CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 574

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2574E574DE754DnonsyngaGgaT245924440.99392525-2527
ORF1ab/nsp2574E574DE754DnonsyngaGgaC2459150.006100042525-2527
ORF1ab/nsp2574E574KE754KnonsynGagAag145914550.9972582525-2527
ORF1ab/nsp2574E574KE754KnonsynGaGAaA145940.00274162525-2527
ORF1ab/nsp2574E574EE754EsyngaGgaA1341134112525-2527
ORF1ab/nsp2574E574GE754GnonsyngAggGg4094050.990222525-2527
ORF1ab/nsp2574E574GE754GnonsyngAGgGA40940.009779952525-2527
ORF1ab/nsp2574E574AE754AnonsyngAggCg1221210.9918032525-2527
ORF1ab/nsp2574E574AE754AnonsyngAGgCA12210.008196722525-2527
ORF1ab/nsp2574E574delE754deldelGAG---636312525-2527
ORF1ab/nsp2574E574VE754VnonsyngAggTg34330.9705882525-2527
ORF1ab/nsp2574E574VE754VnonsyngAGgTA3410.02941182525-2527
ORF1ab/nsp2574E574del1E754del1delgaGga-14130.9285712525-2527
ORF1ab/nsp2574E574del1E754del1delGag-ag1410.07142862525-2527
ORF1ab/nsp2574E574XE754XnonsynGagTag111112525-2527
ORF1ab/nsp2574E574QE754QnonsynGagCag111112525-2527
ORF1ab/nsp2574E574RE754RnonsynGAGAGA750.7142862525-2527
ORF1ab/nsp2574E574RE754RnonsynGAgAGg720.2857142525-2527
ORF1ab/nsp2574E574TE754TnonsynGAgACg210.52525-2527
ORF1ab/nsp2574E574TE754TnonsynGAGACA210.52525-2527
ORF1ab/nsp2574E574ME754MnonsynGAgATg1112525-2527
ORF1ab/nsp2574E574del2E754del2delgAGg--1112525-2527
ORF1ab/nsp2574E574IE754InonsynGAGATA1112525-2527

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2574E574DgaGgaT24442459All0.000467
ORF1ab/nsp2574E574DgaGgaC152459All0.000003
ORF1ab/nsp2574E574KGagAag14551459All0.000278
ORF1ab/nsp2574E574KGaGAaA41459All0.000001
ORF1ab/nsp2574E574EgaGgaA13411341All0.000256
ORF1ab/nsp2574E574KGagAag12041204B.1.1.70.001078
ORF1ab/nsp2574E574EgaGgaA828828AY.250.00498
ORF1ab/nsp2574E574GgAggGg405409All0.000077
ORF1ab/nsp2574E574GgAGgGA4409All0.000001
ORF1ab/nsp2574E574DgaGgaT370370B.1.20.003258
ORF1ab/nsp2574E574DgaGgaT287287AY.40.000447
ORF1ab/nsp2574E574DgaGgaT227228AY.430.001006
ORF1ab/nsp2574E574DgaGgaC1228AY.430.000004
ORF1ab/nsp2574E574DgaGgaT135135AY.30.001343
ORF1ab/nsp2574E574DgaGgaT131132B.1.617.20.000493
ORF1ab/nsp2574E574DgaGgaC1132B.1.617.20.000004
ORF1ab/nsp2574E574GgAggGg127127B.1.20.001118
ORF1ab/nsp2574E574AgAggCg121122All0.000023
ORF1ab/nsp2574E574AgAGgCA1122All0
ORF1ab/nsp2574E574DgaGgaT115115AY.360.017045
ORF1ab/nsp2574E574DgaGgaT9393B.1.5540.409692
ORF1ab/nsp2574E574GgAggGg7777AY.30.000766
ORF1ab/nsp2574E574EgaGgaA7777B.1.1.70.000069
ORF1ab/nsp2574E574AgAggCg7373B.1.1.550.948052
ORF1ab/nsp2574E574DgaGgaT7171AY.4.50.007632
ORF1ab/nsp2574E574DgaGgaT6667B.1.1.70.000059
ORF1ab/nsp2574E574DgaGgaC167B.1.1.70.000001
ORF1ab/nsp2574E574DgaGgaT6666B.1.5170.028181
ORF1ab/nsp2574E574DgaGgaT6464P.1.150.01487
