CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 568 & Codon = Tcc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2568P568SP748SnonsynCccTcc5735710.996512507-2509

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2568P568SCccTcc571573All0.000109
ORF1ab/nsp2568P568SCccTcc115115B.1.3510.003419
ORF1ab/nsp2568P568SCccTcc111111B.1.4270.005605
ORF1ab/nsp2568P568SCccTcc5252B.1.617.20.000196
ORF1ab/nsp2568P568SCccTcc5151B.1.1.70.000046
ORF1ab/nsp2568P568SCccTcc4646B.1.4220.037368
ORF1ab/nsp2568P568SCccTcc1919AY.40.00003
ORF1ab/nsp2568P568SCccTcc1515B.1.5260.000353
ORF1ab/nsp2568P568SCccTcc1414AY.4.20.000304
ORF1ab/nsp2568P568SCccTcc1414B.1.10.000254
ORF1ab/nsp2568P568SCccTcc1414B.1.2580.000932
ORF1ab/nsp2568P568SCccTcc1313AY.30.000129
ORF1ab/nsp2568P568SCccTcc1011P.10.000158
ORF1ab/nsp2568P568SCccTcc88B.10.000073
ORF1ab/nsp2568P568SCccTcc88B.1.4290.000188
ORF1ab/nsp2568P568SCccTcc66AY.440.000037
ORF1ab/nsp2568P568SCccTcc55AY.250.00003
ORF1ab/nsp2568P568SCccTcc55B.1.1.2860.014493
ORF1ab/nsp2568P568SCccTcc33AY.1030.000019
ORF1ab/nsp2568P568SCccTcc33B.1.1770.00004
ORF1ab/nsp2568P568SCccTcc33B.1.177.860.00055
ORF1ab/nsp2568P568SCccTcc33R.10.00027
ORF1ab/nsp2568P568SCccTcc22AY.1200.000074
ORF1ab/nsp2568P568SCccTcc22AY.290.000032
ORF1ab/nsp2568P568SCccTcc22AY.360.000296
ORF1ab/nsp2568P568SCccTcc22AY.390.000049
ORF1ab/nsp2568P568SCccTcc22AY.39.20.003082
ORF1ab/nsp2568P568SCccTcc22AY.430.000009
ORF1ab/nsp2568P568SCccTcc22AY.50.000041
ORF1ab/nsp2568P568SCccTcc22AY.5.30.000675
ORF1ab/nsp2568P568SCccTcc22AY.610.00021
ORF1ab/nsp2568P568SCccTcc22AY.75.10.000361
ORF1ab/nsp2568P568SCccTcc22B.1.1.4340.000697
ORF1ab/nsp2568P568SCccTcc22B.1.1.5190.000079
ORF1ab/nsp2568P568SCccTcc22B.1.20.000018
ORF1ab/nsp2568P568SCccTcc11A.23.10.000704
ORF1ab/nsp2568P568SCccTcc11AY.10.000396
ORF1ab/nsp2568P568SCccTcc11AY.1190.000035
ORF1ab/nsp2568P568SCccTcc11AY.260.000028
ORF1ab/nsp2568P568SCccTcc11AY.470.000031
ORF1ab/nsp2568P568SCccTcc11AY.570.000656
ORF1ab/nsp2568P568SCccTcc11AY.680.000274
ORF1ab/nsp2568P568SCccTcc11AY.840.000437
ORF1ab/nsp2568P568SCccTcc11AY.930.000273
ORF1ab/nsp2568P568SCccTcc11B.1.1.2220.000204
ORF1ab/nsp2568P568SCccTcc11B.1.2060.000816
ORF1ab/nsp2568P568SCccTcc11B.1.2210.000071
ORF1ab/nsp2568P568SCccTcc11B.1.2340.000132
ORF1ab/nsp2568P568SCccTcc11B.1.36.290.000517
ORF1ab/nsp2568P568SCccTcc11B.1.5230.002451
ORF1ab/nsp2568P568SCccTcc11B.1.5330.009615
ORF1ab/nsp2568P568SCccTcc11B.1.5960.000087
ORF1ab/nsp2568P568SCccTcc11B.1.6210.000089
ORF1ab/nsp2568P568SCccTcc11B.1.6350.017544
ORF1ab/nsp2568P568SCccTcc11B.1.6370.000073
ORF1ab/nsp2568P568SCccTcc11B.40.002208
ORF1ab/nsp2568P568SCccTcc11B.610.005747
ORF1ab/nsp2568P568SCccTcc11C.360.000911
ORF1ab/nsp2568P568SCccTcc11C.370.000116
ORF1ab/nsp2568P568SCccTcc11P.1.10.000318
ORF1ab/nsp2568P568SCccTcc11P.20.000187
ORF1ab/nsp2568P568SCccTcc11Q.40.000455