CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 577 & Codon = gtT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2577V577VV757VsyngtCgtT816680260.9828562534-2536

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2577V577VgtCgtT80268166All0.001535
ORF1ab/nsp2577V577VgtCgtT14201421B.1.5250.160688
ORF1ab/nsp2577V577VgtCgtT12941313B.1.1.70.001158
ORF1ab/nsp2577V577VgtCgtT993999AY.40.001546
ORF1ab/nsp2577V577VgtCgtT387390B.1.617.20.001457
ORF1ab/nsp2577V577VgtCgtT296297B.1.20.002606
ORF1ab/nsp2577V577VgtCgtT230230AY.440.0014
ORF1ab/nsp2577V577VgtCgtT207207AY.1020.005488
ORF1ab/nsp2577V577VgtCgtT168170AY.250.00101
ORF1ab/nsp2577V577VgtCgtT155155B.1.5320.962733
ORF1ab/nsp2577V577VgtCgtT146146B.1.2210.010371
ORF1ab/nsp2577V577VgtCgtT120128B.10.001099
ORF1ab/nsp2577V577VgtCgtT123124B.1.1770.00162
ORF1ab/nsp2577V577VgtCgtT119119AY.4.20.002581
ORF1ab/nsp2577V577VgtCgtT105105AY.1030.000652
ORF1ab/nsp2577V577VgtCgtT9199AY.430.000403
ORF1ab/nsp2577V577VgtCgtT9696B.1.6280.033827
ORF1ab/nsp2577V577VgtCgtT9191B.1.5260.002139
ORF1ab/nsp2577V577VgtCgtT7678B.1.1.5190.003018
ORF1ab/nsp2577V577VgtCgtT7676AY.30.000756
ORF1ab/nsp2577V577VgtCgtT7272B.1.10.001306
ORF1ab/nsp2577V577VgtCgtT7071B.1.1600.002183
ORF1ab/nsp2577V577VgtCgtT6969B.1.1.1530.075575
ORF1ab/nsp2577V577VgtCgtT668B.1.617.10.000774
ORF1ab/nsp2577V577VgtCgtT6464AY.470.001991
ORF1ab/nsp2577V577VgtCgtT5757B.1.3510.001694
ORF1ab/nsp2577V577VgtCgtT5656AY.390.001384
ORF1ab/nsp2577V577VgtCgtT4949AY.290.000773
ORF1ab/nsp2577V577VgtCgtT4949B.1.4290.001153
ORF1ab/nsp2577V577VgtCgtT4949P.1.150.011385
ORF1ab/nsp2577V577VgtCgtT4646B.1.5650.037277
ORF1ab/nsp2577V577VgtCgtT3839P.10.000599
ORF1ab/nsp2577V577VgtCgtT3435AY.750.001905
ORF1ab/nsp2577V577VgtCgtT3030AY.940.01328
ORF1ab/nsp2577V577VgtCgtT3030B.1.1.280.009337
ORF1ab/nsp2577V577VgtCgtT2626AY.540.002479
ORF1ab/nsp2577V577VgtCgtT2626B.1.3181
ORF1ab/nsp2577V577VgtCgtT2525AY.1200.000929
ORF1ab/nsp2577V577VgtCgtT2424AY.200.000933
ORF1ab/nsp2577V577VgtCgtT2323AY.1000.001058
ORF1ab/nsp2577V577VgtCgtT2323B.1.1.2750.258427
ORF1ab/nsp2577V577VgtCgtT2222AY.260.000623
ORF1ab/nsp2577V577VgtCgtT2121AY.39.10.000832
ORF1ab/nsp2577V577VgtCgtT1919AY.1190.000671
ORF1ab/nsp2577V577VgtCgtT1818AY.130.002898
ORF1ab/nsp2577V577VgtCgtT1818AY.50.000372
ORF1ab/nsp2577V577VgtCgtT1717AY.140.001496
ORF1ab/nsp2577V577VgtCgtT1717AY.230.001186
ORF1ab/nsp2577V577VgtCgtT1717B.1.177.810.003218
ORF1ab/nsp2577V577VgtCgtT1717C.370.001973
ORF1ab/nsp2577V577VgtCgtT1717P.1.70.005428
ORF1ab/nsp2577V577VgtCgtT1616AY.4.40.006547