ORF1ab/nsp2574E574delGAG---6363All0.000012
ORF1ab/nsp2574E574DgaGgaT6262B.1.177.361
ORF1ab/nsp2574E574GgAggGg5959B.1.1.70.000053
ORF1ab/nsp2574E574DgaGgaT5555AY.290.000868
ORF1ab/nsp2574E574EgaGgaA5353AY.330.003539
ORF1ab/nsp2574E574DgaGgaT5252AZ.20.042693
ORF1ab/nsp2574E574EgaGgaA5050AY.40.000078
ORF1ab/nsp2574E574DgaGgaT4444B.1.1770.000579
ORF1ab/nsp2574E574KGagAag4444B.1.3490.031451
ORF1ab/nsp2574E574DgaGgaT4040AY.440.000243
ORF1ab/nsp2574E574VgAggTg3334All0.000006
ORF1ab/nsp2574E574VgAGgTA134All0
ORF1ab/nsp2574E574DgaGgaT3232AY.840.013998
ORF1ab/nsp2574E574DgaGgaT2929AY.9.20.001065
ORF1ab/nsp2574E574EgaGgaA2828B.1.220.036891
ORF1ab/nsp2574E574DgaGgaT2828B.1.360.004085
ORF1ab/nsp2574E574DgaGgaT2424B.1.1.630.009259
ORF1ab/nsp2574E574DgaGgaT2323AY.1130.003275
ORF1ab/nsp2574E574DgaGgaT2323B.1.5750.006978
ORF1ab/nsp2574E574EgaGgaA2222AY.4.2.10.003278
ORF1ab/nsp2574E574DgaGgaT1920AY.250.000114
ORF1ab/nsp2574E574DgaGgaC120AY.250.000006
ORF1ab/nsp2574E574GgAggGg2020B.1.177.80.015049
ORF1ab/nsp2574E574DgaGgaT1919P.1.170.003073
ORF1ab/nsp2574E574DgaGgaT1818AY.710.008551
ORF1ab/nsp2574E574DgaGgaT1718B.10.000156
ORF1ab/nsp2574E574DgaGgaC118B.10.000009
ORF1ab/nsp2574E574DgaGgaT1717AY.4.20.000369
ORF1ab/nsp2574E574EgaGgaA1717AY.440.000103
ORF1ab/nsp2574E574DgaGgaT1717B.1.1.3010.020047
ORF1ab/nsp2574E574DgaGgaT1717P.10.000268
ORF1ab/nsp2574E574VgAggTg1616B.1.5510.020645
ORF1ab/nsp2574E574KGagAag1616B.1.617.20.00006
ORF1ab/nsp2574E574EgaGgaA1616B.1.617.20.00006
ORF1ab/nsp2574E574KGagAag1616Q.10.002021
ORF1ab/nsp2574E574EgaGgaA1515AY.750.00084
ORF1ab/nsp2574E574GgAggGg1515B.1.4290.000353
ORF1ab/nsp2574E574DgaGgaT1515B.1.5960.001307
ORF1ab/nsp2574E574del1gaGga-1314All0.000002
ORF1ab/nsp2574E574del1Gag-ag114All0
ORF1ab/nsp2574E574delGAG---1414B.1.1.70.000013
ORF1ab/nsp2574E574DgaGgaT1414B.1.2580.000932
ORF1ab/nsp2574E574KGagAag1313AY.40.00002
ORF1ab/nsp2574E574KGagAag1313B.1.4260.013118
ORF1ab/nsp2574E574DgaGgaT1313B.1.4290.000306
ORF1ab/nsp2574E574DgaGgaT1212AY.1000.000552
ORF1ab/nsp2574E574DgaGgaT712AY.260.000198
ORF1ab/nsp2574E574DgaGgaC512AY.260.000142
ORF1ab/nsp2574E574KGagAag1212AY.360.001779
ORF1ab/nsp2574E574KGagAag1212AY.50.000248
ORF1ab/nsp2574E574XGagTag1111All0.000002
ORF1ab/nsp2574E574QGagCag1111All0.000002
ORF1ab/nsp2574E574DgaGgaT1010AY.60.000411
ORF1ab/nsp2574E574GgAggGg1010B.1.360.001459
ORF1ab/nsp2574E574DgaGgaT99AY.1020.000239
ORF1ab/nsp2574E574EgaGgaA99AY.390.000222
ORF1ab/nsp2574E574DgaGgaT99AY.50.000186
ORF1ab/nsp2574E574EgaGgaA99B.10.000082
ORF1ab/nsp2574E574GgAggGg89B.10.000073
ORF1ab/nsp2574E574GgAGgGA19B.10.000009
ORF1ab/nsp2574E574KGagAag99B.1.10.000163
ORF1ab/nsp2574E574DgaGgaT99B.1.1.2650.028391
ORF1ab/nsp2574E574EgaGgaA99B.1.5260.000212
