CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 567 & Codon = ctC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2567L567LL747LsynctTctC3192490.7805642504-2506

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2567L567LctTctC249319All0.000048
ORF1ab/nsp2567L567LctTctC5050AY.39.10.001981
ORF1ab/nsp2567L567LctTctC4750B.1.1.70.000042
ORF1ab/nsp2567L567LctTctC732B.1.617.20.000026
ORF1ab/nsp2567L567LctTctC2021P.10.000315
ORF1ab/nsp2567L567LctTctC1618AY.40.000025
ORF1ab/nsp2567L567LctTctC1315B.1.10.000236
ORF1ab/nsp2567L567LctTctC1111B.1.20.000097
ORF1ab/nsp2567L567LctTctC1111B.1.36.170.005435
ORF1ab/nsp2567L567LctTctC77AY.250.000042
ORF1ab/nsp2567L567LctTctC26AY.440.000012
ORF1ab/nsp2567L567LctTctC56B.1.1770.000066
ORF1ab/nsp2567L567LctTctC25B.1.3510.000059
ORF1ab/nsp2567L567LctTctC44AY.4.50.00043
ORF1ab/nsp2567L567LctTctC34AY.430.000013
ORF1ab/nsp2567L567LctTctC44B.1.1.540.012085
ORF1ab/nsp2567L567LctTctC44B.1.1600.000125
ORF1ab/nsp2567L567LctTctC33AY.1200.000112
ORF1ab/nsp2567L567LctTctC13AY.30.00001
ORF1ab/nsp2567L567LctTctC23B.10.000018
ORF1ab/nsp2567L567LctTctC33B.1.160.280.008772
ORF1ab/nsp2567L567LctTctC22AY.260.000057
ORF1ab/nsp2567L567LctTctC22AY.390.000049
ORF1ab/nsp2567L567LctTctC22AY.470.000062
ORF1ab/nsp2567L567LctTctC22AY.600.001876
ORF1ab/nsp2567L567LctTctC22B.1.4290.000047
ORF1ab/nsp2567L567LctTctC11A.2.20.001689
ORF1ab/nsp2567L567LctTctC11AY.130.000161
ORF1ab/nsp2567L567LctTctC11AY.160.00038
ORF1ab/nsp2567L567LctTctC11AY.420.00004
ORF1ab/nsp2567L567LctTctC11AY.840.000437
ORF1ab/nsp2567L567LctTctC11AY.980.000079
ORF1ab/nsp2567L567LctTctC11AY.99.20.000092
ORF1ab/nsp2567L567LctTctC11B.1.1.10.000327
ORF1ab/nsp2567L567LctTctC11B.1.1.3720.000689
ORF1ab/nsp2567L567LctTctC11B.1.1.4170.002703
ORF1ab/nsp2567L567LctTctC11B.1.1.5190.00004
ORF1ab/nsp2567L567LctTctC11B.1.1700.00431
ORF1ab/nsp2567L567LctTctC11B.1.177.100.000878
ORF1ab/nsp2567L567LctTctC11B.1.177.400.005155
ORF1ab/nsp2567L567LctTctC11B.1.2340.000132
ORF1ab/nsp2567L567LctTctC11B.1.2410.000812
ORF1ab/nsp2567L567LctTctC11B.1.3110.000275
ORF1ab/nsp2567L567LctTctC11B.1.4270.00005
ORF1ab/nsp2567L567LctTctC11B.1.5770.000687
ORF1ab/nsp2567L567LctTctC11B.1.5820.000491
ORF1ab/nsp2567L567LctTctC11B.1.617.10.000129
ORF1ab/nsp2567L567LctTctC11B.30.000831
ORF1ab/nsp2567L567LctTctC11C.370.000116
ORF1ab/nsp2567L567LctTctC11P.1.160.000374