ORF1ab/nsp2577V577VgtCgtT1516AY.690.0028
ORF1ab/nsp2577V577VgtCgtT1616AY.99.20.001475
ORF1ab/nsp2577V577VgtCgtT1515B.1.360.002189
ORF1ab/nsp2577V577VgtCgtT1515B.1.5610.005955
ORF1ab/nsp2577V577VgtCgtT1314AY.60.000535
ORF1ab/nsp2577V577VgtCgtT1414AY.9.20.000514
ORF1ab/nsp2577V577VgtCgtT1313B.1.1470.009826
ORF1ab/nsp2577V577VgtCgtT1212AY.420.000483
ORF1ab/nsp2577V577VgtCgtT1212AY.46.60.000866
ORF1ab/nsp2577V577VgtCgtT1212B.1.1.700.004093
ORF1ab/nsp2577V577VgtCgtT1212B.1.177.600.002621
ORF1ab/nsp2577V577VgtCgtT1212B.1.3610.015464
ORF1ab/nsp2577V577VgtCgtT1111B.1.1.2770.008346
ORF1ab/nsp2577V577VgtCgtT1111B.1.3440.090164
ORF1ab/nsp2577V577VgtCgtT1111B.1.4090.008594
ORF1ab/nsp2577V577VgtCgtT911B.1.5960.000784
ORF1ab/nsp2577V577VgtCgtT1111P.20.002053
ORF1ab/nsp2577V577VgtCgtT1010AY.270.000647
ORF1ab/nsp2577V577VgtCgtT1010B.1.2340.001319
ORF1ab/nsp2577V577VgtCgtT99AY.1180.000564
ORF1ab/nsp2577V577VgtCgtT99B.1.258.170.000936
ORF1ab/nsp2577V577VgtCgtT89B.1.6370.000585
ORF1ab/nsp2577V577VgtCgtT88AY.98.10.000387
ORF1ab/nsp2577V577VgtCgtT88B0.001022
ORF1ab/nsp2577V577VgtCgtT88B.1.1.1740.027027
ORF1ab/nsp2577V577VgtCgtT88B.1.1.3170.003294
ORF1ab/nsp2577V577VgtCgtT88B.1.4270.000404
ORF1ab/nsp2577V577VgtCgtT77AY.980.000553
ORF1ab/nsp2577V577VgtCgtT77B.1.1.510.012027
ORF1ab/nsp2577V577VgtCgtT77B.1.2410.005682
ORF1ab/nsp2577V577VgtCgtT77B.1.2430.000487
ORF1ab/nsp2577V577VgtCgtT77B.1.3960.00494
ORF1ab/nsp2577V577VgtCgtT77B.1.6070.368421
ORF1ab/nsp2577V577VgtCgtT77B.1.6200.006623
ORF1ab/nsp2577V577VgtCgtT77B.1.6210.00062
ORF1ab/nsp2577V577VgtCgtT77D.20.000525
ORF1ab/nsp2577V577VgtCgtT77P.1.140.000335
ORF1ab/nsp2577V577VgtCgtT46AY.460.000416
ORF1ab/nsp2577V577VgtCgtT66B.1.1.10.00196
ORF1ab/nsp2577V577VgtCgtT66B.1.177.330.009868
ORF1ab/nsp2577V577VgtCgtT66Q.30.00087
ORF1ab/nsp2577V577VgtCgtT16R.10.00009
ORF1ab/nsp2577V577VgtCgtT55AY.1060.001674
ORF1ab/nsp2577V577VgtCgtT55AY.330.000334
ORF1ab/nsp2577V577VgtCgtT55AY.400.004822
ORF1ab/nsp2577V577VgtCgtT55AY.450.000608
ORF1ab/nsp2577V577VgtCgtT55AY.610.000524
ORF1ab/nsp2577V577VgtCgtT55AY.75.10.000902
ORF1ab/nsp2577V577VgtCgtT55B.1.1.2140.000277
ORF1ab/nsp2577V577VgtCgtT55B.1.177.500.023474
ORF1ab/nsp2577V577VgtCgtT55B.1.177.750.005203
ORF1ab/nsp2577V577VgtCgtT55B.1.177.860.000917
ORF1ab/nsp2577V577VgtCgtT55B.1.2130.074627
ORF1ab/nsp2577V577VgtCgtT55B.1.466.20.001956
ORF1ab/nsp2577V577VgtCgtT55B.1.5950.001305
ORF1ab/nsp2577V577VgtCgtT55Q.80.000825
ORF1ab/nsp2577V577VgtCgtT55S.10.024752
ORF1ab/nsp2577V577VgtCgtT44A.23.10.002817