ORF1ab/nsp2574E574EgaGgaA99P.1.140.00043
ORF1ab/nsp2574E574GgAggGg88A.2.50.003992
ORF1ab/nsp2574E574DgaGgaT88AY.1030.00005
ORF1ab/nsp2574E574KGagAag88AY.1030.00005
ORF1ab/nsp2574E574EgaGgaA88AY.1030.00005
ORF1ab/nsp2574E574KGagAag88AY.250.000048
ORF1ab/nsp2574E574KGagAag88AY.470.000249
ORF1ab/nsp2574E574EgaGgaA88B.1.1.2610.068966
ORF1ab/nsp2574E574QGagCag88B.1.1.70.000007
ORF1ab/nsp2574E574DgaGgaT88B.1.4270.000404
ORF1ab/nsp2574E574RGAGAGA57All0.000001
ORF1ab/nsp2574E574RGAgAGg27All0
ORF1ab/nsp2574E574EgaGgaA77AY.430.000031
ORF1ab/nsp2574E574KGagAag77AY.440.000043
ORF1ab/nsp2574E574EgaGgaA77B.1.177.730.003964
ORF1ab/nsp2574E574EgaGgaA77B.1.177.860.001284
ORF1ab/nsp2574E574EgaGgaA77B.1.20.000062
ORF1ab/nsp2574E574EgaGgaA77B.1.2580.000466
ORF1ab/nsp2574E574delGAG---660.333333
ORF1ab/nsp2574E574DgaGgaT66AY.1110.001099
ORF1ab/nsp2574E574GgAggGg66AY.250.000036
ORF1ab/nsp2574E574VgAggTg66AY.30.00006
ORF1ab/nsp2574E574KGagAag66AY.4.20.00013
ORF1ab/nsp2574E574AgAggCg66AY.430.000027
ORF1ab/nsp2574E574GgAggGg56AY.430.000022
ORF1ab/nsp2574E574GgAGgGA16AY.430.000004
ORF1ab/nsp2574E574DgaGgaC36B.1.10.000054
ORF1ab/nsp2574E574DgaGgaT36B.1.10.000054
ORF1ab/nsp2574E574EgaGgaA66B.1.1.3680.018519
ORF1ab/nsp2574E574AgAggCg66B.1.1.70.000005
ORF1ab/nsp2574E574EgaGgaA66B.1.1770.000079
ORF1ab/nsp2574E574GgAggGg66B.1.1770.000079
ORF1ab/nsp2574E574DgaGgaT66B.1.3510.000178
ORF1ab/nsp2574E574DgaGgaT66B.1.6210.000531
ORF1ab/nsp2574E574EgaGgaA55AY.230.000349
ORF1ab/nsp2574E574AgAggCg55AY.250.00003
ORF1ab/nsp2574E574EgaGgaA55AY.30.00005
ORF1ab/nsp2574E574DgaGgaT55AY.330.000334
ORF1ab/nsp2574E574GgAggGg55AY.40.000008
ORF1ab/nsp2574E574EgaGgaA55AY.450.000608
ORF1ab/nsp2574E574AgAggCg55B.10.000046
ORF1ab/nsp2574E574EgaGgaA55B.1.1.1630.038168
ORF1ab/nsp2574E574EgaGgaA55B.1.1.5190.000199
ORF1ab/nsp2574E574DgaGgaT55B.1.3110.001373
ORF1ab/nsp2574E574KGagAag55B.1.5260.000118
ORF1ab/nsp2574E574KGagAag44AY.1000.000184
ORF1ab/nsp2574E574DgaGgaT44AY.1190.000141
ORF1ab/nsp2574E574KGagAag44AY.120.10.001284
ORF1ab/nsp2574E574DgaGgaT44AY.390.000099
ORF1ab/nsp2574E574DgaGgaT44AY.420.000161
ORF1ab/nsp2574E574DgaGgaT44AY.450.000487
ORF1ab/nsp2574E574DgaGgaT44AY.470.000124
ORF1ab/nsp2574E574delGAG---44B.10.000037
ORF1ab/nsp2574E574XGagTag44B.1.1.70.000004
ORF1ab/nsp2574E574GgAggGg44B.1.177.280.02963
ORF1ab/nsp2574E574DgaGgaT44B.1.177.810.000757
ORF1ab/nsp2574E574KGagAag44B.1.20.000035
ORF1ab/nsp2574E574KGagAag24B.1.2210.000142
ORF1ab/nsp2574E574KGaGAaA24B.1.2210.000142
ORF1ab/nsp2574E574DgaGgaT44B.1.2340.000528
ORF1ab/nsp2574E574EgaGgaA44B.1.258.170.000416
ORF1ab/nsp2574E574EgaGgaA44B.1.4270.000202
ORF1ab/nsp2574E574GgAggGg44B.1.5050.017544
ORF1ab/nsp2574E574EgaGgaA44B.1.5960.000349
ORF1ab/nsp2574E574GgAggGg44B.1.5960.000349
