/nsp2585P585PccAccG11AY.30.00001
ORF1ab/nsp2585P585SCcaTca11AY.30.00001
ORF1ab/nsp2585P585delCCA---11AY.30.00001
ORF1ab/nsp2585P585SCcaTca11AY.3.10.000085
ORF1ab/nsp2585P585PccAccG11AY.380.000499
ORF1ab/nsp2585P585SCcaTca11AY.390.000025
ORF1ab/nsp2585P585PccAccG11AY.39.10.00004
ORF1ab/nsp2585P585ICCaATa11AY.40.000002
ORF1ab/nsp2585P585PccAccG11AY.4.20.000022
ORF1ab/nsp2585P585PccAccG11AY.400.000964
ORF1ab/nsp2585P585LcCacTa11AY.420.00004
ORF1ab/nsp2585P585delCCA---11AY.420.00004
ORF1ab/nsp2585P585ACcaGca11AY.430.000004
ORF1ab/nsp2585P585SCcaTca11AY.430.000004
ORF1ab/nsp2585P585del2CCa--a11AY.440.000006
ORF1ab/nsp2585P585TCcaAca11AY.450.000122
ORF1ab/nsp2585P585PccAccG11AY.46.40.000165
ORF1ab/nsp2585P585SCcaTca11AY.46.50.000198
ORF1ab/nsp2585P585delCCA---11AY.470.000031
ORF1ab/nsp2585P585LcCacTa11AY.50.000021
ORF1ab/nsp2585P585FCCATTT11AY.550.000917
ORF1ab/nsp2585P585delCCA---11AY.60.000041
ORF1ab/nsp2585P585delCCA---11AY.610.000105
ORF1ab/nsp2585P585PccAccG11AY.610.000105
ORF1ab/nsp2585P585PccAccG11AY.70.000196
ORF1ab/nsp2585P585PccAccG11AY.730.000665
ORF1ab/nsp2585P585SCcaTca11AY.75.10.00018
ORF1ab/nsp2585P585LcCacTa11AY.840.000437
ORF1ab/nsp2585P585PccAccG11AY.890.004902
ORF1ab/nsp2585P585PccAccG11AY.90.000068
ORF1ab/nsp2585P585SCcaTca11AY.9.10.000084
ORF1ab/nsp2585P585LcCacTa11AY.9.20.000037
ORF1ab/nsp2585P585LcCacTa11AY.920.000287
ORF1ab/nsp2585P585SCcaTca11AY.960.002075
ORF1ab/nsp2585P585LcCacTa11AY.980.000079
ORF1ab/nsp2585P585PccAccT11AY.98.10.000048
ORF1ab/nsp2585P585PccAccG11AY.99.10.001553
ORF1ab/nsp2585P585SCcaTca11AY.99.20.000092
ORF1ab/nsp2585P585delCCA---11B0.000128
ORF1ab/nsp2585P585QcCacAa11B.10.000009
ORF1ab/nsp2585P585delCCA---11B.1.1.1390.022727
ORF1ab/nsp2585P585SCcaTca11B.1.1.1610.003534
ORF1ab/nsp2585P585delCCA---11B.1.1.2070.001182
ORF1ab/nsp2585P585SCcaTca11B.1.1.2140.000055
ORF1ab/nsp2585P585SCcaTca11B.1.1.2310.003096
ORF1ab/nsp2585P585SCcaTca11B.1.1.2840.000107
ORF1ab/nsp2585P585LcCacTa11B.1.1.3060.000438
ORF1ab/nsp2585P585SCcaTca11B.1.1.3170.000412
ORF1ab/nsp2585P585LcCacTa11B.1.1.3180.000302
ORF1ab/nsp2585P585SCcaTca11B.1.1.330.000421
ORF1ab/nsp2585P585PccAccG11B.1.1.3360.016667
ORF1ab/nsp2585P585delCCA---11B.1.1.4160.000905
ORF1ab/nsp2585P585delCCA---11B.1.1.4480.002033
ORF1ab/nsp2585P585SCcaTca11B.1.1.4860.001577
ORF1ab/nsp2585P585PccAccT11B.1.1.610.008772
ORF1ab/nsp2585P585RcCacGa11B.1.1.70.000001
ORF1ab/nsp2585P585del2cCAc--11B.1.1.70.000001