ORF1ab/nsp2577V577VgtCgtT44AY.1170.000338
ORF1ab/nsp2577V577VgtCgtT44AY.380.001997
ORF1ab/nsp2577V577VgtCgtT44AY.4.50.00043
ORF1ab/nsp2577V577VgtCgtT44AY.9.10.000335
ORF1ab/nsp2577V577VgtCgtT44B.1.1.330.001684
ORF1ab/nsp2577V577VgtCgtT44B.1.1.3720.002755
ORF1ab/nsp2577V577VgtCgtT44B.1.36.380.006568
ORF1ab/nsp2577V577VgtCgtT44B.1.6090.001918
ORF1ab/nsp2577V577VgtCgtT44C.360.003643
ORF1ab/nsp2577V577VgtCgtT33A.280.007937
ORF1ab/nsp2577V577VgtCgtT33AY.1010.001471
ORF1ab/nsp2577V577VgtCgtT33AY.160.001139
ORF1ab/nsp2577V577VgtCgtT33AY.4.2.10.000447
ORF1ab/nsp2577V577VgtCgtT33AY.46.20.001906
ORF1ab/nsp2577V577VgtCgtT33AY.5.30.001012
ORF1ab/nsp2577V577VgtCgtT33AY.5.40.00083
ORF1ab/nsp2577V577VgtCgtT33AY.530.000863
ORF1ab/nsp2577V577VgtCgtT33AY.640.001786
ORF1ab/nsp2577V577VgtCgtT33AY.780.004622
ORF1ab/nsp2577V577VgtCgtT33AY.850.001282
ORF1ab/nsp2577V577VgtCgtT33AY.950.002283
ORF1ab/nsp2577V577VgtCgtT33B.1.1.1650.046154
ORF1ab/nsp2577V577VgtCgtT33B.1.1.2220.000612
ORF1ab/nsp2577V577VgtCgtT33B.1.1.2940.003797
ORF1ab/nsp2577V577VgtCgtT33B.1.1.3040.008427
ORF1ab/nsp2577V577VgtCgtT23B.1.1.4200.002012
ORF1ab/nsp2577V577VgtCgtT33B.1.1.4340.001046
ORF1ab/nsp2577V577VgtCgtT33B.1.1.720.090909
ORF1ab/nsp2577V577VgtCgtT33B.1.1390.002199
ORF1ab/nsp2577V577VgtCgtT33B.1.177.70.000495
ORF1ab/nsp2577V577VgtCgtT33B.1.2650.003812
ORF1ab/nsp2577V577VgtCgtT33B.1.3460.003932
ORF1ab/nsp2577V577VgtCgtT33B.1.36.290.001552
ORF1ab/nsp2577V577VgtCgtT33B.1.4280.003061
ORF1ab/nsp2577V577VgtCgtT33B.1.5400.029126
ORF1ab/nsp2577V577VgtCgtT33B.1.5750.00091
ORF1ab/nsp2577V577VgtCgtT33B.1.5760.00272
ORF1ab/nsp2577V577VgtCgtT23B.400.000729
ORF1ab/nsp2577V577VgtCgtT33C.140.012987
ORF1ab/nsp2577V577VgtCgtT12A0.000387
ORF1ab/nsp2577V577VgtCgtT22A.2.50.000998
ORF1ab/nsp2577V577VgtCgtT22A.270.003311
ORF1ab/nsp2577V577VgtCgtT22AD.20.000438
ORF1ab/nsp2577V577VgtCgtT22AY.1080.002205
ORF1ab/nsp2577V577VgtCgtT22AY.1100.000225
ORF1ab/nsp2577V577VgtCgtT22AY.116.10.000623
ORF1ab/nsp2577V577VgtCgtT22AY.1210.000271
ORF1ab/nsp2577V577VgtCgtT22AY.360.000296
ORF1ab/nsp2577V577VgtCgtT22AY.370.000632
ORF1ab/nsp2577V577VgtCgtT22AY.510.001818
ORF1ab/nsp2577V577VgtCgtT12AY.550.000917
ORF1ab/nsp2577V577VgtCgtT22AY.590.001059
ORF1ab/nsp2577V577VgtCgtT22AY.670.000929
ORF1ab/nsp2577V577VgtCgtT22AY.740.000231
ORF1ab/nsp2577V577VgtCgtT22B.1.1.1150.017857
ORF1ab/nsp2577V577VgtCgtT22B.1.1.2310.006192
ORF1ab/nsp2577V577VgtCgtT22B.1.1.2840.000215
ORF1ab/nsp2577V577VgtCgtT22B.1.1.3110.000716
ORF1ab/nsp2577V577VgtCgtT22B.1.1.390.001019