ORF1ab/nsp2574E574EgaGgaA44B.1.6280.001409
ORF1ab/nsp2574E574EgaGgaA44P.10.000063
ORF1ab/nsp2574E574KGagAag230.111111
ORF1ab/nsp2574E574KGaGAaA130.055556
ORF1ab/nsp2574E574EgaGgaA33AY.1170.000254
ORF1ab/nsp2574E574DgaGgaT33AY.1170.000254
ORF1ab/nsp2574E574GgAggGg33AY.1170.000254
ORF1ab/nsp2574E574EgaGgaA33AY.16.10.00141
ORF1ab/nsp2574E574DgaGgaT33AY.200.000117
ORF1ab/nsp2574E574DgaGgaT33AY.380.001498
ORF1ab/nsp2574E574del1gaGga-33AY.440.000018
ORF1ab/nsp2574E574EgaGgaA33AY.46.40.000494
ORF1ab/nsp2574E574DgaGgaT33AY.75.10.000541
ORF1ab/nsp2574E574EgaGgaA33AY.760.014493
ORF1ab/nsp2574E574GgAggGg33AY.9.20.00011
ORF1ab/nsp2574E574EgaGgaA33AY.980.000237
ORF1ab/nsp2574E574KGagAag33B.10.000027
ORF1ab/nsp2574E574EgaGgaA33B.1.10.000054
ORF1ab/nsp2574E574DgaGgaT33B.1.1.3180.000905
ORF1ab/nsp2574E574delGAG---33B.1.1.330.001263
ORF1ab/nsp2574E574VgAggTg33B.1.1.70.000003
ORF1ab/nsp2574E574EgaGgaA33B.1.110.30.002155
ORF1ab/nsp2574E574EgaGgaA33B.1.2210.000213
ORF1ab/nsp2574E574DgaGgaT33B.1.2410.002435
ORF1ab/nsp2574E574DgaGgaT33B.1.3830.027027
ORF1ab/nsp2574E574GgAggGg33B.1.4110.011111
ORF1ab/nsp2574E574GgAggGg33B.1.4270.000151
ORF1ab/nsp2574E574KGagAag33B.1.4290.000071
ORF1ab/nsp2574E574AgAggCg33B.1.617.20.000011
ORF1ab/nsp2574E574KGagAag33P.10.000047
ORF1ab/nsp2574E574KGagAag33R.10.00027
ORF1ab/nsp2574E574GgAggGg120.055556
ORF1ab/nsp2574E574RGAgAGg120.055556
ORF1ab/nsp2574E574VgAggTg120.055556
ORF1ab/nsp2574E574GgAGgGA120.055556
ORF1ab/nsp2574E574VgAGgTA120.055556
ORF1ab/nsp2574E574RGAGAGA120.055556
ORF1ab/nsp2574E574TGAgACg12All0
ORF1ab/nsp2574E574TGAGACA12All0
ORF1ab/nsp2574E574GgAggGg22AY.1030.000012
ORF1ab/nsp2574E574AgAggCg22AY.1060.00067
ORF1ab/nsp2574E574DgaGgaT22AY.1100.000225
ORF1ab/nsp2574E574EgaGgaA22AY.200.000078
ORF1ab/nsp2574E574KGagAag22AY.23.10.000835
ORF1ab/nsp2574E574EgaGgaA22AY.290.000032
ORF1ab/nsp2574E574KGagAag22AY.30.00002
ORF1ab/nsp2574E574DgaGgaT22AY.3.10.000171
ORF1ab/nsp2574E574EgaGgaA22AY.340.000194
ORF1ab/nsp2574E574DgaGgaT22AY.39.10.000079
ORF1ab/nsp2574E574VgAggTg22AY.4.20.000043
ORF1ab/nsp2574E574KGaGAaA12AY.430.000004
ORF1ab/nsp2574E574KGagAag12AY.430.000004
ORF1ab/nsp2574E574EgaGgaA22AY.470.000062
ORF1ab/nsp2574E574EgaGgaA22AY.50.000041
ORF1ab/nsp2574E574AgAggCg22AY.5.30.000675
ORF1ab/nsp2574E574DgaGgaT22AY.540.000191
ORF1ab/nsp2574E574DgaGgaT22AY.610.00021
ORF1ab/nsp2574E574DgaGgaT22AY.7.10.000225
ORF1ab/nsp2574E574EgaGgaA22AY.9.10.000167
ORF1ab/nsp2574E574DgaGgaT22AY.9.10.000167
ORF1ab/nsp2574E574EgaGgaA22AY.9.20.000073
ORF1ab/nsp2574E574DgaGgaT22AY.980.000158
ORF1ab/nsp2574E574AgAggCg22B.1.10.000036
ORF1ab/nsp2574E574delGAG---22B.1.10.000036
ORF1ab/nsp2574E574DgaGgaT22B.1.1.10.000653
ORF1ab/nsp2574E574delGAG---22B.1.1.3480.001592
