CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 568 & Codon = cTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2568P568LP748LnonsyncCccTc482444720.9270322507-2509

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2568P568LcCccTc44724824All0.000855
ORF1ab/nsp2568P568LcCccTc12031206AY.40.001872
ORF1ab/nsp2568P568LcCccTc748757B.1.1.70.00067
ORF1ab/nsp2568P568LcCccTc307313B.1.617.20.001156
ORF1ab/nsp2568P568LcCccTc6283AY.1170.000507
ORF1ab/nsp2568P568LcCccTc188191AY.250.001131
ORF1ab/nsp2568P568LcCccTc153156AY.1030.00095
ORF1ab/nsp2568P568LcCccTc153153AY.420.006155
ORF1ab/nsp2568P568LcCccTc151152AY.430.000669
ORF1ab/nsp2568P568LcCccTc149149AY.1000.006855
ORF1ab/nsp2568P568LcCccTc125129B.10.001145
ORF1ab/nsp2568P568LcCccTc96103B.1.20.000845
ORF1ab/nsp2568P568LcCccTc5859AY.30.000577
ORF1ab/nsp2568P568LcCccTc5959P.10.000929
ORF1ab/nsp2568P568LcCccTc5257B.1.10.000943
ORF1ab/nsp2568P568LcCccTc5656AY.46.40.009212
ORF1ab/nsp2568P568LcCccTc5555A.150.873016
ORF1ab/nsp2568P568LcCccTc4051AY.440.000243
ORF1ab/nsp2568P568LcCccTc4750B.1.4290.001106
ORF1ab/nsp2568P568LcCccTc4445B.1.5960.003834
ORF1ab/nsp2568P568LcCccTc3434P.1.140.001625
ORF1ab/nsp2568P568LcCccTc3232B.1.5260.000752
ORF1ab/nsp2568P568LcCccTc3131AY.39.10.001228
ORF1ab/nsp2568P568LcCccTc3030AY.290.000473
ORF1ab/nsp2568P568LcCccTc2929AY.1110.005311
ORF1ab/nsp2568P568LcCccTc2424B.1.1770.000316
ORF1ab/nsp2568P568LcCccTc2222B.1.1.2140.00122
ORF1ab/nsp2568P568LcCccTc1818AY.470.00056
ORF1ab/nsp2568P568LcCccTc1717B.1.177.40.003588
ORF1ab/nsp2568P568LcCccTc1616AY.1070.007456
ORF1ab/nsp2568P568LcCccTc1416B.1.2430.000974
ORF1ab/nsp2568P568LcCccTc1616B.1.3790.275862
ORF1ab/nsp2568P568LcCccTc1515AY.460.001561
ORF1ab/nsp2568P568LcCccTc1414AY.46.60.001011
ORF1ab/nsp2568P568LcCccTc1414AY.610.001467
ORF1ab/nsp2568P568LcCccTc1212AY.390.000297
ORF1ab/nsp2568P568LcCccTc1111B0.001406
ORF1ab/nsp2568P568LcCccTc1111B.1.177.540.006671
ORF1ab/nsp2568P568LcCccTc1010AY.880.008842
ORF1ab/nsp2568P568LcCccTc1010B.1.2580.000665
ORF1ab/nsp2568P568LcCccTc79AY.260.000198
ORF1ab/nsp2568P568LcCccTc99B.1.1.4320.011392
ORF1ab/nsp2568P568LcCccTc99B.1.2360.01848
ORF1ab/nsp2568P568LcCccTc99B.1.3510.000268
ORF1ab/nsp2568P568LcCccTc99B.1.4270.000454
ORF1ab/nsp2568P568LcCccTc88B.1.5820.003925
ORF1ab/nsp2568P568LcCccTc77AY.1190.000247
ORF1ab/nsp2568P568LcCccTc67AY.200.000233
ORF1ab/nsp2568P568LcCccTc77AY.270.000453
ORF1ab/nsp2568P568LcCccTc77AY.340.000679
ORF1ab/nsp2568P568LcCccTc77AY.9.20.000257
ORF1ab/nsp2568P568LcCccTc77B.1.177.320.009447
ORF1ab/nsp2568P568LcCccTc77B.1.6210.00062
ORF1ab/nsp2568P568LcCccTc66AY.1020.000159
ORF1ab/nsp2568P568LcCccTc66AY.23.10.002504
ORF1ab/nsp2568P568LcCccTc66AY.4.20.00013
ORF1ab/nsp2568P568LcCccTc66AY.50.000124
ORF1ab/nsp2568P568LcCccTc66AY.90.000406
ORF1ab/nsp2568P568LcCccTc66AY.98.10.000291