ORF1ab/nsp2577V577VgtCgtT22B.1.160.150.009901
ORF1ab/nsp2577V577VgtCgtT22B.1.177.100.001756
ORF1ab/nsp2577V577VgtCgtT22B.1.177.260.013986
ORF1ab/nsp2577V577VgtCgtT22B.1.177.50.002484
ORF1ab/nsp2577V577VgtCgtT22B.1.177.520.003515
ORF1ab/nsp2577V577VgtCgtT22B.1.214.20.001199
ORF1ab/nsp2577V577VgtCgtT22B.1.2320.001075
ORF1ab/nsp2577V577VgtCgtT22B.1.2580.000133
ORF1ab/nsp2577V577VgtCgtT22B.1.3110.000549
ORF1ab/nsp2577V577VgtCgtT22B.1.351.20.000605
ORF1ab/nsp2577V577VgtCgtT22B.1.351.30.001753
ORF1ab/nsp2577V577VgtCgtT22B.1.36.100.009569
ORF1ab/nsp2577V577VgtCgtT22B.1.5240.002813
ORF1ab/nsp2577V577VgtCgtT22B.1.5600.009259
ORF1ab/nsp2577V577VgtCgtT22B.1.5820.000981
ORF1ab/nsp2577V577VgtCgtT22C.300.003454
ORF1ab/nsp2577V577VgtCgtT22Q.10.000253
ORF1ab/nsp2577V577VgtCgtT11A.2.30.004739
ORF1ab/nsp2577V577VgtCgtT11A.2.40.003367
ORF1ab/nsp2577V577VgtCgtT11A.2.5.20.001572
ORF1ab/nsp2577V577VgtCgtT11AU.10.001266
ORF1ab/nsp2577V577VgtCgtT11AY.10.000396
ORF1ab/nsp2577V577VgtCgtT11AY.1090.00074
ORF1ab/nsp2577V577VgtCgtT11AY.1130.000142
ORF1ab/nsp2577V577VgtCgtT11AY.1140.000231
ORF1ab/nsp2577V577VgtCgtT11AY.1160.000287
ORF1ab/nsp2577V577VgtCgtT11AY.120.000316
ORF1ab/nsp2577V577VgtCgtT11AY.170.008197
ORF1ab/nsp2577V577VgtCgtT11AY.3.10.000085
ORF1ab/nsp2577V577VgtCgtT11AY.300.000396
ORF1ab/nsp2577V577VgtCgtT11AY.320.000532
ORF1ab/nsp2577V577VgtCgtT11AY.34.10.00051
ORF1ab/nsp2577V577VgtCgtT11AY.4.30.000842
ORF1ab/nsp2577V577VgtCgtT11AY.46.10.001027
ORF1ab/nsp2577V577VgtCgtT11AY.46.40.000165
ORF1ab/nsp2577V577VgtCgtT11AY.520.000814
ORF1ab/nsp2577V577VgtCgtT11AY.560.001605
ORF1ab/nsp2577V577VgtCgtT11AY.570.000656
ORF1ab/nsp2577V577VgtCgtT11AY.660.00107
ORF1ab/nsp2577V577VgtCgtT11AY.70.000196
ORF1ab/nsp2577V577VgtCgtT11AY.730.000665
ORF1ab/nsp2577V577VgtCgtT11AY.840.000437
ORF1ab/nsp2577V577VgtCgtT11AY.90.000068
ORF1ab/nsp2577V577VgtCgtT11AY.920.000287
ORF1ab/nsp2577V577VgtCgtT11AZ.20.000821
ORF1ab/nsp2577V577VgtCgtT11B.1.1.100.001115
ORF1ab/nsp2577V577VgtCgtT11B.1.1.1210.002427
ORF1ab/nsp2577V577VgtCgtT11B.1.1.1230.017857
ORF1ab/nsp2577V577VgtCgtT11B.1.1.2160.00089
ORF1ab/nsp2577V577VgtCgtT11B.1.1.2280.003049
ORF1ab/nsp2577V577VgtCgtT11B.1.1.2320.001815
ORF1ab/nsp2577V577VgtCgtT11B.1.1.250.000569
ORF1ab/nsp2577V577VgtCgtT11B.1.1.2630.001558
ORF1ab/nsp2577V577VgtCgtT11B.1.1.2710.055556
ORF1ab/nsp2577V577VgtCgtT11B.1.1.2910.000742
ORF1ab/nsp2577V577VgtCgtT11B.1.1.3010.001179
ORF1ab/nsp2577V577VgtCgtT11B.1.1.3050.003861
ORF1ab/nsp2577V577VgtCgtT11B.1.1.3060.000438
ORF1ab/nsp2577V577VgtCgtT11B.1.1.3200.018182