ORF1ab/nsp2574E574EgaGgaA22B.1.1.3620.011236
ORF1ab/nsp2574E574KGagAag22B.1.1.3740.004751
ORF1ab/nsp2574E574EgaGgaA22B.1.1.4480.004065
ORF1ab/nsp2574E574EgaGgaA22B.1.1.4530.016949
ORF1ab/nsp2574E574del1gaGga-22B.1.1.70.000002
ORF1ab/nsp2574E574EgaGgaA22B.1.1600.000062
ORF1ab/nsp2574E574KGagAag22B.1.1770.000026
ORF1ab/nsp2574E574DgaGgaT22B.1.177.40.000422
ORF1ab/nsp2574E574EgaGgaA22B.1.177.530.004785
ORF1ab/nsp2574E574del1gaGga-22B.1.20.000018
ORF1ab/nsp2574E574delGAG---22B.1.20.000018
ORF1ab/nsp2574E574RGAGAGA12B.1.2210.000071
ORF1ab/nsp2574E574TGAgACg12B.1.2210.000071
ORF1ab/nsp2574E574RGAgAGg12B.1.2210.000071
ORF1ab/nsp2574E574AgAggCg12B.1.2210.000071
ORF1ab/nsp2574E574AgAGgCA12B.1.2210.000071
ORF1ab/nsp2574E574TGAGACA12B.1.2210.000071
ORF1ab/nsp2574E574GgAGgGA12B.1.2210.000071
ORF1ab/nsp2574E574GgAggGg12B.1.2210.000071
ORF1ab/nsp2574E574DgaGgaT22B.1.2320.001075
ORF1ab/nsp2574E574KGagAag22B.1.2340.000264
ORF1ab/nsp2574E574DgaGgaT22B.1.36.100.009569
ORF1ab/nsp2574E574DgaGgaT22B.1.3620.003082
ORF1ab/nsp2574E574DgaGgaT22B.1.3980.005952
ORF1ab/nsp2574E574delGAG---22B.1.4240.016129
ORF1ab/nsp2574E574delGAG---22B.1.4290.000047
ORF1ab/nsp2574E574EgaGgaA22B.1.438.10.000215
ORF1ab/nsp2574E574KGagAag22B.1.5250.000226
ORF1ab/nsp2574E574AgAggCg22B.1.5260.000047
ORF1ab/nsp2574E574GgAggGg22B.1.5820.000981
ORF1ab/nsp2574E574GgAggGg22B.1.5950.000522
ORF1ab/nsp2574E574DgaGgaT22B.1.6090.000959
ORF1ab/nsp2574E574GgAggGg22B.1.617.20.000008
ORF1ab/nsp2574E574KGagAag22B.1.6280.000705
ORF1ab/nsp2574E574EgaGgaA22C.260.014706
ORF1ab/nsp2574E574EgaGgaA22C.360.001821
ORF1ab/nsp2574E574KGagAag22C.370.000232
ORF1ab/nsp2574E574delGAG---22N.60.014184
ORF1ab/nsp2574E574delGAG---22P.10.000032
ORF1ab/nsp2574E574GgAggGg22P.10.000032
ORF1ab/nsp2574E574DgaGgaC22P.1.70.000639
ORF1ab/nsp2574E574KGagAag22Q.30.00029
ORF1ab/nsp2574E574EgaGgaA110.055556
ORF1ab/nsp2574E574IGAGATA110.055556
ORF1ab/nsp2574E574MGAgATg110.055556
ORF1ab/nsp2574E574EgaGgaA11A.20.000662
ORF1ab/nsp2574E574DgaGgaT11A.20.000662
ORF1ab/nsp2574E574KGagAag11A.23.10.000704
ORF1ab/nsp2574E574DgaGgaT11AD.20.000219
ORF1ab/nsp2574E574del2gAGg--11All0
ORF1ab/nsp2574E574IGAGATA11All0
ORF1ab/nsp2574E574MGAgATg11All0
ORF1ab/nsp2574E574DgaGgaT11AY.10.000396
ORF1ab/nsp2574E574GgAggGg11AY.1000.000046
ORF1ab/nsp2574E574DgaGgaT11AY.1010.00049
ORF1ab/nsp2574E574EgaGgaA11AY.1020.000027
ORF1ab/nsp2574E574GgAggGg11AY.1020.000027
ORF1ab/nsp2574E574AgAggCg11AY.1020.000027
ORF1ab/nsp2574E574delGAG---11AY.1030.000006
ORF1ab/nsp2574E574del1gaGga-11AY.1030.000006
ORF1ab/nsp2574E574DgaGgaT11AY.1060.000335
ORF1ab/nsp2574E574delGAG---11AY.1080.001103
ORF1ab/nsp2574E574KGagAag11AY.1100.000113
ORF1ab/nsp2574E574XGagTag11AY.1100.000113
ORF1ab/nsp2574E574EgaGgaA11AY.1100.000113