ORF1ab/nsp2568P568LcCccTc66B.1.1.2220.001224
ORF1ab/nsp2568P568LcCccTc66B.1.1600.000187
ORF1ab/nsp2568P568LcCccTc66B.1.2210.000426
ORF1ab/nsp2568P568LcCccTc66P.1.130.005391
ORF1ab/nsp2568P568LcCccTc66Q.80.000989
ORF1ab/nsp2568P568LcCccTc55B.1.1.5190.000199
ORF1ab/nsp2568P568LcCccTc55B.1.258.170.00052
ORF1ab/nsp2568P568LcCccTc55B.1.360.00073
ORF1ab/nsp2568P568LcCccTc55B.1.36.290.002587
ORF1ab/nsp2568P568LcCccTc55B.1.575.10.012195
ORF1ab/nsp2568P568LcCccTc55B.1.6280.001762
ORF1ab/nsp2568P568LcCccTc55B.1.6370.000365
ORF1ab/nsp2568P568LcCccTc44AY.1160.001147
ORF1ab/nsp2568P568LcCccTc44AY.120.001264
ORF1ab/nsp2568P568LcCccTc44AY.680.001095
ORF1ab/nsp2568P568LcCccTc44AY.700.000834
ORF1ab/nsp2568P568LcCccTc44AY.750.000224
ORF1ab/nsp2568P568LcCccTc44AY.980.000316
ORF1ab/nsp2568P568LcCccTc44B.1.5050.017544
ORF1ab/nsp2568P568LcCccTc44B.1.621.10.002023
ORF1ab/nsp2568P568LcCccTc34P.1.170.000485
ORF1ab/nsp2568P568LcCccTc44P.20.000747
ORF1ab/nsp2568P568LcCccTc33AY.230.000209
ORF1ab/nsp2568P568LcCccTc33B.1.1.2910.002227
ORF1ab/nsp2568P568LcCccTc33B.1.1.3710.03125
ORF1ab/nsp2568P568LcCccTc33B.1.1.700.001023
ORF1ab/nsp2568P568LcCccTc33B.1.177.100.002634
ORF1ab/nsp2568P568LcCccTc13B.1.177.210.000076
ORF1ab/nsp2568P568LcCccTc33B.1.177.70.000495
ORF1ab/nsp2568P568LcCccTc33B.1.221.20.012048
ORF1ab/nsp2568P568LcCccTc33B.1.466.20.001174
ORF1ab/nsp2568P568LcCccTc33B.1.617.10.000387
ORF1ab/nsp2568P568LcCccTc33C.370.000348
ORF1ab/nsp2568P568LcCccTc33P.1.70.000958
ORF1ab/nsp2568P568LcCccTc22AY.1180.000125
ORF1ab/nsp2568P568LcCccTc22AY.1200.000074
ORF1ab/nsp2568P568LcCccTc22AY.140.000176
ORF1ab/nsp2568P568LcCccTc22AY.16.10.00094
ORF1ab/nsp2568P568LcCccTc22AY.3.10.000171
ORF1ab/nsp2568P568LcCccTc22AY.350.000466
ORF1ab/nsp2568P568LcCccTc22AY.410.000588
ORF1ab/nsp2568P568LcCccTc22AY.450.000243
ORF1ab/nsp2568P568LcCccTc22AY.5.30.000675
ORF1ab/nsp2568P568LcCccTc22AY.530.000575
ORF1ab/nsp2568P568LcCccTc22AY.60.000082
ORF1ab/nsp2568P568LcCccTc22AY.620.000871
ORF1ab/nsp2568P568LcCccTc22AY.7.10.000225
ORF1ab/nsp2568P568LcCccTc22AY.9.10.000167
ORF1ab/nsp2568P568LcCccTc22AY.99.20.000184
ORF1ab/nsp2568P568LcCccTc22B.1.1.3260.003521
ORF1ab/nsp2568P568LcCccTc22B.1.1.390.001019
ORF1ab/nsp2568P568LcCccTc22B.1.1.630.000772
ORF1ab/nsp2568P568LcCccTc22B.1.177.520.003515
ORF1ab/nsp2568P568LcCccTc22B.1.177.570.000562
ORF1ab/nsp2568P568LcCccTc22B.1.177.600.000437
ORF1ab/nsp2568P568LcCccTc22B.1.177.750.002081
ORF1ab/nsp2568P568LcCccTc22B.1.214.10.04
ORF1ab/nsp2568P568LcCccTc22B.1.3330.021053
ORF1ab/nsp2568P568LcCccTc22B.1.4090.001563
ORF1ab/nsp2568P568LcCccTc22B.1.5950.000522
ORF1ab/nsp2568P568LcCccTc22B.30.001661
ORF1ab/nsp2568P568LcCccTc22C.350.001548
ORF1ab/nsp2568P568LcCccTc22D.20.00015
ORF1ab/nsp2568P568LcCccTc22P.70.008734
ORF1ab/nsp2568P568LcCccTc22R.10.00018
ORF1ab/nsp2568P568LcCccTc11A.20.000662
ORF1ab/nsp2568P568LcCccTc11AJ.10.045455