ORF1ab/nsp2577V577VgtCgtT11B.1.1.3290.003846
ORF1ab/nsp2577V577VgtCgtT11B.1.1.3650.005587
ORF1ab/nsp2577V577VgtCgtT11B.1.1.370.000193
ORF1ab/nsp2577V577VgtCgtT11B.1.1.3780.007299
ORF1ab/nsp2577V577VgtCgtT11B.1.1.3890.006061
ORF1ab/nsp2577V577VgtCgtT11B.1.1.4090.002833
ORF1ab/nsp2577V577VgtCgtT11B.1.1.4320.001266
ORF1ab/nsp2577V577VgtCgtT11B.1.1.470.005348
ORF1ab/nsp2577V577VgtCgtT11B.1.1.4860.001577
ORF1ab/nsp2577V577VgtCgtT11B.1.1.500.000679
ORF1ab/nsp2577V577VgtCgtT11B.1.1.5230.001563
ORF1ab/nsp2577V577VgtCgtT11B.1.1.580.005376
ORF1ab/nsp2577V577VgtCgtT11B.1.1.830.00271
ORF1ab/nsp2577V577VgtCgtT11B.1.1110.001175
ORF1ab/nsp2577V577VgtCgtT11B.1.1270.002198
ORF1ab/nsp2577V577VgtCgtT11B.1.160.140.002119
ORF1ab/nsp2577V577VgtCgtT11B.1.177.160.000664
ORF1ab/nsp2577V577VgtCgtT11B.1.177.170.000821
ORF1ab/nsp2577V577VgtCgtT11B.1.177.320.00135
ORF1ab/nsp2577V577VgtCgtT11B.1.177.440.000519
ORF1ab/nsp2577V577VgtCgtT11B.1.2010.005682
ORF1ab/nsp2577V577VgtCgtT11B.1.2180.005155
ORF1ab/nsp2577V577VgtCgtT11B.1.2230.002778
ORF1ab/nsp2577V577VgtCgtT11B.1.2390.001221
ORF1ab/nsp2577V577VgtCgtT11B.1.2400.000216
ORF1ab/nsp2577V577VgtCgtT11B.1.240.20.030303
ORF1ab/nsp2577V577VgtCgtT11B.1.258.40.003448
ORF1ab/nsp2577V577VgtCgtT11B.1.351.50.0006
ORF1ab/nsp2577V577VgtCgtT11B.1.36.180.00042
ORF1ab/nsp2577V577VgtCgtT11B.1.36.220.001208
ORF1ab/nsp2577V577VgtCgtT11B.1.36.270.000763
ORF1ab/nsp2577V577VgtCgtT11B.1.3750.00082
ORF1ab/nsp2577V577VgtCgtT11B.1.4000.000429
ORF1ab/nsp2577V577VgtCgtT11B.1.4250.002994
ORF1ab/nsp2577V577VgtCgtT11B.1.4380.006536
ORF1ab/nsp2577V577VgtCgtT11B.1.4620.007246
ORF1ab/nsp2577V577VgtCgtT11B.1.466.10.007194
ORF1ab/nsp2577V577VgtCgtT11B.1.4970.000315
ORF1ab/nsp2577V577VgtCgtT11B.1.5230.002451
ORF1ab/nsp2577V577VgtCgtT11B.1.5270.003704
ORF1ab/nsp2577V577VgtCgtT11B.1.575.10.002439
ORF1ab/nsp2577V577VgtCgtT11B.1.6000.005848
ORF1ab/nsp2577V577VgtCgtT11B.1.6180.004032
ORF1ab/nsp2577V577VgtCgtT11B.290.003509
ORF1ab/nsp2577V577VgtCgtT11B.30.000831
ORF1ab/nsp2577V577VgtCgtT11B.550.00295
ORF1ab/nsp2577V577VgtCgtT11B.6.60.000889
ORF1ab/nsp2577V577VgtCgtT11C.120.007194
ORF1ab/nsp2577V577VgtCgtT11C.160.00106
ORF1ab/nsp2577V577VgtCgtT11C.180.002591
ORF1ab/nsp2577V577VgtCgtT11C.350.000774
ORF1ab/nsp2577V577VgtCgtT11C.36.30.000567
ORF1ab/nsp2577V577VgtCgtT11P.1.10.000318
ORF1ab/nsp2577V577VgtCgtT11P.1.120.000484
ORF1ab/nsp2577V577VgtCgtT11P.1.160.000374
ORF1ab/nsp2577V577VgtCgtT11P.1.170.000162
ORF1ab/nsp2577V577VgtCgtT11P.1.20.001156
ORF1ab/nsp2577V577VgtCgtT11P.1.80.004785