ORF1ab/nsp2574E574delGAG---11AY.1110.000183
ORF1ab/nsp2574E574EgaGgaA11AY.1140.000231
ORF1ab/nsp2574E574EgaGgaA11AY.1160.000287
ORF1ab/nsp2574E574KGagAag11AY.1170.000085
ORF1ab/nsp2574E574EgaGgaA11AY.1180.000063
ORF1ab/nsp2574E574GgAggGg11AY.1180.000063
ORF1ab/nsp2574E574KGagAag11AY.1190.000035
ORF1ab/nsp2574E574EgaGgaA11AY.1190.000035
ORF1ab/nsp2574E574DgaGgaT11AY.1200.000037
ORF1ab/nsp2574E574EgaGgaA11AY.1200.000037
ORF1ab/nsp2574E574KGagAag11AY.1210.000135
ORF1ab/nsp2574E574DgaGgaT11AY.140.000088
ORF1ab/nsp2574E574EgaGgaA11AY.140.000088
ORF1ab/nsp2574E574DgaGgaT11AY.190.00114
ORF1ab/nsp2574E574delGAG---11AY.190.00114
ORF1ab/nsp2574E574EgaGgaA11AY.20.000356
ORF1ab/nsp2574E574KGagAag11AY.230.00007
ORF1ab/nsp2574E574DgaGgaT11AY.230.00007
ORF1ab/nsp2574E574GgAggGg11AY.240.000431
ORF1ab/nsp2574E574del2gAGg--11AY.240.000431
ORF1ab/nsp2574E574delGAG---11AY.250.000006
ORF1ab/nsp2574E574GgAggGg11AY.260.000028
ORF1ab/nsp2574E574EgaGgaA11AY.260.000028
ORF1ab/nsp2574E574KGagAag11AY.270.000065
ORF1ab/nsp2574E574delGAG---11AY.290.000016
ORF1ab/nsp2574E574KGagAag11AY.290.000016
ORF1ab/nsp2574E574delGAG---11AY.30.00001
ORF1ab/nsp2574E574AgAggCg11AY.30.00001
ORF1ab/nsp2574E574DgaGgaT11AY.300.000396
ORF1ab/nsp2574E574DgaGgaT11AY.340.000097
ORF1ab/nsp2574E574KGagAag11AY.340.000097
ORF1ab/nsp2574E574KGagAag11AY.370.000316
ORF1ab/nsp2574E574GgAggGg11AY.380.000499
ORF1ab/nsp2574E574GgAggGg11AY.390.000025
ORF1ab/nsp2574E574KGagAag11AY.390.000025
ORF1ab/nsp2574E574VgAggTg11AY.390.000025
ORF1ab/nsp2574E574DgaGgaT11AY.39.1.10.000725
ORF1ab/nsp2574E574delGAG---11AY.40.000002
ORF1ab/nsp2574E574AgAggCg11AY.4.2.10.000149
ORF1ab/nsp2574E574DgaGgaT11AY.4.40.000409
ORF1ab/nsp2574E574delGAG---11AY.4.50.000107
ORF1ab/nsp2574E574EgaGgaA11AY.400.000964
ORF1ab/nsp2574E574delGAG---11AY.420.00004
ORF1ab/nsp2574E574RGAGAGA11AY.430.000004
ORF1ab/nsp2574E574RGAGAGA11AY.440.000006
ORF1ab/nsp2574E574GgAggGg11AY.440.000006
ORF1ab/nsp2574E574KGagAag11AY.450.000122
ORF1ab/nsp2574E574DgaGgaT11AY.460.000104
ORF1ab/nsp2574E574GgAggGg11AY.46.60.000072
ORF1ab/nsp2574E574DgaGgaT11AY.46.60.000072
ORF1ab/nsp2574E574XGagTag11AY.46.60.000072
ORF1ab/nsp2574E574AgAggCg11AY.470.000031
ORF1ab/nsp2574E574DgaGgaT11AY.480.000465
ORF1ab/nsp2574E574VgAggTg11AY.50.000021
ORF1ab/nsp2574E574AgAggCg11AY.50.000021
ORF1ab/nsp2574E574GgAggGg11AY.50.000021
ORF1ab/nsp2574E574EgaGgaA11AY.5.40.000277
ORF1ab/nsp2574E574DgaGgaT11AY.500.000799
ORF1ab/nsp2574E574XGagTag11AY.550.000917
ORF1ab/nsp2574E574KGagAag11AY.60.000041
ORF1ab/nsp2574E574EgaGgaA11AY.60.000041
ORF1ab/nsp2574E574delGAG---11AY.60.000041
ORF1ab/nsp2574E574XGagTag11AY.610.000105
ORF1ab/nsp2574E574DgaGgaT11AY.670.000464
ORF1ab/nsp2574E574DgaGgaT11AY.680.000274