ORF1ab/nsp2585P585ACcaGca11B.1.1.70.000001
ORF1ab/nsp2585P585PccAccG11B.1.177.150.000631
ORF1ab/nsp2585P585SCcaTca11B.1.177.520.001757
ORF1ab/nsp2585P585LcCacTa11B.1.177.570.000281
ORF1ab/nsp2585P585SCcaTca11B.1.177.630.002703
ORF1ab/nsp2585P585PccAccG11B.1.177.730.000566
ORF1ab/nsp2585P585SCcaTca11B.1.177.810.000189
ORF1ab/nsp2585P585delCCA---11B.1.177.830.001481
ORF1ab/nsp2585P585LcCacTa11B.1.177.860.000183
ORF1ab/nsp2585P585QcCacAa11B.1.20.000009
ORF1ab/nsp2585P585LcCacTa11B.1.2210.000071
ORF1ab/nsp2585P585SCcaTca11B.1.221.40.004167
ORF1ab/nsp2585P585LcCacTa11B.1.2430.00007
ORF1ab/nsp2585P585SCcaTca11B.1.2430.00007
ORF1ab/nsp2585P585LcCacTa11B.1.258.110.000396
ORF1ab/nsp2585P585LcCacTa11B.1.258.170.000104
ORF1ab/nsp2585P585SCcaTca11B.1.258.170.000104
ORF1ab/nsp2585P585LcCacTa11B.1.3350.010309
ORF1ab/nsp2585P585SCcaTca11B.1.3440.008197
ORF1ab/nsp2585P585SCcaTca11B.1.350.008475
ORF1ab/nsp2585P585PccAccG11B.1.36.160.001425
ORF1ab/nsp2585P585delCCA---11B.1.36.180.00042
ORF1ab/nsp2585P585LcCacTa11B.1.4270.00005
ORF1ab/nsp2585P585LcCacTa11B.1.4290.000024
ORF1ab/nsp2585P585SCcaTca11B.1.4290.000024
ORF1ab/nsp2585P585TCcaAca11B.1.4290.000024
ORF1ab/nsp2585P585TCcaAca11B.1.4530.003236
ORF1ab/nsp2585P585LcCacTa11B.1.466.20.000391
ORF1ab/nsp2585P585PccAccG11B.1.4700.001404
ORF1ab/nsp2585P585PccAccT11B.1.4970.000315
ORF1ab/nsp2585P585LcCacTa11B.1.5240.001406
ORF1ab/nsp2585P585LcCacTa11B.1.5260.000024
ORF1ab/nsp2585P585delCCA---11B.1.5610.000397
ORF1ab/nsp2585P585LcCacTa11B.1.5950.000261
ORF1ab/nsp2585P585PccAccT11B.1.5960.000087
ORF1ab/nsp2585P585SCcaTca11B.1.5960.000087
ORF1ab/nsp2585P585QcCacAa11B.1.5960.000087
ORF1ab/nsp2585P585PccAccG11B.1.617.10.000129
ORF1ab/nsp2585P585FCCATTT11B.1.617.20.000004
ORF1ab/nsp2585P585QcCacAa11B.1.617.20.000004
ORF1ab/nsp2585P585delCCA---11B.1.617.20.000004
ORF1ab/nsp2585P585ACcaGca11B.1.617.20.000004
ORF1ab/nsp2585P585TCcaAca11B.1.617.20.000004
ORF1ab/nsp2585P585delCCA---11B.1.617.30.002985
ORF1ab/nsp2585P585SCcaTca11B.1.6180.004032
ORF1ab/nsp2585P585delCCA---11B.1.6210.000089
ORF1ab/nsp2585P585SCcaTca11B.1.621.10.000506
ORF1ab/nsp2585P585delCCA---11B.570.015152
ORF1ab/nsp2585P585LcCacTa11N.100.029412
ORF1ab/nsp2585P585LcCacTa11P.10.000016
ORF1ab/nsp2585P585PccAccT11P.10.000016
ORF1ab/nsp2585P585ACcaGca11P.1.10.000318
ORF1ab/nsp2585P585PccAccT11P.1.150.000232
ORF1ab/nsp2585P585LcCacTa11P.1.70.000319

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.