ORF1ab/nsp2568P568LcCccTc11AY.10.000396
ORF1ab/nsp2568P568LcCccTc11AY.1090.00074
ORF1ab/nsp2568P568LcCccTc11AY.1130.000142
ORF1ab/nsp2568P568LcCccTc11AY.130.000161
ORF1ab/nsp2568P568LcCccTc11AY.160.00038
ORF1ab/nsp2568P568LcCccTc11AY.220.002092
ORF1ab/nsp2568P568LcCccTc11AY.29.10.000221
ORF1ab/nsp2568P568LcCccTc11AY.300.000396
ORF1ab/nsp2568P568LcCccTc11AY.320.000532
ORF1ab/nsp2568P568LcCccTc11AY.330.000067
ORF1ab/nsp2568P568LcCccTc11AY.380.000499
ORF1ab/nsp2568P568LcCccTc11AY.4.10.000737
ORF1ab/nsp2568P568LcCccTc11AY.4.2.10.000149
ORF1ab/nsp2568P568LcCccTc11AY.4.50.000107
ORF1ab/nsp2568P568LcCccTc11AY.540.000095
ORF1ab/nsp2568P568LcCccTc11AY.550.000917
ORF1ab/nsp2568P568LcCccTc11AY.650.000533
ORF1ab/nsp2568P568LcCccTc11AY.75.10.00018
ORF1ab/nsp2568P568LcCccTc11AY.80.000606
ORF1ab/nsp2568P568LcCccTc11AY.870.000833
ORF1ab/nsp2568P568LcCccTc11AY.920.000287
ORF1ab/nsp2568P568LcCccTc11B.1.1.1570.000913
ORF1ab/nsp2568P568LcCccTc11B.1.1.1810.004545
ORF1ab/nsp2568P568LcCccTc11B.1.1.1920.002309
ORF1ab/nsp2568P568LcCccTc11B.1.1.2410.00207
ORF1ab/nsp2568P568LcCccTc11B.1.1.2840.000107
ORF1ab/nsp2568P568LcCccTc11B.1.1.2980.000862
ORF1ab/nsp2568P568LcCccTc11B.1.1.3120.001912
ORF1ab/nsp2568P568LcCccTc11B.1.1.3440.010753
ORF1ab/nsp2568P568LcCccTc11B.1.1.3510.002793
ORF1ab/nsp2568P568LcCccTc11B.1.1.370.000193
ORF1ab/nsp2568P568LcCccTc11B.1.1.3720.000689
ORF1ab/nsp2568P568LcCccTc11B.1.1.4160.000905
ORF1ab/nsp2568P568LcCccTc11B.1.1.4330.001425
ORF1ab/nsp2568P568LcCccTc11B.1.1.4860.001577
ORF1ab/nsp2568P568LcCccTc11B.1.1110.001175
ORF1ab/nsp2568P568LcCccTc11B.1.160.150.00495
ORF1ab/nsp2568P568LcCccTc11B.1.177.160.000664
ORF1ab/nsp2568P568LcCccTc11B.1.177.440.000519
ORF1ab/nsp2568P568LcCccTc11B.1.177.580.001332
ORF1ab/nsp2568P568LcCccTc11B.1.177.670.007634
ORF1ab/nsp2568P568LcCccTc11B.1.177.730.000566
ORF1ab/nsp2568P568LcCccTc11B.1.177.80.000752
ORF1ab/nsp2568P568LcCccTc11B.1.1990.004132
ORF1ab/nsp2568P568LcCccTc11B.1.2220.001692
ORF1ab/nsp2568P568LcCccTc11B.1.2320.000537
ORF1ab/nsp2568P568LcCccTc11B.1.2390.001221
ORF1ab/nsp2568P568LcCccTc11B.1.258.110.000396
ORF1ab/nsp2568P568LcCccTc11B.1.258.40.003448
ORF1ab/nsp2568P568LcCccTc11B.1.3020.013333
ORF1ab/nsp2568P568LcCccTc11B.1.3370.005587
ORF1ab/nsp2568P568LcCccTc11B.1.3490.000715
ORF1ab/nsp2568P568LcCccTc11B.1.3690.000285
ORF1ab/nsp2568P568LcCccTc11B.1.5250.000113
ORF1ab/nsp2568P568LcCccTc11B.1.5510.00129
ORF1ab/nsp2568P568LcCccTc11B.1.5640.000426
ORF1ab/nsp2568P568LcCccTc11B.1.5760.000907
ORF1ab/nsp2568P568LcCccTc11B.1.6230.000536
ORF1ab/nsp2568P568LcCccTc11B.1.88.10.004808
ORF1ab/nsp2568P568LcCccTc11B.400.000364
ORF1ab/nsp2568P568LcCccTc11B.6.60.000889
ORF1ab/nsp2568P568LcCccTc11C.160.00106
ORF1ab/nsp2568P568LcCccTc11C.36.10.004149
ORF1ab/nsp2568P568LcCccTc11N.50.001767
ORF1ab/nsp2568P568LcCccTc11Q.10.000126