ORF1ab/nsp2574E574AgAggCg11AY.690.000187
ORF1ab/nsp2574E574DgaGgaT11AY.700.000209
ORF1ab/nsp2574E574KGagAag11AY.710.000475
ORF1ab/nsp2574E574EgaGgaA11AY.740.000116
ORF1ab/nsp2574E574DgaGgaT11AY.750.000056
ORF1ab/nsp2574E574KGagAag11AY.90.000068
ORF1ab/nsp2574E574DgaGgaT11AY.90.000068
ORF1ab/nsp2574E574DgaGgaT11AY.940.000443
ORF1ab/nsp2574E574DgaGgaT11AY.950.000761
ORF1ab/nsp2574E574AgAggCg11AY.980.000079
ORF1ab/nsp2574E574del1gaGga-11B0.000128
ORF1ab/nsp2574E574del1gaGga-11B.10.000009
ORF1ab/nsp2574E574KGagAag11B.1.1.1610.003534
ORF1ab/nsp2574E574delGAG---11B.1.1.2070.001182
ORF1ab/nsp2574E574KGagAag11B.1.1.2160.00089
ORF1ab/nsp2574E574KGagAag11B.1.1.2190.005
ORF1ab/nsp2574E574EgaGgaA11B.1.1.2220.000204
ORF1ab/nsp2574E574DgaGgaT11B.1.1.2220.000204
ORF1ab/nsp2574E574KGagAag11B.1.1.2430.004082
ORF1ab/nsp2574E574AgAggCg11B.1.1.2650.003155
ORF1ab/nsp2574E574EgaGgaA11B.1.1.2840.000107
ORF1ab/nsp2574E574DgaGgaT11B.1.1.2840.000107
ORF1ab/nsp2574E574GgAggGg11B.1.1.3040.002809
ORF1ab/nsp2574E574GgAggGg11B.1.1.3180.000302
ORF1ab/nsp2574E574KGagAag11B.1.1.330.000421
ORF1ab/nsp2574E574GgAggGg11B.1.1.3690.000446
ORF1ab/nsp2574E574EgaGgaA11B.1.1.3690.000446
ORF1ab/nsp2574E574EgaGgaA11B.1.1.370.000193
ORF1ab/nsp2574E574EgaGgaA11B.1.1.3980.003226
ORF1ab/nsp2574E574delGAG---11B.1.1.4160.000905
ORF1ab/nsp2574E574DgaGgaT11B.1.1.4230.0625
ORF1ab/nsp2574E574EgaGgaA11B.1.1.4340.000349
ORF1ab/nsp2574E574delGAG---11B.1.1.4480.002033
ORF1ab/nsp2574E574DgaGgaT11B.1.1.4620.008621
ORF1ab/nsp2574E574GgAggGg11B.1.1.4860.001577
ORF1ab/nsp2574E574EgaGgaA11B.1.1.500.000679
ORF1ab/nsp2574E574DgaGgaT11B.1.1.5140.038462
ORF1ab/nsp2574E574KGagAag11B.1.1.5190.00004
ORF1ab/nsp2574E574DgaGgaT11B.1.1.890.006061
ORF1ab/nsp2574E574GgAggGg11B.1.120.008
ORF1ab/nsp2574E574GgAggGg11B.1.1570.002985
ORF1ab/nsp2574E574DgaGgaT11B.1.1600.000031
ORF1ab/nsp2574E574GgAggGg11B.1.160.320.004292
ORF1ab/nsp2574E574DgaGgaT11B.1.160.70.002079
ORF1ab/nsp2574E574EgaGgaA11B.1.1620.005025
ORF1ab/nsp2574E574XGagTag11B.1.1770.000013
ORF1ab/nsp2574E574VgAggTg11B.1.1770.000013
ORF1ab/nsp2574E574DgaGgaT11B.1.177.120.000152
ORF1ab/nsp2574E574DgaGgaT11B.1.177.170.000821
ORF1ab/nsp2574E574DgaGgaT11B.1.177.180.00116
ORF1ab/nsp2574E574DgaGgaT11B.1.177.210.000076
ORF1ab/nsp2574E574EgaGgaA11B.1.177.50.001242
ORF1ab/nsp2574E574del1gaGga-11B.1.177.730.000566
ORF1ab/nsp2574E574DgaGgaT11B.1.177.750.001041
ORF1ab/nsp2574E574delGAG---11B.1.177.830.001481
ORF1ab/nsp2574E574AgAggCg11B.1.177.860.000183
ORF1ab/nsp2574E574XGagTag11B.1.20.000009
ORF1ab/nsp2574E574AgAggCg11B.1.2060.000816
ORF1ab/nsp2574E574DgaGgaT11B.1.2100.002132
ORF1ab/nsp2574E574DgaGgaT11B.1.214.20.0006
ORF1ab/nsp2574E574DgaGgaT11B.1.2210.000071
ORF1ab/nsp2574E574GgAggGg11B.1.2220.001692
ORF1ab/nsp2574E574EgaGgaA11B.1.2320.000537
ORF1ab/nsp2574E574DgaGgaT11B.1.2390.001221
ORF1ab/nsp2574E574QGagCag11B.1.2430.00007
ORF1ab/nsp2574E574EgaGgaA11B.1.2430.00007
ORF1ab/nsp2574E574XGagTag11B.1.3280.03125
ORF1ab/nsp2574E574DgaGgaT11B.1.3290.000608
ORF1ab/nsp2574E574DgaGgaT11B.1.3330.010526
ORF1ab/nsp2574E574DgaGgaT11B.1.3410.022727
ORF1ab/nsp2574E574GgAggGg11B.1.3510.00003
ORF1ab/nsp2574E574KGagAag11B.1.360.000146
ORF1ab/nsp2574E574EgaGgaA11B.1.36.170.000494
ORF1ab/nsp2574E574EgaGgaA11B.1.36.180.00042
ORF1ab/nsp2574E574delGAG---11B.1.36.180.00042
ORF1ab/nsp2574E574DgaGgaT11B.1.36.210.00216
ORF1ab/nsp2574E574EgaGgaA11B.1.36.290.000517
ORF1ab/nsp2574E574QGagCag11B.1.36.290.000517
ORF1ab/nsp2574E574delGAG---11B.1.36.380.001642
ORF1ab/nsp2574E574AgAggCg11B.1.3690.000285
ORF1ab/nsp2574E574EgaGgaA11B.1.3710.001122
ORF1ab/nsp2574E574DgaGgaT11B.1.3820.008929
ORF1ab/nsp2574E574DgaGgaT11B.1.3910.001127
ORF1ab/nsp2574E574AgAggCg11B.1.4000.000429
ORF1ab/nsp2574E574EgaGgaA11B.1.416.10.001563
ORF1ab/nsp2574E574KGagAag11B.1.4270.00005
ORF1ab/nsp2574E574DgaGgaT11B.1.4330.003195
ORF1ab/nsp2574E574DgaGgaT11B.1.4360.001029
ORF1ab/nsp2574E574EgaGgaA11B.1.4590.004082
ORF1ab/nsp2574E574KGagAag11B.1.4990.00105
ORF1ab/nsp2574E574DgaGgaT11B.1.5250.000113
ORF1ab/nsp2574E574EgaGgaA11B.1.5320.006211
ORF1ab/nsp2574E574DgaGgaT11B.1.5410.004425
ORF1ab/nsp2574E574GgAggGg11B.1.5560.007519
ORF1ab/nsp2574E574GgAggGg11B.1.5580.004566
ORF1ab/nsp2574E574delGAG---11B.1.5610.000397
ORF1ab/nsp2574E574DgaGgaT11B.1.5650.00081
ORF1ab/nsp2574E574EgaGgaA11B.1.5820.000491
ORF1ab/nsp2574E574KGagAag11B.1.5870.001898
ORF1ab/nsp2574E574del1gaGga-11B.1.5950.000261
ORF1ab/nsp2574E574del1Gag-ag11B.1.5960.000087
ORF1ab/nsp2574E574DgaGgaT11B.1.5970.00463
ORF1ab/nsp2574E574DgaGgaT11B.1.617.10.000129
ORF1ab/nsp2574E574KGagAag11B.1.617.10.000129
ORF1ab/nsp2574E574delGAG---11B.1.617.20.000004
ORF1ab/nsp2574E574del1gaGga-11B.1.617.20.000004
ORF1ab/nsp2574E574RGAGAGA11B.1.617.20.000004
ORF1ab/nsp2574E574delGAG---11B.1.617.30.002985
ORF1ab/nsp2574E574delGAG---11B.1.6210.000089
ORF1ab/nsp2574E574VgAggTg11B.1.6370.000073
ORF1ab/nsp2574E574EgaGgaA11B.40.002208
ORF1ab/nsp2574E574DgaGgaT11B.400.000364
ORF1ab/nsp2574E574delGAG---11B.570.015152
ORF1ab/nsp2574E574GgAggGg11C.260.007353
ORF1ab/nsp2574E574DgaGgaT11C.370.000116
ORF1ab/nsp2574E574DgaGgaT11D.20.000075
ORF1ab/nsp2574E574QGagCag11D.20.000075
ORF1ab/nsp2574E574GgAggGg11N.30.005814
ORF1ab/nsp2574E574AgAggCg11P.10.000016
ORF1ab/nsp2574E574VgAggTg11P.10.000016
ORF1ab/nsp2574E574DgaGgaT11P.1.140.000048
ORF1ab/nsp2574E574AgAggCg11P.1.20.001156
ORF1ab/nsp2574E574KGagAag11P.1.20.001156
ORF1ab/nsp2574E574EgaGgaA11P.20.000187
ORF1ab/nsp2574E574DgaGgaT11Q.10.000126